| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G20440 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.14706 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.14706 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 3 | 2 | 1 | 62.50% | 33.33% | 8 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '57.2885' Avg. expression score in LCM sample: '15.5651' Tissue used: 'full endosperm' |
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| AT2G20440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '46.0997' Avg. expression score in LCM sample: '15.5651' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20440 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '24.6681' Avg. embryo expression (LCM): '15.5224' |
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| AT2G20430 | RIC6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT2G20430 | RIC6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G20430 | RIC6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20430 | RIC6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.493847' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20430 | RIC6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20430 | RIC6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20420 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.33909 x 10-1 | 175 | 44 | 79.91% | 219 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20420 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.82921 x 10-1 | 29 | 17 | 10 | 56 | 63.04% | 84.85% | 46 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.024801' Avg. expression score for this sample: '313.893' Avg. expression score in LCM sample: '371.49' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20420 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.55424 x 10-1 | 57 | 55 | 11 | 20 | 50.89% | 64.52% | 112 | 31 | TAIR8 |
Avg. embryo expression (dissected): '433.392' Avg. embryo expression (LCM): '640.199' |
||||
| AT2G20420 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.22726 x 10-1 | 57 | 11 | 83.82% | 68 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20420 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.6146 x 10-2 | 72 | 27 | 42 | 122 | 72.73% | 74.39% | 99 | 164 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.024801' Avg. expression score for this sample: '572.933' Avg. expression score in LCM sample: '371.49' Tissue used: 'full endosperm' |
|||||
| AT2G20420 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.54 x 10-4 | 195 | 32 | 85.90% | 227 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20410 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.72 x 10-4 | 91 | 9 | 91.00% | 100 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 43 | 15 | 74.14% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.956 x 10-3 | 60 | 10 | 10 | 45 | 85.71% | 81.82% | 70 | 55 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.119598' Avg. expression score for this sample: '121.709' Avg. expression score in LCM sample: '42.4476' Tissue used: 'full endosperm' |
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| AT2G20410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.98969 x 10-1 | 38 | 20 | 27 | 42 | 65.52% | 60.87% | 58 | 69 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.119598' Avg. expression score for this sample: '71.9158' Avg. expression score in LCM sample: '42.4476' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.19978 x 10-1 | 15 | 3 | 83.33% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20410 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.74395 x 10-1 | 31 | 32 | 9 | 7 | 49.21% | 43.75% | 63 | 16 | TAIR8 |
Avg. embryo expression (dissected): '74.799' Avg. embryo expression (LCM): '43.8922' |
||||
| AT2G20400 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.37837 x 10-1 | 9 | 24 | 7 | 6 | 27.27% | 46.15% | 33 | 13 | TAIR8 |
Avg. embryo expression (dissected): '62.5895' Avg. embryo expression (LCM): '48.6645' |
||||
| AT2G20400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.39752 x 10-1 | 9 | 15 | 9 | 24 | 37.50% | 72.73% | 24 | 33 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.478887' Avg. expression score for this sample: '53.7928' Avg. expression score in LCM sample: '18.6957' Tissue used: 'full endosperm' |
|||||
| AT2G20400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.12805 x 10-1 | 4 | 6 | 40.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 11 | 7 | 25 | 42.11% | 78.12% | 19 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.478887' Avg. expression score for this sample: '42.3812' Avg. expression score in LCM sample: '18.6957' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20400 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8597 x 10-2 | 49 | 14 | 77.78% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.1921 x 10-2 | 29 | 7 | 80.56% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.4746 x 10-2 | 43 | 26 | 62.32% | 69 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.51642 x 10-1 | 13 | 1 | 5 | 5 | 92.86% | 50.00% | 14 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.143931' Avg. expression score for this sample: '50.9525' Avg. expression score in LCM sample: '30.6158' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20390 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.21257 x 10-1 | 16 | 7 | 5 | 5 | 69.57% | 50.00% | 23 | 10 | TAIR8 |
Avg. embryo expression (dissected): '79.3137' Avg. embryo expression (LCM): '70.7927' |
||||
| AT2G20390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.6236 x 10-2 | 7 | 6 | 53.85% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.80344 x 10-1 | 26 | 7 | 3 | 13 | 78.79% | 81.25% | 33 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.143931' Avg. expression score for this sample: '55.5686' Avg. expression score in LCM sample: '30.6158' Tissue used: 'full endosperm' |
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| AT2G20390 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.423 x 10-3 | 108 | 8 | 93.10% | 116 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20380 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.7414' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G20380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.23078' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20380 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28571 x 10-1 | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.65712' Avg. embryo expression (LCM): '0' |
