| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G19790 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.146 x 10-3 | 38 | 0 | 100.00% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.33718 x 10-1 | 8 | 3 | 2 | 8 | 72.73% | 80.00% | 11 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.547153' Avg. expression score for this sample: '1344.24' Avg. expression score in LCM sample: '341.491' Tissue used: 'full endosperm' |
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| AT2G19780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.62504' Avg. expression score in LCM sample: '27.2499' Tissue used: 'full endosperm' |
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| AT2G19780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.25 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.99268' Avg. expression score in LCM sample: '27.2499' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '17.7673' Avg. embryo expression (LCM): '25.8707' |
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| AT2G19770 | PRF5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.402107' Avg. embryo expression (LCM): '0' |
||||
| AT2G19770 | PRF5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.80405' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G19770 | PRF5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19770 | PRF5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19770 | PRF5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.75415' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G19770 | PRF5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19760 | PRF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.3539 x 10-2 | 729 | 292 | 71.40% | 1021 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19760 | PRF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.09 x 10-4 | 168 | 44 | 79.25% | 212 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19760 | PRF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.27411 x 10-1 | 95 | 47 | 45 | 82 | 66.90% | 64.57% | 142 | 127 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.835751' Avg. expression score for this sample: '84.4272' Avg. expression score in LCM sample: '88.5696' Tissue used: 'full endosperm' |
||||
| AT2G19760 | PRF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.679 x 10-3 | 53 | 10 | 84.13% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19760 | PRF1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.29763 x 10-1 | 72 | 78 | 11 | 12 | 48.00% | 52.17% | 150 | 23 | TAIR8 |
Avg. embryo expression (dissected): '103.284' Avg. embryo expression (LCM): '120.751' |
|||
| AT2G19760 | PRF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.15554 x 10-1 | 63 | 33 | 35 | 68 | 65.62% | 66.02% | 96 | 103 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.835751' Avg. expression score for this sample: '79.4998' Avg. expression score in LCM sample: '88.5696' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G19750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.905 | 294 | 72 | 141 | 122 | 80.33% | 46.39% | 366 | 263 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.667309' Avg. expression score for this sample: '349.123' Avg. expression score in LCM sample: '149.184' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.03403 x 10-1 | 81 | 53 | 60.45% | 134 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.7 x 10-17 | 631 | 166 | 143 | 48 | 79.17% | 25.13% | 797 | 191 | TAIR8 |
Avg. embryo expression (dissected): '804.83' Avg. embryo expression (LCM): '1061.53' |
||||
| AT2G19750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 788 | 32 | 96.10% | 820 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.38168 x 10-1 | 378 | 95 | 174 | 207 | 79.92% | 54.33% | 473 | 381 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.667309' Avg. expression score for this sample: '347.054' Avg. expression score in LCM sample: '149.184' Tissue used: 'full endosperm' |
|||||
| AT2G19750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-6 | 198 | 170 | 53.80% | 368 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.77408 x 10-1 | 408 | 160 | 71.83% | 568 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.2676 x 10-2 | 457 | 156 | 181 | 350 | 74.55% | 65.91% | 613 | 531 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.036406' Avg. expression score for this sample: '423.649' Avg. expression score in LCM sample: '96.3448' Tissue used: 'full endosperm' |
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| AT2G19740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.9 x 10-6 | 591 | 408 | 70 | 101 | 59.16% | 59.06% | 999 | 171 | TAIR8 |
Avg. embryo expression (dissected): '772.971' Avg. embryo expression (LCM): '951.915' |
||||
| AT2G19740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.59245 x 10-1 | 355 | 147 | 128 | 252 | 70.72% | 66.32% | 502 | 380 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.036406' Avg. expression score for this sample: '427.365' Avg. expression score in LCM sample: '96.3448' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.18165 x 10-1 | 108 | 61 | 63.91% | 169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.5 x 10-21 | 715 | 115 | 86.14% | 830 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.5 x 10-7 | 175 | 27 | 86.63% | 202 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.53417 x 10-1 | 169 | 28 | 90 | 81 | 85.79% | 47.37% | 197 | 171 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.339125' Avg. expression score for this sample: '421.112' Avg. expression score in LCM sample: '323.442' Tissue used: 'full endosperm' |
