| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G15930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G15930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15910 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.0 x 10-11 | 285 | 20 | 93.44% | 305 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15910 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.20662 x 10-1 | 60 | 22 | 17 | 3 | 73.17% | 15.00% | 82 | 20 | TAIR8 |
Avg. embryo expression (dissected): '88.1356' Avg. embryo expression (LCM): '82.5601' |
||||
| AT2G15910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.9097 x 10-1 | 49 | 10 | 11 | 12 | 83.05% | 52.17% | 59 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.290659' Avg. expression score for this sample: '55.0579' Avg. expression score in LCM sample: '33.4525' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G15910 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.91699 x 10-1 | 67 | 18 | 20 | 24 | 78.82% | 54.55% | 85 | 44 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.290659' Avg. expression score for this sample: '89.8128' Avg. expression score in LCM sample: '33.4525' Tissue used: 'full endosperm' |
|||||
| AT2G15910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.62389 x 10-1 | 16 | 10 | 61.54% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15910 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.166 x 10-3 | 144 | 102 | 58.54% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 187 | 0.00% | 187 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.573 x 10-3 | 0 | 12 | 0.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6 x 10-16 | 133 | 0 | 235 | 0 | 100.00% | 0.00% | 133 | 235 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.9e-17' Avg. expression score for this sample: '1807.85' Avg. expression score in LCM sample: '550.54' Tissue used: 'full endosperm' |
|||||
| AT2G15900 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.867 x 10-3 | 36 | 0 | 8 | 0 | 100.00% | 0.00% | 36 | 8 | TAIR8 |
Avg. embryo expression (dissected): '917.688' Avg. embryo expression (LCM): '487.675' |
||||
| AT2G15900 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 254 | 0 | 100.00% | 254 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.3865 x 10-2 | 45 | 0 | 46 | 0 | 100.00% | 0.00% | 45 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.9e-17' Avg. expression score for this sample: '985.642' Avg. expression score in LCM sample: '550.54' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G15890 | MEE14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.9694 x 10-1 | 55 | 21 | 25 | 32 | 72.37% | 56.14% | 76 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.752747' Avg. expression score for this sample: '69.1194' Avg. expression score in LCM sample: '40.6397' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G15890 | MEE14 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.8269 x 10-2 | 68 | 31 | 14 | 6 | 68.69% | 30.00% | 99 | 20 | TAIR8 |
Avg. embryo expression (dissected): '68.4837' Avg. embryo expression (LCM): '42.3475' |
|||
| AT2G15890 | MEE14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.51673 x 10-1 | 49 | 26 | 45 | 114 | 65.33% | 71.70% | 75 | 159 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.752747' Avg. expression score for this sample: '91.5838' Avg. expression score in LCM sample: '40.6397' Tissue used: 'full endosperm' |
||||
| AT2G15890 | MEE14 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.06 x 10-4 | 58 | 7 | 89.23% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15890 | MEE14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.0895 x 10-1 | 26 | 10 | 72.22% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15890 | MEE14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.81868 x 10-1 | 9 | 1 | 90.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.59701 x 10-1 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.46926 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15880 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.214 x 10-3 | 1 | 8 | 11.11% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15880 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 12 | 11 | 4 | 2 | 52.17% | 33.33% | 23 | 6 | TAIR8 |
Avg. embryo expression (dissected): '121.998' Avg. embryo expression (LCM): '24.753' |
||||
| AT2G15880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.37917 x 10-1 | 5 | 6 | 9 | 36 | 45.45% | 80.00% | 11 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '97.4871' Avg. expression score in LCM sample: '24.9277' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G15880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.87272 x 10-1 | 14 | 18 | 2 | 11 | 43.75% | 84.62% | 32 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '41.0488' Avg. expression score in LCM sample: '24.9277' Tissue used: 'full endosperm' |
|||||
| AT2G15860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '415.832' Avg. expression score in LCM sample: '146.171' Tissue used: 'full endosperm' |
||||||
| AT2G15860 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '246.843' Avg. embryo expression (LCM): '311.93' |
|||||
| AT2G15860 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.02797 x 10-1 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '201.165' Avg. expression score in LCM sample: '146.171' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G15860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.66667 x 10-1 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.05742 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.55919 x 10-1 | 7 | 8 | 46.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.04764 x 10-1 | 16 | 2 | 5 | 9 | 88.89% | 64.29% | 18 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '56.7106' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G15830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.35244' Avg. embryo expression (LCM): '0' |
|||||
| AT2G15830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.9304 x 10-1 | 63 | 38 | 8 | 19 | 62.38% | 70.37% | 101 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '134.15' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G15830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.51577 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15820 | OTP51 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-20 | 454 | 59 | 88.50% | 513 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15820 | OTP51 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.03611 x 10-1 | 260 | 227 | 64 | 50 | 53.39% | 43.86% | 487 | 114 | TAIR8 |
Avg. embryo expression (dissected): '161.71' Avg. embryo expression (LCM): '212.554' |
|||
| AT2G15820 | OTP51 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.69121 x 10-1 | 138 | 42 | 65 | 59 | 76.67% | 47.58% | 180 | 124 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.617473' Avg. expression score for this sample: '55.7963' Avg. expression score in LCM sample: '26.6767' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15820 | OTP51 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.90865 x 10-1 | 324 | 64 | 184 | 224 | 83.51% | 54.90% | 388 | 408 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.617473' Avg. expression score for this sample: '90.8095' Avg. expression score in LCM sample: '26.6767' Tissue used: 'full endosperm' |
