Displaying data sets 119201 - 119300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G17000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.28498 x 10-1 175 77 69.44% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.04411 x 10-1 596 421 470 1145 58.60% 70.90% 1017 1615 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.133507'
Avg. expression score for this sample: '618.297'
Avg. expression score in LCM sample: '632.863'
Tissue used: 'pure endosperm, no chalazal'
AT2G16990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2667 x 10-1 30 19 22 34 61.22% 60.71% 49 56 TAIR8 Avg. embryo expression (dissected): '54.1671'
Avg. embryo expression (LCM): '10.1097'
AT2G16990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.244 x 10-3 523 315 283 919 62.41% 76.46% 838 1202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.133507'
Avg. expression score for this sample: '316.746'
Avg. expression score in LCM sample: '632.863'
Tissue used: 'full endosperm'
AT2G16990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-30 186 0 100.00% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 312 9 97.20% 321 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 2.30769 x 10-1 0 0 0 7 100.00% 0 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '7.3427'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.431807'
Avg. embryo expression (LCM): '1.45679'
AT2G16980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '1.93827'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16970 MEE15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16970 MEE15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16970 MEE15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.440571'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16970 MEE15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16970 MEE15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16970 MEE15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.102785'
Avg. expression score in LCM sample: '.911271'
Tissue used: 'full endosperm'
AT2G16960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.320424'
Avg. expression score in LCM sample: '.911271'
Tissue used: 'pure endosperm, no chalazal'
AT2G16960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16955 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16955 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16955 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16955 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16955 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16955 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16950 TRN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.1 x 10-14 736 167 309 866 81.51% 73.70% 903 1175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-08'
Avg. expression score for this sample: '258.863'
Avg. expression score in LCM sample: '226.936'
Tissue used: 'full endosperm'
AT2G16950 TRN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.09763 x 10-1 321 268 99 88 54.50% 47.06% 589 187 TAIR8 Avg. embryo expression (dissected): '203.913'
Avg. embryo expression (LCM): '310.561'
AT2G16950 TRN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.08778 x 10-1 447 141 210 227 76.02% 51.95% 588 437 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-08'
Avg. expression score for this sample: '188.586'
Avg. expression score in LCM sample: '226.936'
Tissue used: 'pure endosperm, no chalazal'
AT2G16950 TRN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2844 323 89.80% 3167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16950 TRN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.42578 x 10-1 2449 939 72.28% 3388 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16950 TRN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.422 x 10-3 174 35 83.25% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4054 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 1 5 62.50% 83.33% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282283'
Avg. expression score for this sample: '5956.82'
Avg. expression score in LCM sample: '760.235'
Tissue used: 'pure endosperm, no chalazal'
AT2G16940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 7 2 1 0 77.78% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '6598.93'
Avg. embryo expression (LCM): '2623.84'
AT2G16940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.77157 x 10-1 10 2 1 8 83.33% 88.89% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282283'
Avg. expression score for this sample: '2615.81'
Avg. expression score in LCM sample: '760.235'
Tissue used: 'full endosperm'
AT2G16940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.81111 x 10-1 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.08613 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.08817 x 10-1 24 4 85.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4896 x 10-2 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 3 11 21 66.67% 65.62% 9 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '365.922'
Avg. expression score in LCM sample: '111.895'
Tissue used: 'full endosperm'
AT2G16930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 1 66.67% 50.00% 3 2 TAIR8 Avg. embryo expression (dissected): '457.316'
Avg. embryo expression (LCM): '367.841'
AT2G16930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 1 4 60.00% 80.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '436.769'
Avg. expression score in LCM sample: '111.895'
Tissue used: 'pure endosperm, no chalazal'
AT2G16920 UBC23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.62596 x 10-1 390 247 200 591 61.22% 74.72% 637 791 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.4e-11'
Avg. expression score for this sample: '243.779'
Avg. expression score in LCM sample: '124.594'
Tissue used: 'pure endosperm, no chalazal'
AT2G16920 UBC23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.2822 x 10-1 286 390 103 153 42.31% 59.77% 676 256 TAIR8 Avg. embryo expression (dissected): '254.728'
Avg. embryo expression (LCM): '138.056'
AT2G16920 UBC23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.9 x 10-14 679 271 313 1202 71.47% 79.34% 950 1515 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.4e-11'
Avg. expression score for this sample: '313.523'
Avg. expression score in LCM sample: '124.594'
Tissue used: 'full endosperm'
