Displaying data sets 118701 - 118800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G17770 BZIP27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.26614'
Avg. embryo expression (LCM): '1.394'
AT2G17770 BZIP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.865464'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17770 BZIP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.45191'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17770 BZIP27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1388 31 97.82% 1419 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.90441 x 10-1 91 25 50 89 78.45% 64.03% 116 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.7e-22'
Avg. expression score for this sample: '124.593'
Avg. expression score in LCM sample: '102.827'
Tissue used: 'pure endosperm, no chalazal'
AT2G17760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.29617 x 10-1 54 38 9 12 58.70% 57.14% 92 21 TAIR8 Avg. embryo expression (dissected): '73.3733'
Avg. embryo expression (LCM): '52.8465'
AT2G17760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8 x 10-24 542 80 125 535 87.14% 81.06% 622 660 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.7e-22'
Avg. expression score for this sample: '319.016'
Avg. expression score in LCM sample: '102.827'
Tissue used: 'full endosperm'
AT2G17760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-16 877 64 93.20% 941 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.12427 x 10-1 87 25 77.68% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17750 NIP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17750 NIP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3058 x 10-2 924 242 79.25% 1166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17750 NIP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.343 x 10-3 3 0 21 106 100.00% 83.46% 3 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.215633'
Avg. expression score for this sample: '20.313'
Avg. expression score in LCM sample: '87.2321'
Tissue used: 'full endosperm'
AT2G17750 NIP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.77622 x 10-1 24 34 6 28 41.38% 82.35% 58 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.215633'
Avg. expression score for this sample: '25.9929'
Avg. expression score in LCM sample: '87.2321'
Tissue used: 'pure endosperm, no chalazal'
AT2G17750 NIP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-5 92 82 52.87% 174 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17750 NIP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '2.02143'
Avg. embryo expression (LCM): '0'
AT2G17740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.18749'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17730 NIP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17730 NIP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.71429 x 10-1 44 0 100.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17730 NIP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0625 x 10-1 38 0 100.00% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17730 NIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010942'
Avg. expression score for this sample: '16.9964'
Avg. expression score in LCM sample: '9.1568'
Tissue used: 'pure endosperm, no chalazal'
AT2G17730 NIP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 4 1 0 1 80.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '25.7123'
Avg. embryo expression (LCM): '16.5145'
AT2G17730 NIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.901 x 10-3 9 0 0 13 100.00% 100.00% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010942'
Avg. expression score for this sample: '29.6779'
Avg. expression score in LCM sample: '9.1568'
Tissue used: 'full endosperm'
AT2G17723 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '177.798'
Avg. expression score in LCM sample: '216.309'
Tissue used: 'full endosperm'
AT2G17723 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '172.974'
Avg. expression score in LCM sample: '216.309'
Tissue used: 'pure endosperm, no chalazal'
AT2G17723 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.478'
Avg. embryo expression (LCM): '0'
AT2G17723 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17723 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17723 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17720 P4H5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17720 P4H5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17720 P4H5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '53.793'
Avg. embryo expression (LCM): '19.8174'
AT2G17720 P4H5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '109.415'
Avg. expression score in LCM sample: '15.4622'
Tissue used: 'full endosperm'
AT2G17720 P4H5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '46.8031'
Avg. expression score in LCM sample: '15.4622'
Tissue used: 'pure endosperm, no chalazal'
AT2G17720 P4H5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.28875 x 10-1 723 5 99.31% 728 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.91696 x 10-1 258 1 99.61% 259 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.88704 x 10-1 388 7 98.23% 395 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6 x 10-21 106 1 0 89 99.07% 100.00% 107 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '289.502'
Avg. expression score in LCM sample: '24.281'
Tissue used: 'pure endosperm, no chalazal'
AT2G17710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 7 3 1 4 70.00% 80.00% 10 5 TAIR8 Avg. embryo expression (dissected): '29.8425'
Avg. embryo expression (LCM): '6.91978'
AT2G17710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 561 9 4 659 98.42% 99.40% 570 663 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1183.36'
Avg. expression score in LCM sample: '24.281'
Tissue used: 'full endosperm'
AT2G17705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.47699 x 10-1 7 5 0 20 58.33% 100.00% 12 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085899'
Avg. expression score for this sample: '6.84957'
Avg. expression score in LCM sample: '3.63039'
Tissue used: 'full endosperm'
AT2G17705 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 1 3 83.33% 75.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085899'
Avg. expression score for this sample: '2.86269'
Avg. expression score in LCM sample: '3.63039'
Tissue used: 'pure endosperm, no chalazal'
AT2G17705 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 1 4 0 0 20.00% 5 0 TAIR8 Avg. embryo expression (dissected): '1.79432'
Avg. embryo expression (LCM): '6.20394'
AT2G17705 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.40515 x 10-1 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17705 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.79851 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17705 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17700 STY8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.81 x 10-4 539 144 78.92% 683 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17700 STY8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.19237 x 10-1 161 71 69.40% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17700 STY8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.71087 x 10-1 140 149 45 44 48.44% 49.44% 289 89 TAIR8 Avg. embryo expression (dissected): '84.6225'
