Displaying data sets 117501 - 117600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G19620 NDL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '49.625'
Avg. expression score in LCM sample: '23.6489'
Tissue used: 'pure endosperm, no chalazal'
AT2G19620 NDL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '65.6687'
Avg. expression score in LCM sample: '23.6489'
Tissue used: 'full endosperm'
AT2G19620 NDL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19620 NDL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-5 8 89 8.25% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.53982'
Avg. expression score in LCM sample: '11.1116'
Tissue used: 'pure endosperm, no chalazal'
AT2G19610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.32587 x 10-1 47 36 56.63% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.871775'
Avg. embryo expression (LCM): '0'
AT2G19610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.46376'
Avg. expression score in LCM sample: '11.1116'
Tissue used: 'full endosperm'
AT2G19600 KEA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.443 x 10-2 23 6 5 25 79.31% 83.33% 29 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.175589'
Avg. expression score for this sample: '14.1464'
Avg. expression score in LCM sample: '13.4633'
Tissue used: 'full endosperm'
AT2G19600 KEA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.38937 x 10-1 63 11 85.14% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19600 KEA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19600 KEA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 9 6 19 62.50% 76.00% 24 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.175589'
Avg. expression score for this sample: '13.0308'
Avg. expression score in LCM sample: '13.4633'
Tissue used: 'pure endosperm, no chalazal'
AT2G19600 KEA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 17 7 9 48.48% 56.25% 33 16 TAIR8 Avg. embryo expression (dissected): '20.7444'
Avg. embryo expression (LCM): '14.3796'
AT2G19600 KEA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.33 x 10-4 140 11 92.72% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19590 ACO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19590 ACO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.4183'
Avg. embryo expression (LCM): '13.94'
AT2G19590 ACO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19590 ACO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.618'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G19590 ACO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19590 ACO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.86899'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G19582 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.958'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G19582 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.9937'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G19582 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.44462'
Avg. embryo expression (LCM): '22.7185'
AT2G19582 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19582 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19582 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19580 TET2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-8 123 0 100.00% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19580 TET2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.8325 x 10-2 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19580 TET2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Avg. embryo expression (dissected): '26.7536'
Avg. embryo expression (LCM): '34.7747'
AT2G19580 TET2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 4 4 85.71% 50.00% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088316'
Avg. expression score for this sample: '42.0796'
Avg. expression score in LCM sample: '40.6985'
Tissue used: 'pure endosperm, no chalazal'
AT2G19580 TET2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.098 x 10-2 44 0 13 13 100.00% 50.00% 44 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088316'
Avg. expression score for this sample: '134.255'
Avg. expression score in LCM sample: '40.6985'
Tissue used: 'full endosperm'
AT2G19580 TET2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19570 CDA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.49996 x 10-1 408 7 98.31% 415 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19570 CDA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 411 26 15 379 94.05% 96.19% 437 394 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2733.77'
Avg. expression score in LCM sample: '185.164'
Tissue used: 'pure endosperm, no chalazal'
AT2G19570 CDA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.24286 x 10-1 1533 45 97.15% 1578 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19570 CDA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.2 x 10-9 74 41 23 116 64.35% 83.45% 115 139 TAIR8 Avg. embryo expression (dissected): '773.074'
Avg. embryo expression (LCM): '214.588'
AT2G19570 CDA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1024 11 27 955 98.94% 97.25% 1035 982 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3907.44'
Avg. expression score in LCM sample: '185.164'
Tissue used: 'full endosperm'
AT2G19570 CDA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-15 3269 13 99.60% 3282 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19560 EER5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19560 EER5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.9207'
Avg. expression score in LCM sample: '29.7633'
Tissue used: 'full endosperm'
AT2G19560 EER5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19560 EER5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19560 EER5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.1248'
Avg. expression score in LCM sample: '29.7633'
Tissue used: 'pure endosperm, no chalazal'
AT2G19560 EER5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '34.097'
Avg. embryo expression (LCM): '23.6729'
AT2G19550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.94637'
Avg. embryo expression (LCM): '0'
AT2G19550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.70553'
Avg. expression score in LCM sample: '1.46979'
Tissue used: 'full endosperm'
AT2G19550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.522051'
Avg. expression score in LCM sample: '1.46979'
Tissue used: 'pure endosperm, no chalazal'
AT2G19550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-21 231 14 94.29% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.87056 x 10-1 47 22 38 45 68.12% 54.22% 69 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.252555'
Avg. expression score for this sample: '108.98'
Avg. expression score in LCM sample: '50.4285'
Tissue used: 'pure endosperm, no chalazal'
AT2G19540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.74392 x 10-1 79 22 42 31 78.22% 42.47% 101 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.252555'
Avg. expression score for this sample: '104.411'
Avg. expression score in LCM sample: '50.4285'
Tissue used: 'full endosperm'
AT2G19540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.52593 x 10-1 72 49 25 12 59.50% 32.43% 121 37 TAIR8 Avg. embryo expression (dissected): '175.51'