AT2G16920 UBC23 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-28 1342 202 86.92% 1544 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16920 UBC23 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1684 164 91.13% 1848 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16920 UBC23 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.1 x 10-13 221 18 92.47% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16910 AMS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.64664 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16910 AMS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7839 x 10-2 164 20 45 38 89.13% 45.78% 184 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.105367'
Avg. expression score for this sample: '39.5019'
Avg. expression score in LCM sample: '46.0045'
Tissue used: 'full endosperm'
AT2G16910 AMS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.28355 x 10-1 38 15 16 6 71.70% 27.27% 53 22 TAIR8 Avg. embryo expression (dissected): '38.7694'
Avg. embryo expression (LCM): '6.6686'
AT2G16910 AMS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.71098 x 10-1 234 19 119 57 92.49% 32.39% 253 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.105367'
Avg. expression score for this sample: '100.084'
Avg. expression score in LCM sample: '46.0045'
Tissue used: 'pure endosperm, no chalazal'
AT2G16910 AMS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-7 66 2 97.06% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16910 AMS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7232 x 10-2 13 14 48.15% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.507 x 10-3 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-7 98 4 96.08% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 47 14 77.05% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.448 x 10-3 121 27 44 116 81.76% 72.50% 148 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000412'
Avg. expression score for this sample: '103.83'
Avg. expression score in LCM sample: '38.4203'
Tissue used: 'pure endosperm, no chalazal'
AT2G16900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.2282 x 10-2 38 16 5 4 70.37% 44.44% 54 9 TAIR8 Avg. embryo expression (dissected): '34.8568'
Avg. embryo expression (LCM): '37.8139'
AT2G16900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0181 x 10-2 75 24 25 83 75.76% 76.85% 99 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000412'
Avg. expression score for this sample: '103.161'
Avg. expression score in LCM sample: '38.4203'
Tissue used: 'full endosperm'
AT2G16890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-10 35 0 0 49 100.00% 100.00% 35 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-15'
Avg. expression score for this sample: '26.2584'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 0 0 0 4 100.00% 0 4 TAIR8 Avg. embryo expression (dissected): '3.18589'
Avg. embryo expression (LCM): '0'
AT2G16890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.6 x 10-5 10 0 1 43 100.00% 97.73% 10 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-15'
Avg. expression score for this sample: '21.2951'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 90 1 98.90% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5 x 10-7 17 9 65.38% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16881 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16881 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G16881 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G16881 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G16881 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16881 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-9 206 21 90.75% 227 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.65634 x 10-1 175 54 76.42% 229 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.51236 x 10-1 21 4 84.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8119 x 10-1 84 42 53 157 66.67% 74.76% 126 210 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205671'
Avg. expression score for this sample: '423.221'
Avg. expression score in LCM sample: '117.613'
Tissue used: 'full endosperm'
AT2G16880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 20 21 5 4 48.78% 44.44% 41 9 TAIR8 Avg. embryo expression (dissected): '202.155'
Avg. embryo expression (LCM): '209.929'
AT2G16880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 35 10 17 23 77.78% 57.50% 45 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205671'
Avg. expression score for this sample: '203.406'
Avg. expression score in LCM sample: '117.613'
Tissue used: 'pure endosperm, no chalazal'
AT2G16870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.27337'
Avg. expression score in LCM sample: '3.98313'
Tissue used: 'pure endosperm, no chalazal'
AT2G16870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 3 6 3 1 33.33% 25.00% 9 4 TAIR8 Avg. embryo expression (dissected): '8.61707'
Avg. embryo expression (LCM): '6.04068'
AT2G16870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 1 6 6 88.89% 50.00% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.34282'
Avg. expression score in LCM sample: '3.98313'
Tissue used: 'full endosperm'
AT2G16870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.79033 x 10-1 23 10 69.70% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.18 x 10-4 36 0 100.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.44748 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 26 270 8.78% 296 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 884 51 1399 244 94.55% 14.85% 935 1643 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '777.023'
Avg. expression score in LCM sample: '100.019'
Tissue used: 'full endosperm'
AT2G16860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.1 x 10-9 309 60 85 13 83.74% 13.27% 369 98 TAIR8 Avg. embryo expression (dissected): '329.31'
Avg. embryo expression (LCM): '404.21'
AT2G16860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.5 x 10-9 308 47 321 92 86.76% 22.28% 355 413 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '357.321'
Avg. expression score in LCM sample: '100.019'
Tissue used: 'pure endosperm, no chalazal'
AT2G16860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1427 78 94.82% 1505 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 228 1282 15.10% 1510 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16850 PIP2;8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G16850 PIP2;8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.54317 x 10-1 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'