||||
| AT2G15820 | OTP51 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.63376 x 10-1 | 26 | 13 | 66.67% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15820 | OTP51 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.3649 x 10-2 | 226 | 147 | 60.59% | 373 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15790 | SQN | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.496 x 10-3 | 379 | 106 | 78.14% | 485 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15790 | SQN | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.55346 x 10-1 | 85 | 36 | 70.25% | 121 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15790 | SQN | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.8 x 10-5 | 366 | 72 | 195 | 424 | 83.56% | 68.50% | 438 | 619 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003592' Avg. expression score for this sample: '172.353' Avg. expression score in LCM sample: '96.7417' Tissue used: 'full endosperm' |
||||
| AT2G15790 | SQN | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.30525 x 10-1 | 173 | 128 | 68 | 43 | 57.48% | 38.74% | 301 | 111 | TAIR8 |
Avg. embryo expression (dissected): '146.509' Avg. embryo expression (LCM): '217.942' |
|||
| AT2G15790 | SQN | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.4 x 10-9 | 1063 | 254 | 80.71% | 1317 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G15790 | SQN | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.0697 x 10-1 | 218 | 83 | 105 | 132 | 72.43% | 55.70% | 301 | 237 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003592' Avg. expression score for this sample: '126.761' Avg. expression score in LCM sample: '96.7417' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G15780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G15780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.19392' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G15780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.823488' Avg. embryo expression (LCM): '0' |
|||||
| AT2G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.00071' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.56031' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G15760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.33333 x 10-1 | 2 | 6 | 25.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 91 | 73 | 55.49% | 164 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '1.48449' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '1.48449' Tissue used: 'full endosperm' |
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| AT2G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 52 | 33 | 61.18% | 85 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-7 | 79 | 2 | 97.53% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.51186 x 10-1 | 10 | 4 | 4 | 2 | 71.43% | 33.33% | 14 | 6 | TAIR8 |
Avg. embryo expression (dissected): '60.2532' Avg. embryo expression (LCM): '59.8039' |
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| AT2G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.11392 x 10-1 | 9 | 8 | 8 | 7 | 52.94% | 46.67% | 17 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.304572' Avg. expression score for this sample: '41.8068' Avg. expression score in LCM sample: '38.3469' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.9322 x 10-2 | 43 | 4 | 19 | 46 | 91.49% | 70.77% | 47 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.304572' Avg. expression score for this sample: '85.9582' Avg. expression score in LCM sample: '38.3469' Tissue used: 'full endosperm' |
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| AT2G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.2127 x 10-2 | 5 | 7 | 41.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.562 x 10-3 | 28 | 1 | 96.55% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.42857 x 10-1 | 0 | 6 | 0.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G15710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15695 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 1 | 4 | 2 | 88.89% | 33.33% | 9 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.721181' Avg. expression score for this sample: '106.582' Avg. expression score in LCM sample: '26.4415' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15695 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 4 | 0 | 4 | 33.33% | 100.00% | 6 | 4 | TAIR8 |
Avg. embryo expression (dissected): '72.809' Avg. embryo expression (LCM): '30.869' |
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| AT2G15695 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.0764 x 10-1 | 46 | 9 | 42 | 44 | 83.64% | 51.16% | 55 | 86 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.721181' Avg. expression score for this sample: '222.404' Avg. expression score in LCM sample: '26.4415' Tissue used: 'full endosperm' |
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| AT2G15695 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-7 | 88 | 7 | 92.63% | 95 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15695 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.67896 x 10-1 | 11 | 12 | 47.83% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15695 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.17686 x 10-1 | 74 | 48 | 60.66% | 122 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.13514 x 10-1 | 51 | 22 | 69.86% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.68816 x 10-1 | 12 | 6 | 66.67% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.59718 x 10-1 | 93 | 27 | 77.50% | 120 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G15690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.54528 x 10-1 | 31 | 40 | 9 | 10 | 43.66% | 52.63% | 71 | 19 | TAIR8 |
Avg. embryo expression (dissected): '287.066' Avg. embryo expression (LCM): '344.884' |
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| AT2G15690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.04764 x 10-1 | 9 | 7 | 0 | 16 | 56.25% | 100.00% | 16 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.180139' Avg. expression score for this sample: '92.9729' Avg. expression score in LCM sample: '76.0764' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G15690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.58919 x 10-1 | 35 | 13 | 14 | 40 | 72.92% | 74.07% | 48 | 54 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.180139' Avg. expression score for this sample: '124.188' Avg. expression score in LCM sample: '76.0764' Tissue used: 'full endosperm' |
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| AT2G15680 | CML30 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '5.86258' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G15680 | CML30 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '5.64652' Avg. embryo expression (LCM): '3.89316' |