Displaying data sets 119301 - 119400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G16850 PIP2;8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16850 PIP2;8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 25 21 79 28.57% 79.00% 35 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00684'
Avg. expression score for this sample: '25.3815'
Avg. expression score in LCM sample: '5.08548'
Tissue used: 'full endosperm'
AT2G16850 PIP2;8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.6 x 10-5 13 46 12 18 22.03% 60.00% 59 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00684'
Avg. expression score for this sample: '53.9049'
Avg. expression score in LCM sample: '5.08548'
Tissue used: 'pure endosperm, no chalazal'
AT2G16850 PIP2;8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4 x 10-13 157 504 33 96 23.75% 74.42% 661 129 TAIR8 Avg. embryo expression (dissected): '762.938'
Avg. embryo expression (LCM): '635.539'
AT2G16835 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16835 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16835 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16835 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.236044'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.485608'
Avg. embryo expression (LCM): '0'
AT2G16810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.53456 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.30318 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.7802 13 4 4 10 76.47% 71.43% 17 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.261741'
Avg. expression score for this sample: '120.968'
Avg. expression score in LCM sample: '95.7128'
Tissue used: 'full endosperm'
AT2G16800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4762 x 10-2 4 13 6 6 23.53% 50.00% 17 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.261741'
Avg. expression score for this sample: '154.353'
Avg. expression score in LCM sample: '95.7128'
Tissue used: 'pure endosperm, no chalazal'
AT2G16800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 4 8 2 1 33.33% 33.33% 12 3 TAIR8 Avg. embryo expression (dissected): '417.883'
Avg. embryo expression (LCM): '338.052'
AT2G16790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '2.01421'
Avg. embryo expression (LCM): '3.12709'
AT2G16790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0741 x 10-2 4 0 0 10 100.00% 100.00% 4 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '25.0871'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '4.17165'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16780 MSI2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.4075 x 10-2 45 11 80.36% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16780 MSI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 84 55 24 74 60.43% 75.51% 139 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.585098'
Avg. expression score for this sample: '332.956'
Avg. expression score in LCM sample: '474.801'
Tissue used: 'pure endosperm, no chalazal'
AT2G16780 MSI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44088 x 10-1 54 22 67 96 71.05% 58.90% 76 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.585098'
Avg. expression score for this sample: '272.889'
Avg. expression score in LCM sample: '474.801'
Tissue used: 'full endosperm'
AT2G16780 MSI2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.48855 x 10-1 171 205 40 70 45.48% 63.64% 376 110 TAIR8 Avg. embryo expression (dissected): '869.295'
Avg. embryo expression (LCM): '1124.07'
AT2G16780 MSI2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7 x 10-5 123 130 48.62% 253 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16780 MSI2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6 x 10-7 138 24 85.19% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16770 bZIP23 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.90128 x 10-1 30 14 68.18% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16770 bZIP23 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.53192 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16770 bZIP23 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.14794 x 10-1 24 9 72.73% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16770 bZIP23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 19 6 33 48.65% 84.62% 37 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.607146'
Avg. expression score for this sample: '106.22'
Avg. expression score in LCM sample: '36.201'
Tissue used: 'full endosperm'
AT2G16770 bZIP23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.39752 x 10-1 8 16 8 25 33.33% 75.76% 24 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.607146'
Avg. expression score for this sample: '91.8883'
Avg. expression score in LCM sample: '36.201'
Tissue used: 'pure endosperm, no chalazal'
AT2G16770 bZIP23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45975 x 10-1 27 39 9 12 40.91% 57.14% 66 21 TAIR8 Avg. embryo expression (dissected): '188.222'
Avg. embryo expression (LCM): '152.009'
AT2G16760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35095 x 10-1 13 4 2 4 76.47% 66.67% 17 6 TAIR8 Avg. embryo expression (dissected): '153.4'
Avg. embryo expression (LCM): '164.342'
AT2G16760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0436 x 10-2 9 20 12 109 31.03% 90.08% 29 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012641'
Avg. expression score for this sample: '104.809'
Avg. expression score in LCM sample: '63.6714'
Tissue used: 'full endosperm'
AT2G16760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1321 x 10-2 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.8084 x 10-1 6 3 3 14 66.67% 82.35% 9 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012641'
Avg. expression score for this sample: '145.895'
