Displaying data sets 118801 - 118900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G17630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9432 x 10-1 54 31 63.53% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.03827 x 10-1 50 18 32 55 73.53% 63.22% 68 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780827'
Avg. expression score for this sample: '51.1943'
Avg. expression score in LCM sample: '38.729'
Tissue used: 'full endosperm'
AT2G17630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.75004 x 10-1 37 18 22 27 67.27% 55.10% 55 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780827'
Avg. expression score for this sample: '41.5106'
Avg. expression score in LCM sample: '38.729'
Tissue used: 'pure endosperm, no chalazal'
AT2G17630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.64457 x 10-1 122 81 20 11 60.10% 35.48% 203 31 TAIR8 Avg. embryo expression (dissected): '140.811'
Avg. embryo expression (LCM): '292.753'
AT2G17630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-5 54 5 91.53% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17620 CYCB2;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17620 CYCB2;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17620 CYCB2;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17620 CYCB2;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.81818 x 10-1 0 6 0 0 0.00% 6 0 TAIR8 Avg. embryo expression (dissected): '57.579'
Avg. embryo expression (LCM): '58.0081'
AT2G17620 CYCB2;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.4611'
Avg. expression score in LCM sample: '62.3927'
Tissue used: 'full endosperm'
AT2G17620 CYCB2;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.5321'
Avg. expression score in LCM sample: '62.3927'
Tissue used: 'pure endosperm, no chalazal'
AT2G17600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 0 3 1 100.00% 25.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.1108'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.176515'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.72628'
Avg. embryo expression (LCM): '0'
AT2G17590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-30 625 52 92.32% 677 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.39674 x 10-1 19 10 65.52% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0 x 10-10 113 137 45.20% 250 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.31422 x 10-1 108 92 45 25 54.00% 35.71% 200 70 TAIR8 Avg. embryo expression (dissected): '51.1027'
Avg. embryo expression (LCM): '55.4838'
AT2G17580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.24043 x 10-1 208 33 114 110 86.31% 49.11% 241 224 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.679285'
Avg. expression score for this sample: '37.782'
Avg. expression score in LCM sample: '17.8139'
Tissue used: 'full endosperm'
AT2G17580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 89 25 37 35 78.07% 48.61% 114 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.679285'
Avg. expression score for this sample: '23.7036'
Avg. expression score in LCM sample: '17.8139'
Tissue used: 'pure endosperm, no chalazal'
AT2G17570 cPT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 45 16 15 14 73.77% 48.28% 61 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.129156'
Avg. expression score for this sample: '22.8432'
Avg. expression score in LCM sample: '33.3349'
Tissue used: 'pure endosperm, no chalazal'
AT2G17570 cPT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.501 x 10-3 38 83 14 13 31.40% 48.15% 121 27 TAIR8 Avg. embryo expression (dissected): '42.5128'
Avg. embryo expression (LCM): '50.7367'
AT2G17570 cPT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8718 x 10-2 164 45 39 70 78.47% 64.22% 209 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.129156'
Avg. expression score for this sample: '59.4321'
Avg. expression score in LCM sample: '33.3349'
Tissue used: 'full endosperm'
AT2G17570 cPT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4 x 10-5 19 29 39.58% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17570 cPT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.3 x 10-11 303 32 90.45% 335 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17570 cPT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5641 x 10-2 139 84 62.33% 223 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17560 HMGB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.02975 x 10-1 110 32 77.46% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17560 HMGB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.977 x 10-3 60 9 42 122 86.96% 74.39% 69 164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014612'
Avg. expression score for this sample: '159.761'
Avg. expression score in LCM sample: '40.9778'
Tissue used: 'full endosperm'
AT2G17560 HMGB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 3 12 7 88.89% 36.84% 27 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014612'
Avg. expression score for this sample: '115.219'
Avg. expression score in LCM sample: '40.9778'
Tissue used: 'pure endosperm, no chalazal'
AT2G17560 HMGB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.8743 x 10-2 58 31 7 5 65.17% 41.67% 89 12 TAIR8 Avg. embryo expression (dissected): '227.982'
Avg. embryo expression (LCM): '438.407'
AT2G17560 HMGB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3796 x 10-2 91 14 86.67% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17560 HMGB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17556 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17556 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17556 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17556 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17556 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17556 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17550 TRM26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.13649 x 10-1 1 3 4 4 25.00% 50.00% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.434478'
Avg. expression score for this sample: '44.6561'
Avg. expression score in LCM sample: '37.9647'
Tissue used: 'pure endosperm, no chalazal'
