| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G167085 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.30091 x 10-2 | 699 | 572 | 651 | 580 | 55.00% | 47.12% | 1271 | 1231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003676' χ2 p-value for Mo17 x B73: '.0430091' Biased in favor of strain: 'B73' |
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| GRMZM2G167085 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.82 x 10-5 | 408 | 135 | 186 | 204 | 75.14% | 52.31% | 543 | 390 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000282' χ2 p-value for Mo17 x B73: '1.79e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G167019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 1 | 10 | 100.00% | 90.91% | 5 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0880815' Biased in favor of strain: '' |
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| GRMZM2G167019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 1 | 75.00% | 50.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G167018 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.66 x 10-9 | 59 | 10 | 63 | 6 | 85.51% | 8.70% | 69 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.66e-09' χ2 p-value for Mo17 x B73: '6.79e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G167018 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.772972 x 10-1 | 51 | 12 | 9 | 16 | 80.95% | 64.00% | 63 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0161582' χ2 p-value for Mo17 x B73: '.7772972' Biased in favor of strain: '' |
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| GRMZM2G167008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.1743 x 10-1 | 65 | 27 | 61 | 43 | 70.65% | 41.35% | 92 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.41743' χ2 p-value for Mo17 x B73: '4.31e-08' Biased in favor of strain: '' |
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| GRMZM2G167008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.14567 x 10-2 | 97 | 52 | 94 | 65 | 65.10% | 40.88% | 149 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002273' χ2 p-value for Mo17 x B73: '.0214567' Biased in favor of strain: 'B73' |
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| GRMZM2G166994 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.743671 x 10-1 | 97 | 75 | 81 | 79 | 56.40% | 49.38% | 172 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0934478' χ2 p-value for Mo17 x B73: '.8743671' Biased in favor of strain: '' |
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| GRMZM2G166994 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.625411 x 10-1 | 151 | 75 | 103 | 146 | 66.81% | 58.63% | 226 | 249 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9625411' χ2 p-value for Mo17 x B73: '.0071738' Biased in favor of strain: '' |
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| GRMZM2G166987 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 7 | 2 | 100.00% | 22.22% | 6 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G166987 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.1935 x 10-3 | 36 | 6 | 27 | 10 | 85.71% | 27.03% | 42 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.67e-06' χ2 p-value for Mo17 x B73: '.0051935' Biased in favor of strain: 'B73' |
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| GRMZM2G166985 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.44 x 10-12 | 393 | 163 | 259 | 123 | 70.68% | 32.20% | 556 | 382 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.77e-22' χ2 p-value for Mo17 x B73: '3.44e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G166985 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.69981 x 10-2 | 103 | 35 | 71 | 70 | 74.64% | 49.65% | 138 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0469981' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: '' |
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| GRMZM2G166976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.90015 x 10-2 | 20 | 3 | 17 | 15 | 86.96% | 46.88% | 23 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0390015' χ2 p-value for Mo17 x B73: '.0175489' Biased in favor of strain: '' |
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| GRMZM2G166976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.331057 x 10-1 | 105 | 110 | 285 | 169 | 48.84% | 37.22% | 215 | 454 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7331057' χ2 p-value for Mo17 x B73: '5.21e-08' Biased in favor of strain: '' |
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| GRMZM2G166971 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.35 x 10-12 | 142 | 36 | 162 | 58 | 79.78% | 26.36% | 178 | 220 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.94e-15' χ2 p-value for Mo17 x B73: '2.35e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G166971 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.9799 x 10-2 | 145 | 56 | 65 | 85 | 72.14% | 56.67% | 201 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.099799' χ2 p-value for Mo17 x B73: '.0093747' Biased in favor of strain: '' |
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| GRMZM2G166931 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.268494 x 10-1 | 22 | 5 | 15 | 47 | 81.48% | 75.81% | 27 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024745' χ2 p-value for Mo17 x B73: '.1268494' Biased in favor of strain: '' |
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| GRMZM2G166931 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.139858 x 10-1 | 35 | 32 | 16 | 37 | 52.24% | 69.81% | 67 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7139858' χ2 p-value for Mo17 x B73: '.0039195' Biased in favor of strain: '' |
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| GRMZM2G166903 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.164123 x 10-1 | 177 | 165 | 141 | 158 | 51.75% | 52.84% | 342 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5164123' χ2 p-value for Mo17 x B73: '.3255408' Biased in favor of strain: '' |
