Displaying data sets 118601 - 118700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G17920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.43963'
Avg. expression score in LCM sample: '2.7926'
Tissue used: 'pure endosperm, no chalazal'
AT2G17920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17900 SDG37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17900 SDG37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.21253 x 10-1 5 9 7 22 35.71% 75.86% 14 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.845179'
Avg. expression score for this sample: '12.3215'
Avg. expression score in LCM sample: '3.85085'
Tissue used: 'full endosperm'
AT2G17900 SDG37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.37986 x 10-1 5 6 1 6 45.45% 85.71% 11 7 TAIR8 Avg. embryo expression (dissected): '14.056'
Avg. embryo expression (LCM): '12.32'
AT2G17900 SDG37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.34224 x 10-1 26 8 76.47% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17900 SDG37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.34614 x 10-1 4 1 1 12 80.00% 92.31% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.845179'
Avg. expression score for this sample: '9.32519'
Avg. expression score in LCM sample: '3.85085'
Tissue used: 'pure endosperm, no chalazal'
AT2G17900 SDG37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.32139 x 10-1 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17890 CPK16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17890 CPK16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.609112'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17890 CPK16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.340753'
Avg. embryo expression (LCM): '0'
AT2G17890 CPK16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17890 CPK16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.604677'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17890 CPK16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5188 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.318 x 10-3 2 8 20.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.35369 x 10-1 24 10 6 13 70.59% 68.42% 34 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.860601'
Avg. expression score for this sample: '131.415'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'pure endosperm, no chalazal'
AT2G17880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.97369 x 10-1 8 19 8 10 29.63% 55.56% 27 18 TAIR8 Avg. embryo expression (dissected): '149.131'
Avg. embryo expression (LCM): '59.6156'
AT2G17880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 73 45 34 89 61.86% 72.36% 118 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.860601'
Avg. expression score for this sample: '242.319'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'full endosperm'
AT2G17880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.10442 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17870 CSP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-12 520 115 81.89% 635 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17870 CSP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.34 x 10-4 340 167 113 432 67.06% 79.27% 507 545 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100237'
Avg. expression score for this sample: '1866.82'
Avg. expression score in LCM sample: '1617.36'
Tissue used: 'full endosperm'
AT2G17870 CSP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.30841 x 10-1 531 316 326 720 62.69% 68.83% 847 1046 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100237'
Avg. expression score for this sample: '5106.03'
Avg. expression score in LCM sample: '1617.36'
Tissue used: 'pure endosperm, no chalazal'
AT2G17870 CSP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.5 x 10-6 506 148 77.37% 654 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17870 CSP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9637 x 10-2 194 62 75.78% 256 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17870 CSP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.86442 x 10-1 554 530 201 200 51.11% 49.88% 1084 401 TAIR8 Avg. embryo expression (dissected): '6252.53'
Avg. embryo expression (LCM): '2128.45'
AT2G17860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.57508 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 3 0 3 40.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780788'
Avg. expression score for this sample: '6.93304'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 6 2 9 33.33% 81.82% 9 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780788'
Avg. expression score for this sample: '12.9221'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64734 x 10-1 3 0 1 10 100.00% 90.91% 3 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '3.07879'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 2 3 57.14% 60.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '4.62151'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.15987 x 10-1 8 1 6 1 88.89% 14.29% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '21.5022'
Avg. expression score in LCM sample: '3.13066'
Tissue used: 'pure endosperm, no chalazal'
AT2G17845 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.794492'
Avg. embryo expression (LCM): '0'
AT2G17845 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 6 0 0 5 100.00% 100.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '9.06228'
Avg. expression score in LCM sample: '3.13066'
Tissue used: 'full endosperm'
AT2G17845 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17845 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17840 ERD7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3416 625 84.53% 4041 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17840 ERD7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1759 345 83.60% 2104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17840 ERD7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.67 x 10-4 2399 1210 66.47% 3609 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17840 ERD7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.81118 x 10-1 11276 3964 8862 14158 73.99% 61.50% 15240 23020 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-21'
Avg. expression score for this sample: '11330.2'
Avg. expression score in LCM sample: '648.516'
Tissue used: 'pure endosperm, no chalazal'
AT2G17840 ERD7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.7 x 10-17 547 196 286 370 73.62% 56.40% 743 656 TAIR8 Avg. embryo expression (dissected): '780.961'
Avg. embryo expression (LCM): '87.9854'
AT2G17840 ERD7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 9445 2695 4131 9136 77.80% 68.86% 12140 13267 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-21'
Avg. expression score for this sample: '6411.35'
Avg. expression score in LCM sample: '648.516'
Tissue used: 'full endosperm'