Avg. embryo expression (LCM): '181.61'
AT2G19540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 17 10 62.96% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 75 46 61.98% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3 x 10-4 51 3 94.44% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.34827 x 10-1 17 13 8 8 56.67% 50.00% 30 16 TAIR8 Avg. embryo expression (dissected): '22.5074'
Avg. embryo expression (LCM): '20.4077'
AT2G19530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.64299 x 10-1 36 14 10 19 72.00% 65.52% 50 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.302529'
Avg. expression score for this sample: '23.275'
Avg. expression score in LCM sample: '2.66032'
Tissue used: 'pure endosperm, no chalazal'
AT2G19530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.52271 x 10-1 45 10 16 29 81.82% 64.44% 55 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.302529'
Avg. expression score for this sample: '19.7888'
Avg. expression score in LCM sample: '2.66032'
Tissue used: 'full endosperm'
AT2G19530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.50308 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-5 70 4 94.59% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19520 FVE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.89 x 10-4 201 48 80.72% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19520 FVE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.14147 x 10-1 79 26 75.24% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19520 FVE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.4431 x 10-1 146 87 65 165 62.66% 71.74% 233 230 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.094892'
Avg. expression score for this sample: '344.623'
Avg. expression score in LCM sample: '96.727'
Tissue used: 'pure endosperm, no chalazal'
AT2G19520 FVE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.63969 x 10-1 121 39 75.62% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19520 FVE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.30494 x 10-1 201 256 43 47 43.98% 52.22% 457 90 TAIR8 Avg. embryo expression (dissected): '504.275'
Avg. embryo expression (LCM): '568.464'
AT2G19520 FVE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8322 x 10-2 230 73 115 254 75.91% 68.83% 303 369 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.094892'
Avg. expression score for this sample: '242.157'
Avg. expression score in LCM sample: '96.727'
Tissue used: 'full endosperm'
AT2G19510 LBD8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G19510 LBD8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 21 10 67.74% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19510 LBD8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19510 LBD8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G19510 LBD8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G19510 LBD8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 97 46 67.83% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19500 CKX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 383 45 89.49% 428 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19500 CKX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G19500 CKX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19500 CKX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3215 x 10-2 9 0 1 15 100.00% 93.75% 9 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03263'
Avg. expression score for this sample: '12.3641'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G19500 CKX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7 x 10-6 325 312 51.02% 637 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19500 CKX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 1 2 80.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03263'
Avg. expression score for this sample: '4.19265'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G19490 RECA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.39854 x 10-1 33 0 17 6 100.00% 26.09% 33 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221459'
Avg. expression score for this sample: '14.6566'
Avg. expression score in LCM sample: '7.11379'
Tissue used: 'pure endosperm, no chalazal'
AT2G19490 RECA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.053 x 10-2 41 0 40 5 100.00% 11.11% 41 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221459'
Avg. expression score for this sample: '18.9056'
Avg. expression score in LCM sample: '7.11379'
Tissue used: 'full endosperm'
AT2G19490 RECA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7727 x 10-2 69 10 25 0 87.34% 0.00% 79 25 TAIR8 Avg. embryo expression (dissected): '41.0827'
Avg. embryo expression (LCM): '75.1631'
AT2G19490 RECA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.69 x 10-4 2 15 11.76% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19490 RECA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9 x 10-8 0 20 0.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19490 RECA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-8 42 0 100.00% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19480 NAP1;2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.27723 x 10-1 737 141 83.94% 878 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19480 NAP1;2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-10 732 257 74.01% 989 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19480 NAP1;2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.55147 x 10-1 878 906 206 266 49.22% 56.36% 1784 472 TAIR8 Avg. embryo expression (dissected): '1998.93'
Avg. embryo expression (LCM): '1842.08'
AT2G19480 NAP1;2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 2451 664 541 3389 78.68% 86.23% 3115 3930 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3141.15'
Avg. expression score in LCM sample: '639.609'
Tissue used: 'pure endosperm, no chalazal'
AT2G19480 NAP1;2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 850 210 252 1208 80.19% 82.74% 1060 1460 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2618.34'
Avg. expression score in LCM sample: '639.609'
Tissue used: 'full endosperm'
AT2G19480 NAP1;2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0 x 10-6 189 78 70.79% 267 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19470 ckl5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19470 ckl5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 3 7 80.00% 70.00% 5 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.103234'
Avg. expression score for this sample: '222.87'
Avg. expression score in LCM sample: '99.5784'
Tissue used: 'pure endosperm, no chalazal'
AT2G19470 ckl5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.4427 x 10-2 86 40 68.25% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G19470 ckl5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '175.515'
Avg. embryo expression (LCM): '103.37'
AT2G19470 ckl5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4312 x 10-2 11 6 2 28 64.71% 93.33% 17 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.103234'
Avg. expression score for this sample: '229.57'
Avg. expression score in LCM sample: '99.5784'
Tissue used: 'full endosperm'
AT2G19470 ckl5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.04955 x 10-1 43 8 84.31% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'