Displaying data sets 118901 - 119000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G17470 ALMT6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17470 ALMT6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17450 RHA3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17450 RHA3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17450 RHA3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17450 RHA3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '58.0402'
Avg. embryo expression (LCM): '16.728'
AT2G17450 RHA3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.9821'
Avg. expression score in LCM sample: '53.3828'
Tissue used: 'pure endosperm, no chalazal'
AT2G17450 RHA3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '61.0531'
Avg. expression score in LCM sample: '53.3828'
Tissue used: 'full endosperm'
AT2G17442 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.58053 x 10-1 92 18 66 55 83.64% 45.45% 110 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.930768'
Avg. expression score for this sample: '126.344'
Avg. expression score in LCM sample: '31.189'
Tissue used: 'full endosperm'
AT2G17442 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.972 x 10-2 26 8 3 1 76.47% 25.00% 34 4 TAIR8 Avg. embryo expression (dissected): '42.3697'
Avg. embryo expression (LCM): '97.2034'
AT2G17442 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44184 x 10-1 35 5 12 13 87.50% 52.00% 40 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.930768'
Avg. expression score for this sample: '55.1027'
Avg. expression score in LCM sample: '31.189'
Tissue used: 'pure endosperm, no chalazal'
AT2G17442 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.94 x 10-4 34 2 94.44% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17442 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.95629 x 10-1 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17442 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.59101 x 10-1 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17440 PIRL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17440 PIRL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0271 x 10-2 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17440 PIRL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 3 3 4 80.00% 57.14% 15 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.034'
Avg. expression score in LCM sample: '26.7649'
Tissue used: 'pure endosperm, no chalazal'
AT2G17440 PIRL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 4 7 5 77.78% 41.67% 18 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.7413'
Avg. expression score in LCM sample: '26.7649'
Tissue used: 'full endosperm'
AT2G17440 PIRL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 2 0 2 66.67% 100.00% 6 2 TAIR8 Avg. embryo expression (dissected): '19.3329'
Avg. embryo expression (LCM): '21.0607'
AT2G17440 PIRL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.486 x 10-3 29 2 93.55% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17430 MLO7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17430 MLO7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17430 MLO7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17430 MLO7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.951915'
Avg. embryo expression (LCM): '0'
AT2G17430 MLO7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.455706'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17430 MLO7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.14839'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17420 NTRA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1963 590 664 2304 76.89% 77.63% 2553 2968 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-20'
Avg. expression score for this sample: '474.935'
Avg. expression score in LCM sample: '339.639'
Tissue used: 'full endosperm'
AT2G17420 NTRA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0747 x 10-2 1731 2121 369 509 44.94% 57.97% 3852 878 TAIR8 Avg. embryo expression (dissected): '813.287'
Avg. embryo expression (LCM): '701.12'
AT2G17420 NTRA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.02676 x 10-1 1156 757 413 1137 60.43% 73.35% 1913 1550 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-20'
Avg. expression score for this sample: '421.76'
Avg. expression score in LCM sample: '339.639'
Tissue used: 'pure endosperm, no chalazal'
AT2G17420 NTRA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6598 1389 82.61% 7987 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17420 NTRA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.5 x 10-5 555 141 79.74% 696 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17420 NTRA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.17287 x 10-1 7069 2478 74.04% 9547 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9 x 10-12 2234 748 74.92% 2982 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6 x 10-5 222 56 79.86% 278 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 421 220 229 473 65.68% 67.38% 641 702 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.15337'
Avg. expression score for this sample: '340.381'
Avg. expression score in LCM sample: '178.095'
Tissue used: 'pure endosperm, no chalazal'
AT2G17410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02516 x 10-1 1353 494 910 1675 73.25% 64.80% 1847 2585 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.15337'
Avg. expression score for this sample: '533.474'
Avg. expression score in LCM sample: '178.095'
Tissue used: 'full endosperm'
AT2G17410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.9179 x 10-2 635 538 162 162 54.13% 50.00% 1173 324 TAIR8 Avg. embryo expression (dissected): '571.479'
Avg. embryo expression (LCM): '479.336'
AT2G17410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3673 727 83.48% 4400 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17390 AKR2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-6 398 67 85.59% 465 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17390 AKR2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.53835 x 10-1 56 13 81.16% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17390 AKR2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.54322 x 10-1 341 138 71.19% 479 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17390 AKR2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.14148 x 10-1 126 96 16 23 56.76% 58.97% 222 39 TAIR8 Avg. embryo expression (dissected): '272.656'
Avg. embryo expression (LCM): '158.941'
AT2G17390 AKR2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.9396 x 10-2 167 47 56 111 78.04% 66.47% 214 167 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000042'
Avg. expression score for this sample: '282.105'
Avg. expression score in LCM sample: '107.324'
Tissue used: 'pure endosperm, no chalazal'
AT2G17390 AKR2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.28 x 10-4 212 48 132 344 81.54% 72.27% 260 476 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000042'
Avg. expression score for this sample: '247.474'
Avg. expression score in LCM sample: '107.324'
Tissue used: 'full endosperm'
AT2G17380 AP19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.69 x 10-4 320 58 154 302 84.66% 66.23% 378 456 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006336'
Avg. expression score for this sample: '181.355'
Avg. expression score in LCM sample: '108.735'
Tissue used: 'full endosperm'
AT2G17380 AP19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.13397 x 10-1 72 90 13 20 44.44% 60.61% 162 33 TAIR8 Avg. embryo expression (dissected): '88.6127'
Avg. embryo expression (LCM): '129.404'
AT2G17380 AP19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.77828 x 10-1 142 69 60 108 67.30% 64.29% 211 168 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006336'