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| AT2G19730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.58988 x 10-1 | 84 | 28 | 75.00% | 112 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.796 x 10-3 | 33 | 31 | 51.56% | 64 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0069 x 10-2 | 179 | 99 | 25 | 10 | 64.39% | 28.57% | 278 | 35 | TAIR8 |
Avg. embryo expression (dissected): '1266.57' Avg. embryo expression (LCM): '2175.89' |
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| AT2G19730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.75283 x 10-1 | 105 | 24 | 31 | 38 | 81.40% | 55.07% | 129 | 69 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.339125' Avg. expression score for this sample: '534.154' Avg. expression score in LCM sample: '323.442' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19720 | rps15ab | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 2 | 2 | 1 | 60.00% | 33.33% | 5 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.560744' Avg. expression score for this sample: '40.0288' Avg. expression score in LCM sample: '24.0899' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19720 | rps15ab | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19720 | rps15ab | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.285 x 10-2 | 12 | 0 | 1 | 1 | 100.00% | 50.00% | 12 | 2 | TAIR8 |
Avg. embryo expression (dissected): '72.9998' Avg. embryo expression (LCM): '84.2178' |
|||
| AT2G19720 | rps15ab | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.67778 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19720 | rps15ab | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.85824 x 10-1 | 1 | 4 | 20.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19720 | rps15ab | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 10 | 3 | 4 | 0 | 76.92% | 0.00% | 13 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.560744' Avg. expression score for this sample: '51.9581' Avg. expression score in LCM sample: '24.0899' Tissue used: 'full endosperm' |
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| AT2G19710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.3 x 10-5 | 68 | 4 | 21 | 91 | 94.44% | 81.25% | 72 | 112 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000805' Avg. expression score for this sample: '146.874' Avg. expression score in LCM sample: '25.9859' Tissue used: 'full endosperm' |
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| AT2G19710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.75 x 10-4 | 89 | 4 | 95.70% | 93 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.81251 x 10-1 | 13 | 10 | 1 | 2 | 56.52% | 66.67% | 23 | 3 | TAIR8 |
Avg. embryo expression (dissected): '44.7948' Avg. embryo expression (LCM): '38.2911' |
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| AT2G19710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.4156 x 10-1 | 12 | 10 | 11 | 19 | 54.55% | 63.33% | 22 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000805' Avg. expression score for this sample: '61.895' Avg. expression score in LCM sample: '25.9859' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.1376 | 19 | 1 | 95.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.9 x 10-8 | 175 | 5 | 97.22% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.269239' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G19700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G19700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19690 | PLA2-BETA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '16.4295' Avg. expression score in LCM sample: '1.98422' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19690 | PLA2-BETA | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19690 | PLA2-BETA | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '21.8297' Avg. embryo expression (LCM): '11.8804' |
|||||
| AT2G19690 | PLA2-BETA | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19690 | PLA2-BETA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.1591' Avg. expression score in LCM sample: '1.98422' Tissue used: 'full endosperm' |
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| AT2G19690 | PLA2-BETA | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.9 x 10-15 | 621 | 97 | 86.49% | 718 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.08 x 10-3 | 423 | 58 | 201 | 283 | 87.94% | 58.47% | 481 | 484 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.007069' Avg. expression score for this sample: '335.107' Avg. expression score in LCM sample: '183.151' Tissue used: 'full endosperm' |
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| AT2G19680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.362 x 10-3 | 208 | 102 | 46 | 21 | 67.10% | 31.34% | 310 | 67 | TAIR8 |
Avg. embryo expression (dissected): '278.231' Avg. embryo expression (LCM): '420.574' |
||||