AT2G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.91269 x 10-1 53 23 21 60 69.74% 74.07% 76 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.312029'
Avg. expression score for this sample: '107.554'
Avg. expression score in LCM sample: '32.6882'
Tissue used: 'full endosperm'
AT2G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78716 x 10-1 18 3 5 4 85.71% 44.44% 21 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.312029'
Avg. expression score for this sample: '39.245'
Avg. expression score in LCM sample: '32.6882'
Tissue used: 'pure endosperm, no chalazal'
AT2G17830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.87614 x 10-1 238 73 76.53% 311 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.24733 x 10-1 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.39132 x 10-1 19 14 6 9 57.58% 60.00% 33 15 TAIR8 Avg. embryo expression (dissected): '49.4502'
Avg. embryo expression (LCM): '62.165'
AT2G17830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4061 x 10-2 210 52 80.15% 262 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17820 HK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.64286 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17820 HK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.30551'
Avg. embryo expression (LCM): '9.98407'
AT2G17820 HK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17820 HK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 2 1 66.67% 33.33% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '59.3505'
Avg. expression score in LCM sample: '8.02506'
Tissue used: 'full endosperm'
AT2G17820 HK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.5069'
Avg. expression score in LCM sample: '8.02506'
Tissue used: 'pure endosperm, no chalazal'
AT2G17820 HK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17800 ARAC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.28 x 10-4 57 2 96.61% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17800 ARAC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.93959 x 10-1 16 4 13 28 80.00% 68.29% 20 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.126777'
Avg. expression score for this sample: '65.0011'
Avg. expression score in LCM sample: '66.5963'
Tissue used: 'pure endosperm, no chalazal'
AT2G17800 ARAC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.03634 x 10-1 21 16 2 9 56.76% 81.82% 37 11 TAIR8 Avg. embryo expression (dissected): '71.8326'
Avg. embryo expression (LCM): '103.822'
AT2G17800 ARAC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17800 ARAC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.33421 x 10-1 19 13 7 47 59.38% 87.04% 32 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.126777'
Avg. expression score for this sample: '113.069'
Avg. expression score in LCM sample: '66.5963'
Tissue used: 'full endosperm'
AT2G17800 ARAC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1061 x 10-2 34 2 94.44% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17790 VPS35A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.10861 x 10-1 71 12 85.54% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17790 VPS35A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17790 VPS35A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.2397 x 10-2 17 1 5 20 94.44% 80.00% 18 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.030255'
Avg. expression score for this sample: '164.242'
Avg. expression score in LCM sample: '145.245'
Tissue used: 'pure endosperm, no chalazal'
AT2G17790 VPS35A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.74862 x 10-1 18 12 4 7 60.00% 63.64% 30 11 TAIR8 Avg. embryo expression (dissected): '178.473'
Avg. embryo expression (LCM): '163.789'
AT2G17790 VPS35A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.50806 x 10-1 41 12 31 84 77.36% 73.04% 53 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.030255'
Avg. expression score for this sample: '205.327'
Avg. expression score in LCM sample: '145.245'
Tissue used: 'full endosperm'
AT2G17790 VPS35A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.008 x 10-3 71 5 93.42% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17787 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.58804 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17787 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.52023 x 10-1 17 0 5 5 100.00% 50.00% 17 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.260002'
Avg. expression score for this sample: '207.782'
Avg. expression score in LCM sample: '63.4215'
Tissue used: 'full endosperm'
AT2G17787 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 1 100.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.260002'
Avg. expression score for this sample: '137.329'
Avg. expression score in LCM sample: '63.4215'
Tissue used: 'pure endosperm, no chalazal'
AT2G17787 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.94023 x 10-1 11 6 64.71% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17787 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.05882 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17787 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 2 3 3 1 40.00% 25.00% 5 4 TAIR8 Avg. embryo expression (dissected): '121.854'
Avg. embryo expression (LCM): '72.5383'
AT2G17785 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G17785 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17785 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G17785 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.445164'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17785 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17785 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17780 MCA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.38177 x 10-1 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17780 MCA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.23077 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17780 MCA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.425 x 10-3 3 6 0 51 33.33% 100.00% 9 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004849'
Avg. expression score for this sample: '20.4802'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'full endosperm'
AT2G17780 MCA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 4 0 1 20.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '9.21625'
Avg. embryo expression (LCM): '0'
AT2G17780 MCA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9158 x 10-2 35 0 100.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G17780 MCA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004849'
Avg. expression score for this sample: '9.29688'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'pure endosperm, no chalazal'
AT2G17770 BZIP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.865464'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G17770 BZIP27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.26614'
Avg. embryo expression (LCM): '1.394'