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| GRMZM2G166903 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.106527 x 10-1 | 167 | 102 | 133 | 206 | 62.08% | 60.77% | 269 | 339 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1106527' χ2 p-value for Mo17 x B73: '.0212065' Biased in favor of strain: '' |
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| GRMZM2G166897 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.38 x 10-6 | 281 | 76 | 205 | 132 | 78.71% | 39.17% | 357 | 337 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.38e-06' χ2 p-value for Mo17 x B73: '9.32e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G166897 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.51 x 10-8 | 453 | 306 | 455 | 287 | 59.68% | 38.68% | 759 | 742 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.51e-08' χ2 p-value for Mo17 x B73: '6.94e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G166877 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.389825 x 10-1 | 27 | 10 | 14 | 23 | 72.97% | 62.16% | 37 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0051935' χ2 p-value for Mo17 x B73: '.1389825' Biased in favor of strain: '' |
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| GRMZM2G166877 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574628 x 10-1 | 62 | 18 | 20 | 42 | 77.50% | 67.74% | 80 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.039836' χ2 p-value for Mo17 x B73: '.8574628' Biased in favor of strain: '' |
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| GRMZM2G166875 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.638318 x 10-1 | 67 | 69 | 50 | 65 | 49.26% | 56.52% | 136 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8638318' χ2 p-value for Mo17 x B73: '.1618858' Biased in favor of strain: '' |
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| GRMZM2G166875 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.361255 x 10-1 | 45 | 19 | 17 | 41 | 70.31% | 70.69% | 64 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5361255' χ2 p-value for Mo17 x B73: '.5157353' Biased in favor of strain: '' |
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| GRMZM2G166873 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327674 x 10-1 | 23 | 32 | 20 | 32 | 41.82% | 61.54% | 55 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000926' χ2 p-value for Mo17 x B73: '.4327674' Biased in favor of strain: '' |
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| GRMZM2G166873 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.924401 x 10-1 | 89 | 82 | 83 | 72 | 52.05% | 46.45% | 171 | 155 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5924401' χ2 p-value for Mo17 x B73: '.3769439' Biased in favor of strain: '' |
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| GRMZM2G166857 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 4 | 1 | 66.67% | 20.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM2G166857 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G166855 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.157466 x 10-1 | 215 | 118 | 150 | 336 | 64.56% | 69.14% | 333 | 486 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4157466' χ2 p-value for Mo17 x B73: '.2482135' Biased in favor of strain: '' |
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| GRMZM2G166855 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.96587 x 10-2 | 247 | 289 | 199 | 250 | 46.08% | 55.68% | 536 | 449 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0696587' χ2 p-value for Mo17 x B73: '.0160913' Biased in favor of strain: '' |
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| GRMZM2G166833 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.607 x 10-4 | 217 | 23 | 80 | 40 | 90.42% | 33.33% | 240 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.61e-36' χ2 p-value for Mo17 x B73: '.0002607' Biased in favor of strain: 'B73' |
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| GRMZM2G166833 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5080 | 399 | 1613 | 1086 | 92.72% | 40.24% | 5479 | 2699 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166780 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1578 | 301 | 852 | 786 | 83.98% | 47.99% | 1879 | 1638 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166780 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1929 | 749 | 1599 | 761 | 72.03% | 32.25% | 2678 | 2360 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166776 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 18 | 15 | 8 | 8 | 54.55% | 50.00% | 33 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6015081' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G166776 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 5 | 1 | 33.33% | 16.67% | 6 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G166767 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.45 x 10-6 | 479 | 152 | 232 | 309 | 75.91% | 57.12% | 631 | 541 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.39e-07' χ2 p-value for Mo17 x B73: '2.45e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G166767 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.66 x 10-11 | 617 | 346 | 566 | 361 | 64.07% | 38.94% | 963 | 927 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.48e-18' χ2 p-value for Mo17 x B73: '1.66e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G166759 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.166645 x 10-1 | 79 | 45 | 60 | 44 | 63.71% | 42.31% | 124 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022635' χ2 p-value for Mo17 x B73: '.1166645' Biased in favor of strain: '' |
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| GRMZM2G166759 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.03 x 10-7 | 174 | 34 | 93 | 71 | 83.65% | 43.29% | 208 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '2.16e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G166738 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.94278 x 10-2 | 275 | 180 | 139 | 227 | 60.44% | 62.02% | 455 | 366 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0048349' χ2 p-value for Mo17 x B73: '.0594278' Biased in favor of strain: '' |
