| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G20120 | COV1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20120 | COV1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '345.26' Avg. expression score in LCM sample: '255.229' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G20120 | COV1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '383.322' Avg. expression score in LCM sample: '255.229' Tissue used: 'full endosperm' |
||||||
| AT2G20120 | COV1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.787 x 10-2 | 104 | 12 | 89.66% | 116 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0896 x 10-2 | 14 | 1 | 1 | 16 | 93.33% | 94.12% | 15 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.123273' Avg. expression score for this sample: '29.5134' Avg. expression score in LCM sample: '16.4323' Tissue used: 'full endosperm' |
|||||
| AT2G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.30145 x 10-1 | 45 | 5 | 90.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 8 | 4 | 15 | 42.86% | 78.95% | 14 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.123273' Avg. expression score for this sample: '27.0274' Avg. expression score in LCM sample: '16.4323' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.65794 x 10-1 | 15 | 10 | 5 | 11 | 60.00% | 68.75% | 25 | 16 | TAIR8 |
Avg. embryo expression (dissected): '54.8784' Avg. embryo expression (LCM): '50.0585' |
||||
| AT2G20100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.51186 x 10-1 | 4 | 10 | 2 | 4 | 28.57% | 66.67% | 14 | 6 | TAIR8 |
Avg. embryo expression (dissected): '22.2668' Avg. embryo expression (LCM): '17.9964' |
||||
| AT2G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000063' Avg. expression score for this sample: '.705692' Avg. expression score in LCM sample: '.999458' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.23 x 10-4 | 28 | 3 | 2 | 40 | 90.32% | 95.24% | 31 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000063' Avg. expression score for this sample: '25.9633' Avg. expression score in LCM sample: '.999458' Tissue used: 'full endosperm' |
|||||
| AT2G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.29909 x 10-1 | 24 | 0 | 100.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.07593 x 10-1 | 78 | 1 | 98.73% | 79 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.5556 x 10-2 | 1 | 34 | 2.86% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 31 | 24 | 56.36% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.181473' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G20070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 4 | 0 | 5 | 0.00% | 100.00% | 4 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.409859' Avg. expression score for this sample: '7.75013' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G20070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G20070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.409859' Avg. expression score for this sample: '.568788' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 62 | 30 | 34 | 66 | 67.39% | 66.00% | 92 | 100 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '88.5508' Avg. expression score in LCM sample: '24.2516' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.74771 x 10-1 | 29 | 10 | 74.36% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.7256 x 10-1 | 105 | 88 | 27 | 32 | 54.40% | 54.24% | 193 | 59 | TAIR8 |
Avg. embryo expression (dissected): '197.064' Avg. embryo expression (LCM): '218.029' |
||||
| AT2G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.38002 x 10-1 | 138 | 56 | 71.13% | 194 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 61 | 22 | 32 | 50 | 73.49% | 60.98% | 83 | 82 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '82.2327' Avg. expression score in LCM sample: '24.2516' Tissue used: 'full endosperm' |
|||||
| AT2G20060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.13 x 10-4 | 166 | 36 | 82.18% | 202 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 571 | 22 | 96.29% | 593 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.02718 x 10-1 | 397 | 200 | 222 | 525 | 66.50% | 70.28% | 597 | 747 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.064383' Avg. expression score for this sample: '305.784' Avg. expression score in LCM sample: '220.63' Tissue used: 'full endosperm' |
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| AT2G20050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.66548 x 10-1 | 186 | 138 | 71 | 67 | 57.41% | 48.55% | 324 | 138 | TAIR8 |
Avg. embryo expression (dissected): '235.425' Avg. embryo expression (LCM): '170.746' |
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| AT2G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-7 | 95 | 9 | 91.35% | 104 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.07368 x 10-1 | 263 | 154 | 118 | 380 | 63.07% | 76.31% | 417 | 498 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.064383' Avg. expression score for this sample: '274.237' Avg. expression score in LCM sample: '220.63' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-5 | 324 | 83 | 79.61% | 407 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.7619 x 10-1 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 2 | 0 | 2 | 75.00% | 100.00% | 8 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '6.27183' Avg. expression score in LCM sample: '1.24932' Tissue used: 'full endosperm' |
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| AT2G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '.441057' Avg. expression score in LCM sample: '1.24932' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 2 | 0 | 0 | 50.00% | 4 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.48629' Avg. embryo expression (LCM): '0' |
|||||
| AT2G20020 | CAF1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.2813 x 10-2 | 62 | 29 | 5 | 6 | 68.13% | 54.55% | 91 | 11 | TAIR8 |
Avg. embryo expression (dissected): '231.841' Avg. embryo expression (LCM): '290.279' |
|||
| AT2G20020 | CAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20020 | CAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.30485 x 10-1 | 24 | 4 | 11 | 11 | 85.71% | 50.00% | 28 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.646481' Avg. expression score for this sample: '89.548' Avg. expression score in LCM sample: '27.0736' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G20020 | CAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.4288 x 10-2 | 37 | 37 | 50.00% | 74 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20020 | CAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-6 | 69 | 6 | 92.00% | 75 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20020 | CAF1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.14832 x 10-1 | 40 | 7 | 39 | 31 | 85.11% | 44.29% | 47 | 70 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.646481' Avg. expression score for this sample: '73.0673' Avg. expression score in LCM sample: '27.0736' Tissue used: 'full endosperm' |