Avg. expression score in LCM sample: '63.6714'
Tissue used: 'pure endosperm, no chalazal'
AT2G16760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.14799 x 10-1 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.09102 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.4529'
Avg. expression score in LCM sample: '.602615'
Tissue used: 'pure endosperm, no chalazal'
AT2G16750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.5948'
Avg. expression score in LCM sample: '.602615'
Tissue used: 'full endosperm'
AT2G16750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.40388'
Avg. embryo expression (LCM): '0'
AT2G16750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16740 UBC29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16740 UBC29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16740 UBC29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16740 UBC29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16740 UBC29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16740 UBC29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.27637'
Avg. embryo expression (LCM): '0'
AT2G16730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.32142'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.0403'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16720 MYB7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.33274 x 10-1 59 0 100.00% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16720 MYB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02211 x 10-1 7 2 1 14 77.78% 93.33% 9 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-23'
Avg. expression score for this sample: '20.6175'
Avg. expression score in LCM sample: '4.51226'
Tissue used: 'pure endosperm, no chalazal'
AT2G16720 MYB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1 x 10-23 77 8 2 212 90.59% 99.07% 85 214 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-23'
Avg. expression score for this sample: '152.061'
Avg. expression score in LCM sample: '4.51226'
Tissue used: 'full endosperm'
AT2G16720 MYB7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.18741'
Avg. embryo expression (LCM): '1.28097'
AT2G16720 MYB7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.20339 x 10-1 78 1 98.73% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16720 MYB7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9341 x 10-2 85 0 100.00% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.5127 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.73335 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2254 x 10-2 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.07283 x 10-1 17 7 1 14 70.83% 93.33% 24 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.348944'
Avg. expression score for this sample: '85.9767'
Avg. expression score in LCM sample: '20.871'
Tissue used: 'full endosperm'
AT2G16710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 4 5 10 66.67% 66.67% 12 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.348944'
Avg. expression score for this sample: '130.517'
Avg. expression score in LCM sample: '20.871'
Tissue used: 'pure endosperm, no chalazal'
AT2G16710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 2 8 0 3 20.00% 100.00% 10 3 TAIR8 Avg. embryo expression (dissected): '50.6205'
Avg. embryo expression (LCM): '49.0412'
AT2G16700 ADF5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.2728'
Avg. embryo expression (LCM): '18.5616'
AT2G16700 ADF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 2.30769 x 10-1 0 0 0 7 100.00% 0 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '31.2266'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16700 ADF5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16700 ADF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '2.22558'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16700 ADF5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 40 0 100.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16700 ADF5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16676 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16676 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16676 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.509538'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16676 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16676 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16676 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16668 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16668 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16668 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16668 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16668 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16668 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.8 x 10-9 180 2 57 4 98.90% 6.56% 182 61 TAIR8 Avg. embryo expression (dissected): '107.83'
Avg. embryo expression (LCM): '51.0255'
AT2G16660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-29 215 12 37 350 94.71% 90.44% 227 387 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-27'
Avg. expression score for this sample: '104.248'
Avg. expression score in LCM sample: '7.7605'
Tissue used: 'full endosperm'
AT2G16660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9 x 10-5 289 10 96.66% 299 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.8323 x 10-2 93 15 18 23 86.11% 56.10% 108 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-27'
Avg. expression score for this sample: '39.0134'
Avg. expression score in LCM sample: '7.7605'
Tissue used: 'pure endosperm, no chalazal'
AT2G16660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-20 937 9 99.05% 946 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.643 x 10-3 59 0 100.00% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'