Avg. embryo expression (LCM): '73.3672'
AT2G17700 STY8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1 x 10-7 646 202 280 741 76.18% 72.58% 848 1021 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-06'
Avg. expression score for this sample: '178.261'
Avg. expression score in LCM sample: '47.3273'
Tissue used: 'full endosperm'
AT2G17700 STY8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.5532 x 10-1 161 98 102 251 62.16% 71.10% 259 353 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-06'
Avg. expression score for this sample: '94.9487'
Avg. expression score in LCM sample: '47.3273'
Tissue used: 'pure endosperm, no chalazal'
AT2G17700 STY8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 618 51 92.38% 669 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17695 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4172 x 10-2 30 2 93.75% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17695 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.841 x 10-3 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17695 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.49 x 10-4 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 9 2 15 47.06% 88.24% 17 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230052'
Avg. expression score for this sample: '61.4774'
Avg. expression score in LCM sample: '19.9451'
Tissue used: 'pure endosperm, no chalazal'
AT2G17695 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00105 x 10-1 16 5 4 1 76.19% 20.00% 21 5 TAIR8 Avg. embryo expression (dissected): '56.7241'
Avg. embryo expression (LCM): '83.8159'
AT2G17695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.43931 x 10-1 17 12 4 40 58.62% 90.91% 29 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230052'
Avg. expression score for this sample: '77.9046'
Avg. expression score in LCM sample: '19.9451'
Tissue used: 'full endosperm'
AT2G17690 SDC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 3.6 x 10-7 12 1 1 65 92.31% 98.48% 13 66 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '1.3e-24'
Avg. expression score for this sample: '23.2478'
Avg. expression score in LCM sample: '96.433'
Tissue used: 'full endosperm'
AT2G17690 SDC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 3.7 x 10-18 112 0 1 54 100.00% 98.18% 112 55 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '1.3e-24'
Avg. expression score for this sample: '94.5148'
Avg. expression score in LCM sample: '96.433'
Tissue used: 'pure endosperm, no chalazal'
AT2G17690 SDC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '4.18997'
Avg. embryo expression (LCM): '1.98426'
AT2G17690 SDC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'MEG affected by met1'
AT2G17690 SDC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.85853 x 10-1 111 3 97.37% 114 TAIR8 Mutant effect: 'MEG affected by met1'
AT2G17690 SDC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 33 87 27.50% 120 TAIR8 Mutant effect: 'MEG affected by met1'
AT2G17680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.187164'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 434 176 71.15% 610 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0 x 10-5 583 145 80.08% 728 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.54655 x 10-1 26 5 83.87% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.06185 x 10-1 84 41 28 97 67.20% 77.60% 125 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078762'
Avg. expression score for this sample: '52.7889'
Avg. expression score in LCM sample: '25.2363'
Tissue used: 'pure endosperm, no chalazal'
AT2G17670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.10784 x 10-1 124 132 21 37 48.44% 63.79% 256 58 TAIR8 Avg. embryo expression (dissected): '97.7518'
Avg. embryo expression (LCM): '133.51'
AT2G17670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.63645 x 10-1 158 97 44 176 61.96% 80.00% 255 220 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078762'
Avg. expression score for this sample: '89.5709'
Avg. expression score in LCM sample: '25.2363'
Tissue used: 'full endosperm'
AT2G17660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.83145 x 10-1 236 40 142 174 85.51% 55.06% 276 316 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '450.352'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.41755 x 10-1 136 23 96 56 85.53% 36.84% 159 152 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '319.902'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.1627 x 10-2 18 3 2 1 85.71% 33.33% 21 3 TAIR8 Avg. embryo expression (dissected): '30.3482'
Avg. embryo expression (LCM): '0'
AT2G17660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.43845 x 10-1 28 16 63.64% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.567 x 10-3 19 24 44.19% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.24709 x 10-1 17 12 58.62% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6 x 10-6 58 4 93.55% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.9722 x 10-2 15 13 53.57% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.22 x 10-4 113 44 18 18 71.97% 50.00% 157 36 TAIR8 Avg. embryo expression (dissected): '97.2942'
Avg. embryo expression (LCM): '57.7569'
AT2G17650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7907 x 10-2 248 61 116 203 80.26% 63.64% 309 319 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.349243'
Avg. expression score for this sample: '141.958'
Avg. expression score in LCM sample: '61.5255'
Tissue used: 'full endosperm'
AT2G17650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.58951 x 10-1 119 30 87 79 79.87% 47.59% 149 166 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.349243'
Avg. expression score for this sample: '129.433'
Avg. expression score in LCM sample: '61.5255'
Tissue used: 'pure endosperm, no chalazal'
AT2G17650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.8 x 10-14 200 18 91.74% 218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17640 ATSERAT3;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-18 341 21 94.20% 362 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17640 ATSERAT3;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.52226 x 10-1 18 8 69.23% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17640 ATSERAT3;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-5 167 23 87.89% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17640 ATSERAT3;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 110 69 32 91 61.45% 73.98% 179 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004645'
Avg. expression score for this sample: '137.345'
Avg. expression score in LCM sample: '26.4122'
Tissue used: 'pure endosperm, no chalazal'
AT2G17640 ATSERAT3;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 53 46 21 16 53.54% 43.24% 99 37 TAIR8 Avg. embryo expression (dissected): '88.0575'
Avg. embryo expression (LCM): '30.6932'
AT2G17640 ATSERAT3;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.26 x 10-4 155 25 63 171 86.11% 73.08% 180 234 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004645'
Avg. expression score for this sample: '96.6876'
Avg. expression score in LCM sample: '26.4122'
Tissue used: 'full endosperm'