AT2G17550 TRM26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.75006'
Avg. embryo expression (LCM): '2.16008'
AT2G17550 TRM26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 5 10 50.00% 66.67% 4 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.434478'
Avg. expression score for this sample: '63.4309'
Avg. expression score in LCM sample: '37.9647'
Tissue used: 'full endosperm'
AT2G17550 TRM26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17550 TRM26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17550 TRM26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.76114 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.22882 x 10-1 31 23 57.41% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.42288 x 10-1 35 5 25 16 87.50% 39.02% 40 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014432'
Avg. expression score for this sample: '31.9938'
Avg. expression score in LCM sample: '11.7142'
Tissue used: 'full endosperm'
AT2G17540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.22 x 10-4 13 13 24 8 50.00% 25.00% 26 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014432'
Avg. expression score for this sample: '40.7639'
Avg. expression score in LCM sample: '11.7142'
Tissue used: 'pure endosperm, no chalazal'
AT2G17540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38262 x 10-1 19 7 15 7 73.08% 31.82% 26 22 TAIR8 Avg. embryo expression (dissected): '57.6202'
Avg. embryo expression (LCM): '32.0244'
AT2G17540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.85714 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5 x 10-14 69 1 98.57% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '41.7813'
Avg. embryo expression (LCM): '56.4257'
AT2G17530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '82.9676'
Avg. expression score in LCM sample: '38.8907'
Tissue used: 'full endosperm'
AT2G17530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '63.8882'
Avg. expression score in LCM sample: '38.8907'
Tissue used: 'pure endosperm, no chalazal'
AT2G17525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.8669'
Avg. expression score in LCM sample: '21.8411'
Tissue used: 'pure endosperm, no chalazal'
AT2G17525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '104.506'
Avg. embryo expression (LCM): '96.6006'
AT2G17525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '85.771'
Avg. expression score in LCM sample: '21.8411'
Tissue used: 'full endosperm'
AT2G17525 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17525 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17525 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17520 IRE1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17520 IRE1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '372.928'
Avg. expression score in LCM sample: '178.991'
Tissue used: 'full endosperm'
AT2G17520 IRE1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '227.167'
Avg. expression score in LCM sample: '178.991'
Tissue used: 'pure endosperm, no chalazal'
AT2G17520 IRE1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '226.536'
Avg. embryo expression (LCM): '80.3498'
AT2G17520 IRE1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17520 IRE1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17510 EMB2763 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.48725 x 10-1 28 12 70.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17510 EMB2763 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.054 x 10-3 229 34 87.07% 263 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17510 EMB2763 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.38645 x 10-1 144 48 75.00% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17510 EMB2763 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9898 x 10-2 150 111 27 35 57.47% 56.45% 261 62 TAIR8 Avg. embryo expression (dissected): '102.524'
Avg. embryo expression (LCM): '94.9303'
AT2G17510 EMB2763 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-5 113 32 47 199 77.93% 80.89% 145 246 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '75.7764'
Avg. expression score in LCM sample: '36.0687'
Tissue used: 'full endosperm'
AT2G17510 EMB2763 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3156 x 10-2 121 41 38 119 74.69% 75.80% 162 157 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '59.4485'
Avg. expression score in LCM sample: '36.0687'
Tissue used: 'pure endosperm, no chalazal'
AT2G17500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.50842'
Avg. expression score in LCM sample: '7.93687'
Tissue used: 'pure endosperm, no chalazal'
AT2G17500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.47644'
Avg. embryo expression (LCM): '2.26054'
AT2G17500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.46591'
Avg. expression score in LCM sample: '7.93687'
Tissue used: 'full endosperm'
AT2G17500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17480 MLO8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17480 MLO8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.013 x 10-2 24 3 5 30 88.89% 85.71% 27 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008238'
Avg. expression score for this sample: '212.308'
Avg. expression score in LCM sample: '42.477'
Tissue used: 'full endosperm'
AT2G17480 MLO8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 5 1 0 2 83.33% 100.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008238'
Avg. expression score for this sample: '232.62'
Avg. expression score in LCM sample: '42.477'
Tissue used: 'pure endosperm, no chalazal'
AT2G17480 MLO8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '239.921'
Avg. embryo expression (LCM): '86.9933'
AT2G17480 MLO8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17480 MLO8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6175 x 10-2 45 1 97.83% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17470 ALMT6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17470 ALMT6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17470 ALMT6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17470 ALMT6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'