||||
| AT2G20010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.70213 x 10-1 | 113 | 23 | 71 | 117 | 83.09% | 62.23% | 136 | 188 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.596311' Avg. expression score for this sample: '53.0452' Avg. expression score in LCM sample: '26.5003' Tissue used: 'full endosperm' |
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| AT2G20010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-19 | 207 | 7 | 96.73% | 214 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.98766 x 10-1 | 23 | 14 | 17 | 21 | 62.16% | 55.26% | 37 | 38 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.596311' Avg. expression score for this sample: '26.2872' Avg. expression score in LCM sample: '26.5003' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.8155 x 10-2 | 29 | 4 | 87.88% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.34827 x 10-1 | 20 | 18 | 3 | 5 | 52.63% | 62.50% | 38 | 8 | TAIR8 |
Avg. embryo expression (dissected): '21.4772' Avg. embryo expression (LCM): '18.4234' |
||||
| AT2G20010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.19 x 10-4 | 179 | 42 | 81.00% | 221 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20000 | HBT | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.73 x 10-4 | 37 | 1 | 97.37% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20000 | HBT | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3225 x 10-2 | 43 | 5 | 89.58% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20000 | HBT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.96711 x 10-1 | 50 | 20 | 19 | 44 | 71.43% | 69.84% | 70 | 63 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.307906' Avg. expression score for this sample: '50.9523' Avg. expression score in LCM sample: '17.9609' Tissue used: 'full endosperm' |
||||
| AT2G20000 | HBT | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.41314 x 10-1 | 26 | 37 | 11 | 12 | 41.27% | 52.17% | 63 | 23 | TAIR8 |
Avg. embryo expression (dissected): '88.7385' Avg. embryo expression (LCM): '55.2326' |
|||
| AT2G20000 | HBT | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.64858 x 10-1 | 16 | 2 | 88.89% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20000 | HBT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.80168 x 10-1 | 13 | 5 | 7 | 26 | 72.22% | 78.79% | 18 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.307906' Avg. expression score for this sample: '45.2216' Avg. expression score in LCM sample: '17.9609' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G19990 | PR-1-LIKE | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.82112' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G19990 | PR-1-LIKE | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19990 | PR-1-LIKE | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.824777' Avg. embryo expression (LCM): '0' |
||||
| AT2G19990 | PR-1-LIKE | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19990 | PR-1-LIKE | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.0084' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G19990 | PR-1-LIKE | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19980 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.336953' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G19980 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G19980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G19980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.03672 x 10-1 | 1093 | 729 | 59.99% | 1822 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 0 | 6 | 5 | 100.00% | 45.45% | 5 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.261741' Avg. expression score for this sample: '9.74441' Avg. expression score in LCM sample: '106.398' Tissue used: 'full endosperm' |
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| AT2G19970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.5382 x 10-1 | 118 | 76 | 60.82% | 194 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.78285 x 10-1 | 20 | 11 | 10 | 3 | 64.52% | 23.08% | 31 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.261741' Avg. expression score for this sample: '35.9223' Avg. expression score in LCM sample: '106.398' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.38917' Avg. embryo expression (LCM): '0' |
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| AT2G19960 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.9861' Avg. embryo expression (LCM): '0' |
|||||
| AT2G19960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G19960 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19960 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19960 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G19950 | GC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.64734 x 10-1 | 6 | 1 | 0 | 7 | 85.71% | 100.00% | 7 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487607' Avg. expression score for this sample: '73.7411' Avg. expression score in LCM sample: '18.5341' Tissue used: 'full endosperm' |
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| AT2G19950 | GC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.95217 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19950 | GC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 3 | 3 | 100.00% | 50.00% | 2 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487607' Avg. expression score for this sample: '48.9263' Avg. expression score in LCM sample: '18.5341' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G19950 | GC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G19950 | GC1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '38.4037' Avg. embryo expression (LCM): '32.6774' |
|||
| AT2G19950 | GC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G19940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19940 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '55.8259' Avg. expression score in LCM sample: '23.2374' Tissue used: 'full endosperm' |
||||||
| AT2G19940 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '74.3291' Avg. embryo expression (LCM): '95.3196' |
||||||
| AT2G19940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G19940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '34.8326' Avg. expression score in LCM sample: '23.2374' Tissue used: 'pure endosperm, no chalazal' |