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| GRMZM2G166738 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.34 x 10-24 | 882 | 503 | 1294 | 684 | 63.68% | 34.58% | 1385 | 1978 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.34e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166719 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.637029 x 10-1 | 0 | 11 | 7 | 5 | 0.00% | 41.67% | 11 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G166719 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 5 | 4 | 50.00% | 44.44% | 2 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM2G166718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16169 x 10-2 | 7 | 21 | 20 | 18 | 25.00% | 47.37% | 28 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.91e-06' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: '' |
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| GRMZM2G166718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.48614 x 10-1 | 12 | 31 | 34 | 47 | 27.91% | 58.02% | 43 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0037618' χ2 p-value for Mo17 x B73: '.148614' Biased in favor of strain: '' |
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| GRMZM2G166711 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.68567 x 10-2 | 27 | 13 | 26 | 49 | 67.50% | 65.33% | 40 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268567' χ2 p-value for Mo17 x B73: '.0079118' Biased in favor of strain: '' |
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| GRMZM2G166711 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 1 | 23 | 66.67% | 95.83% | 9 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999862' χ2 p-value for Mo17 x B73: '.0024367' Biased in favor of strain: '' |
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| GRMZM2G166701 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.206712 x 10-1 | 29 | 9 | 20 | 28 | 76.32% | 58.33% | 38 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2070346' χ2 p-value for Mo17 x B73: '.2206712' Biased in favor of strain: '' |
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| GRMZM2G166701 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.986976 x 10-1 | 41 | 53 | 33 | 42 | 43.62% | 56.00% | 94 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2158253' χ2 p-value for Mo17 x B73: '.2986976' Biased in favor of strain: '' |
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| GRMZM2G166695 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.698154 x 10-1 | 16 | 11 | 10 | 12 | 59.26% | 54.55% | 27 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3359238' χ2 p-value for Mo17 x B73: '.6698154' Biased in favor of strain: '' |
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| GRMZM2G166695 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 10 | 10 | 50.00% | 50.00% | 8 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.1138462' Biased in favor of strain: '' |
|||||
| GRMZM2G166671 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.299627 x 10-1 | 50 | 18 | 26 | 20 | 73.53% | 43.48% | 68 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2299627' χ2 p-value for Mo17 x B73: '.0008492' Biased in favor of strain: '' |
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| GRMZM2G166671 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06621 x 10-1 | 64 | 47 | 75 | 56 | 57.66% | 42.75% | 111 | 131 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.106621' χ2 p-value for Mo17 x B73: '.0969069' Biased in favor of strain: '' |
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| GRMZM2G166665 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.840882 x 10-1 | 9 | 1 | 14 | 19 | 90.00% | 57.58% | 10 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.3840882' Biased in favor of strain: '' |
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| GRMZM2G166665 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 22 | 15 | 100.00% | 40.54% | 5 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0007485' Biased in favor of strain: '' |
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| GRMZM2G166659 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.92 x 10-6 | 2062 | 842 | 1107 | 1862 | 71.01% | 62.71% | 2904 | 2969 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.06e-07' χ2 p-value for Mo17 x B73: '4.92e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G166659 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.13 x 10-6 | 1123 | 890 | 1141 | 920 | 55.79% | 44.64% | 2013 | 2061 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.07e-07' χ2 p-value for Mo17 x B73: '1.13e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G166658 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1476 | 348 | 1259 | 356 | 80.92% | 22.04% | 1824 | 1615 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166658 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9539 x 10-3 | 99 | 26 | 96 | 68 | 79.20% | 41.46% | 125 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0029539' χ2 p-value for Mo17 x B73: '7.55e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G166622 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G166622 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 3 | 1 | 100.00% | 25.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G166597 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.128816 x 10-1 | 231 | 156 | 129 | 121 | 59.69% | 48.40% | 387 | 250 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001376' χ2 p-value for Mo17 x B73: '.6128816' Biased in favor of strain: '' |
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| GRMZM2G166597 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.415979 x 10-1 | 179 | 73 | 86 | 136 | 71.03% | 61.26% | 252 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1415979' χ2 p-value for Mo17 x B73: '.0875464' Biased in favor of strain: '' |