||||
| AT2G20370 | MUR3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.70363 x 10-1 | 46 | 73 | 16 | 25 | 38.66% | 60.98% | 119 | 41 | TAIR8 |
Avg. embryo expression (dissected): '183.847' Avg. embryo expression (LCM): '97.7685' |
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| AT2G20370 | MUR3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.72289 x 10-1 | 685 | 391 | 426 | 1090 | 63.66% | 71.90% | 1076 | 1516 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.062933' Avg. expression score for this sample: '919.314' Avg. expression score in LCM sample: '317.695' Tissue used: 'full endosperm' |
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| AT2G20370 | MUR3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.60504 x 10-1 | 133 | 47 | 73.89% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20370 | MUR3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.01876 x 10-1 | 304 | 203 | 112 | 410 | 59.96% | 78.54% | 507 | 522 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.062933' Avg. expression score for this sample: '794.806' Avg. expression score in LCM sample: '317.695' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20370 | MUR3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 589 | 66 | 89.92% | 655 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20370 | MUR3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 493 | 46 | 91.47% | 539 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20362 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.85 x 10-4 | 62 | 14 | 81.58% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20362 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.8081 x 10-2 | 12 | 16 | 9 | 5 | 42.86% | 35.71% | 28 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.175183' Avg. expression score for this sample: '16.6758' Avg. expression score in LCM sample: '7.12849' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20362 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.25177 x 10-1 | 15 | 36 | 0 | 4 | 29.41% | 100.00% | 51 | 4 | TAIR8 |
Avg. embryo expression (dissected): '23.6094' Avg. embryo expression (LCM): '8.1254' |
||||
| AT2G20362 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.67803 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20362 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 26 | 31 | 3 | 38 | 45.61% | 92.68% | 57 | 41 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.175183' Avg. expression score for this sample: '17.8859' Avg. expression score in LCM sample: '7.12849' Tissue used: 'full endosperm' |
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| AT2G20362 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.9 x 10-5 | 66 | 13 | 83.54% | 79 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20360 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-10 | 927 | 245 | 79.10% | 1172 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-10 | 1336 | 379 | 77.90% | 1715 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.684 x 10-3 | 406 | 194 | 226 | 657 | 67.67% | 74.41% | 600 | 883 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.051003' Avg. expression score for this sample: '247.763' Avg. expression score in LCM sample: '217.72' Tissue used: 'full endosperm' |
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| AT2G20360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.97217 x 10-1 | 334 | 261 | 153 | 474 | 56.13% | 75.60% | 595 | 627 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.051003' Avg. expression score for this sample: '273.417' Avg. expression score in LCM sample: '217.72' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.51594 x 10-1 | 137 | 50 | 73.26% | 187 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20360 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.01575 x 10-1 | 522 | 651 | 83 | 125 | 44.50% | 60.10% | 1173 | 208 | TAIR8 |
Avg. embryo expression (dissected): '473.045' Avg. embryo expression (LCM): '508.723' |
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| AT2G20350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G20350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.4074' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G20350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G20350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20340 | AAS | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.362 x 10-3 | 27 | 0 | 100.00% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20340 | AAS | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 5 | 2 | 1 | 2 | 71.43% | 66.67% | 7 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.471261' Avg. expression score for this sample: '5.1265' Avg. expression score in LCM sample: '4.86501' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20340 | AAS | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37186 x 10-1 | 6 | 1 | 2 | 0 | 85.71% | 0.00% | 7 | 2 | TAIR8 |
Avg. embryo expression (dissected): '7.20581' Avg. embryo expression (LCM): '11.0892' |
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| AT2G20340 | AAS | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.68914 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20340 | AAS | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.07547 x 10-1 | 13 | 5 | 2 | 13 | 72.22% | 86.67% | 18 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.471261' Avg. expression score for this sample: '8.25656' Avg. expression score in LCM sample: '4.86501' Tissue used: 'full endosperm' |
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| AT2G20340 | AAS | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.48616 x 10-1 | 18 | 1 | 94.74% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20330 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.9042 x 10-2 | 132 | 33 | 80.00% | 165 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.63063 x 10-1 | 90 | 29 | 75.63% | 119 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.59097 x 10-1 | 30 | 8 | 15 | 41 | 78.95% | 73.21% | 38 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.484969' Avg. expression score for this sample: '117.897' Avg. expression score in LCM sample: '69.6828' Tissue used: 'full endosperm' |