| AT2G19680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.73907 x 10-1 | 169 | 43 | 74 | 73 | 79.72% | 49.66% | 212 | 147 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.007069' Avg. expression score for this sample: '189.733' Avg. expression score in LCM sample: '183.151' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.9191 x 10-2 | 68 | 43 | 61.26% | 111 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1578 | 130 | 92.39% | 1708 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19670 | PRMT1A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.6114 x 10-2 | 163 | 82 | 66.53% | 245 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19670 | PRMT1A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.21181 x 10-1 | 18 | 27 | 29 | 82 | 40.00% | 73.87% | 45 | 111 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.016995' Avg. expression score for this sample: '31.004' Avg. expression score in LCM sample: '3.26294' Tissue used: 'full endosperm' |
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| AT2G19670 | PRMT1A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.8 x 10-13 | 229 | 42 | 84.50% | 271 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19670 | PRMT1A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.1791 x 10-2 | 25 | 6 | 80.65% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19670 | PRMT1A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.196 x 10-3 | 126 | 245 | 26 | 58 | 33.96% | 69.05% | 371 | 84 | TAIR8 |
Avg. embryo expression (dissected): '181.488' Avg. embryo expression (LCM): '241.69' |
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| AT2G19670 | PRMT1A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.255 x 10-3 | 28 | 60 | 10 | 38 | 31.82% | 79.17% | 88 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.016995' Avg. expression score for this sample: '37.0233' Avg. expression score in LCM sample: '3.26294' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 3 | 0 | 5 | 0.00% | 100.00% | 3 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.044567' Avg. expression score for this sample: '6.1012' Avg. expression score in LCM sample: '2.21939' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.90856 x 10-1 | 6 | 21 | 6 | 11 | 22.22% | 64.71% | 27 | 17 | TAIR8 |
Avg. embryo expression (dissected): '78.7902' Avg. embryo expression (LCM): '34.1091' |
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| AT2G19660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.9855 x 10-2 | 2 | 17 | 0 | 5 | 10.53% | 100.00% | 19 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.044567' Avg. expression score for this sample: '12.5417' Avg. expression score in LCM sample: '2.21939' Tissue used: 'full endosperm' |
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| AT2G19650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.5927 x 10-2 | 6 | 1 | 3 | 27 | 85.71% | 90.00% | 7 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.098952' Avg. expression score for this sample: '8.23131' Avg. expression score in LCM sample: '11.2733' Tissue used: 'full endosperm' |
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| AT2G19650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 4 | 0 | 2 | 60.00% | 100.00% | 10 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.098952' Avg. expression score for this sample: '3.94708' Avg. expression score in LCM sample: '11.2733' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.62554 x 10-1 | 10 | 5 | 4 | 3 | 66.67% | 42.86% | 15 | 7 | TAIR8 |
Avg. embryo expression (dissected): '18.7629' Avg. embryo expression (LCM): '5.87741' |
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| AT2G19650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.81133 x 10-1 | 15 | 0 | 100.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19640 | ASHR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.634 x 10-3 | 51 | 7 | 87.93% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19640 | ASHR2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.59645 x 10-1 | 15 | 22 | 8 | 8 | 40.54% | 50.00% | 37 | 16 | TAIR8 |
Avg. embryo expression (dissected): '152.871' Avg. embryo expression (LCM): '369.423' |
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| AT2G19640 | ASHR2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.00194 x 10-1 | 43 | 16 | 72.88% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19640 | ASHR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.50818 x 10-1 | 23 | 15 | 17 | 32 | 60.53% | 65.31% | 38 | 49 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '109.89' Avg. expression score in LCM sample: '26.2652' Tissue used: 'full endosperm' |
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| AT2G19640 | ASHR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.5306 x 10-1 | 17 | 2 | 7 | 14 | 89.47% | 66.67% | 19 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '68.2879' Avg. expression score in LCM sample: '26.2652' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19640 | ASHR2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.46875 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G19630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G19630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19620 | NDL3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19620 | NDL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '65.6687' Avg. expression score in LCM sample: '23.6489' Tissue used: 'full endosperm' |