Avg. expression score for this sample: '125.848'
Avg. expression score in LCM sample: '108.735'
Tissue used: 'pure endosperm, no chalazal'
AT2G17380 AP19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 723 48 93.77% 771 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17380 AP19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.18037 x 10-1 513 169 75.22% 682 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17380 AP19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.64463 x 10-1 60 18 76.92% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17370 HMG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.22427 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17370 HMG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7353 x 10-2 15 15 50.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17370 HMG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.84541 x 10-1 5 0 2 7 100.00% 77.78% 5 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438537'
Avg. expression score for this sample: '136.559'
Avg. expression score in LCM sample: '105.237'
Tissue used: 'pure endosperm, no chalazal'
AT2G17370 HMG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.40045 x 10-1 26 4 21 33 86.67% 61.11% 30 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438537'
Avg. expression score for this sample: '116.183'
Avg. expression score in LCM sample: '105.237'
Tissue used: 'full endosperm'
AT2G17370 HMG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 3 3 4 0 50.00% 0.00% 6 4 TAIR8 Avg. embryo expression (dissected): '211.114'
Avg. embryo expression (LCM): '124.003'
AT2G17370 HMG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4119 x 10-2 24 1 96.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.8 x 10-22 1284 339 79.11% 1623 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0 x 10-7 1475 556 72.62% 2031 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.60154 x 10-1 239 121 66.39% 360 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.36473 x 10-1 832 922 221 258 47.43% 53.86% 1754 479 TAIR8 Avg. embryo expression (dissected): '3802.36'
Avg. embryo expression (LCM): '3652.98'
AT2G17360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.6143 x 10-2 463 313 205 435 59.66% 67.97% 776 640 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.531992'
Avg. expression score for this sample: '1753.17'
Avg. expression score in LCM sample: '755.429'
Tissue used: 'pure endosperm, no chalazal'
AT2G17360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.30518 x 10-1 476 229 287 621 67.52% 68.39% 705 908 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.531992'
Avg. expression score for this sample: '1392.17'
Avg. expression score in LCM sample: '755.429'
Tissue used: 'full endosperm'
AT2G17350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.97319 x 10-1 20 4 9 24 83.33% 72.73% 24 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.269093'
Avg. expression score for this sample: '560.177'
Avg. expression score in LCM sample: '261.123'
Tissue used: 'full endosperm'
AT2G17350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 3 1 1 57.14% 50.00% 7 2 TAIR8 Avg. embryo expression (dissected): '406.807'
Avg. embryo expression (LCM): '505.382'
AT2G17350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 1 7 62.50% 87.50% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.269093'
Avg. expression score for this sample: '493.373'
Avg. expression score in LCM sample: '261.123'
Tissue used: 'pure endosperm, no chalazal'
AT2G17350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8124 x 10-2 48 4 92.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 48 14 77.42% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6511 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 3 3 3 72.73% 50.00% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213375'
Avg. expression score for this sample: '13.4925'
Avg. expression score in LCM sample: '8.77466'
Tissue used: 'pure endosperm, no chalazal'
AT2G17340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.07708 x 10-1 16 10 2 30 61.54% 93.75% 26 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213375'
Avg. expression score for this sample: '30.6303'
Avg. expression score in LCM sample: '8.77466'
Tissue used: 'full endosperm'
AT2G17340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 12 11 0 3 52.17% 100.00% 23 3 TAIR8 Avg. embryo expression (dissected): '20.8438'
Avg. embryo expression (LCM): '13.1237'
AT2G17340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3553 x 10-2 28 2 93.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '53.0115'
Avg. embryo expression (LCM): '28.3321'
AT2G17320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.4253'
Avg. expression score in LCM sample: '11.0528'
Tissue used: 'pure endosperm, no chalazal'
AT2G17320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.7067'
Avg. expression score in LCM sample: '11.0528'
Tissue used: 'full endosperm'
AT2G17310 SON1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.35642 x 10-1 27 2 48 51 93.10% 51.52% 29 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149551'
Avg. expression score for this sample: '32.1135'
Avg. expression score in LCM sample: '194.277'
Tissue used: 'full endosperm'
AT2G17310 SON1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 3 0 100.00% 0.00% 2 3 TAIR8 Avg. embryo expression (dissected): '4.00942'
Avg. embryo expression (LCM): '1.0298'
AT2G17310 SON1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.62407 x 10-1 97 25 71 56 79.51% 44.09% 122 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149551'
Avg. expression score for this sample: '73.1738'
Avg. expression score in LCM sample: '194.277'
Tissue used: 'pure endosperm, no chalazal'
AT2G17310 SON1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.97475 x 10-1 19 7 73.08% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17310 SON1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.201 x 10-3 152 160 48.72% 312 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17310 SON1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.0149 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17305 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17305 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 293 199 59.55% 492 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.445307'
Avg. expression score in LCM sample: '1.24932'
Tissue used: 'pure endosperm, no chalazal'
AT2G17305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.24932'
Tissue used: 'full endosperm'
AT2G17305 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17305 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 105 33 76.09% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2978 x 10-2 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.88457 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.64644 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '5.11203'
Avg. embryo expression (LCM): '0'
AT2G17300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.63104 x 10-1 9 1 9 4 90.00% 30.77% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.415093'
Avg. expression score for this sample: '47.4388'
Avg. expression score in LCM sample: '60.4672'
Tissue used: 'pure endosperm, no chalazal'
AT2G17300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.24321 x 10-1 16 8 6 36 66.67% 85.71% 24 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.415093'
Avg. expression score for this sample: '129.864'
Avg. expression score in LCM sample: '60.4672'
Tissue used: 'full endosperm'
AT2G17295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17295 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'