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| AT2G20330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.49897 x 10-1 | 3 | 7 | 4 | 9 | 30.00% | 69.23% | 10 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.484969' Avg. expression score for this sample: '100.926' Avg. expression score in LCM sample: '69.6828' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.85632 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20330 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.81866 x 10-1 | 22 | 14 | 2 | 6 | 61.11% | 75.00% | 36 | 8 | TAIR8 |
Avg. embryo expression (dissected): '159.422' Avg. embryo expression (LCM): '122.999' |
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| AT2G20320 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 277 | 314 | 109 | 147 | 46.87% | 57.42% | 591 | 256 | TAIR8 |
Avg. embryo expression (dissected): '346.533' Avg. embryo expression (LCM): '124.041' |
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| AT2G20320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1 x 10-7 | 1131 | 690 | 815 | 2638 | 62.11% | 76.40% | 1821 | 3453 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000043' Avg. expression score for this sample: '984.036' Avg. expression score in LCM sample: '481.357' Tissue used: 'full endosperm' |
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| AT2G20320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.67051 x 10-1 | 242 | 103 | 70.14% | 345 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.61354 x 10-1 | 1509 | 925 | 922 | 2276 | 62.00% | 71.17% | 2434 | 3198 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000043' Avg. expression score for this sample: '1416.93' Avg. expression score in LCM sample: '481.357' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20320 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-18 | 1059 | 256 | 80.53% | 1315 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.86 x 10-4 | 452 | 141 | 76.22% | 593 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20310 | RIN13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.9 x 10-10 | 563 | 125 | 81.83% | 688 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20310 | RIN13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.7804 x 10-2 | 187 | 164 | 89 | 230 | 53.28% | 72.10% | 351 | 319 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.126046' Avg. expression score for this sample: '436.429' Avg. expression score in LCM sample: '170.878' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20310 | RIN13 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.1155 x 10-1 | 192 | 250 | 55 | 69 | 43.44% | 55.65% | 442 | 124 | TAIR8 |
Avg. embryo expression (dissected): '579.413' Avg. embryo expression (LCM): '266.141' |
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| AT2G20310 | RIN13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0198 | 76 | 18 | 80.85% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20310 | RIN13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.2 x 10-4 | 244 | 97 | 108 | 374 | 71.55% | 77.59% | 341 | 482 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.126046' Avg. expression score for this sample: '334.467' Avg. expression score in LCM sample: '170.878' Tissue used: 'full endosperm' |
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| AT2G20310 | RIN13 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7 x 10-5 | 531 | 151 | 77.86% | 682 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20300 | ALE2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.5512 x 10-2 | 41 | 8 | 83.67% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20300 | ALE2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.35 x 10-4 | 33 | 1 | 97.06% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20300 | ALE2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.18821 x 10-1 | 33 | 13 | 18 | 51 | 71.74% | 73.91% | 46 | 69 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.836127' Avg. expression score for this sample: '242.996' Avg. expression score in LCM sample: '154.71' Tissue used: 'full endosperm' |
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| AT2G20300 | ALE2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.4873 x 10-1 | 25 | 23 | 14 | 35 | 52.08% | 71.43% | 48 | 49 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.836127' Avg. expression score for this sample: '257.736' Avg. expression score in LCM sample: '154.71' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20300 | ALE2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.22629 x 10-1 | 7 | 2 | 77.78% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20300 | ALE2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.6382 x 10-1 | 20 | 32 | 3 | 5 | 38.46% | 62.50% | 52 | 8 | TAIR8 |
Avg. embryo expression (dissected): '235.773' Avg. embryo expression (LCM): '187.537' |
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| AT2G20290 | XIG | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 4 | 1 | 0 | 55.56% | 0.00% | 9 | 1 | TAIR8 |
Avg. embryo expression (dissected): '36.3299' Avg. embryo expression (LCM): '36.1813' |
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| AT2G20290 | XIG | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.60002 x 10-1 | 13 | 2 | 4 | 14 | 86.67% | 77.78% | 15 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.471261' Avg. expression score for this sample: '75.9939' Avg. expression score in LCM sample: '165.072' Tissue used: 'full endosperm' |
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| AT2G20290 | XIG | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20290 | XIG | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 3 | 1 | 4 | 40.00% | 80.00% | 5 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.471261' Avg. expression score for this sample: '70.5684' Avg. expression score in LCM sample: '165.072' Tissue used: 'pure endosperm, no chalazal' |