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| GRMZM2G166572 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G166572 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 2 | 2 | 80.00% | 50.00% | 5 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G166548 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2904 x 10-3 | 24 | 3 | 16 | 4 | 88.89% | 20.00% | 27 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000531' χ2 p-value for Mo17 x B73: '.0072904' Biased in favor of strain: 'B73' |
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| GRMZM2G166548 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.256 x 10-4 | 30 | 1 | 15 | 7 | 96.77% | 31.82% | 31 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003766' χ2 p-value for Mo17 x B73: '.0005256' Biased in favor of strain: 'B73' |
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| GRMZM2G166524 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 4 | 7 | 75.00% | 63.64% | 8 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170834' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: '' |
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| GRMZM2G166524 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.973053 x 10-1 | 255 | 232 | 161 | 188 | 52.36% | 53.87% | 487 | 349 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2973053' χ2 p-value for Mo17 x B73: '.1483801' Biased in favor of strain: '' |
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| GRMZM2G166507 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.582994 x 10-1 | 279 | 293 | 196 | 215 | 48.78% | 52.31% | 572 | 411 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5582994' χ2 p-value for Mo17 x B73: '.3486552' Biased in favor of strain: '' |
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| GRMZM2G166507 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 4.27 x 10-18 | 21 | 69 | 108 | 58 | 23.33% | 34.94% | 90 | 166 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.76e-18' χ2 p-value for Mo17 x B73: '4.27e-18' Biased in favor of strain: '' |
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| GRMZM2G166484 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 3 | 6 | 57.14% | 66.67% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929702' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G166484 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 4 | 0 | 1 | 20.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G166459 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14 x 10-5 | 38 | 8 | 47 | 13 | 82.61% | 21.67% | 46 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.72e-06' χ2 p-value for Mo17 x B73: '.0000114' Biased in favor of strain: 'B73' |
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| GRMZM2G166459 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G166452 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.26009 x 10-2 | 57 | 10 | 25 | 31 | 85.07% | 55.36% | 67 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013921' χ2 p-value for Mo17 x B73: '.0726009' Biased in favor of strain: '' |
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| GRMZM2G166452 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 82 | 68 | 91 | 78 | 54.67% | 46.15% | 150 | 169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2529991' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G166441 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.23 x 10-21 | 1083 | 587 | 869 | 517 | 64.85% | 37.30% | 1670 | 1386 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.70e-34' χ2 p-value for Mo17 x B73: '3.23e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G166441 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1559 | 399 | 965 | 891 | 79.62% | 48.01% | 1958 | 1856 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.03e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166430 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 1 | 6 | 4 | 88.89% | 40.00% | 9 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.157302' χ2 p-value for Mo17 x B73: '.0736382' Biased in favor of strain: '' |
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| GRMZM2G166430 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.418 x 10-4 | 155 | 99 | 117 | 58 | 61.02% | 33.14% | 254 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004418' χ2 p-value for Mo17 x B73: '8.20e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G166364 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 11 | 0 | 28 | 0 | 100.00% | 0.00% | 11 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G166364 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G166355 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.069937 x 10-1 | 42 | 27 | 38 | 61 | 60.87% | 61.62% | 69 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3069937' χ2 p-value for Mo17 x B73: '.2864218' Biased in favor of strain: '' |
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| GRMZM2G166355 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.903 x 10-4 | 95 | 52 | 69 | 31 | 64.63% | 31.00% | 147 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003903' χ2 p-value for Mo17 x B73: '.0001447' Biased in favor of strain: 'B73' |
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| GRMZM2G166348 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 2 | 0.00% | 100.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G166348 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G166345 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2270 | 459 | 1022 | 809 | 83.18% | 44.18% | 2729 | 1831 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G166345 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.866 x 10-4 | 1297 | 1042 | 1033 | 870 | 55.45% | 45.72% | 2339 | 1903 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.35e-07' χ2 p-value for Mo17 x B73: '.0001866' Biased in favor of strain: 'B73' |
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| GRMZM2G166297 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.83 x 10-3 | 250 | 185 | 281 | 209 | 57.47% | 42.65% | 435 | 490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.00183' χ2 p-value for Mo17 x B73: '.0011434' Biased in favor of strain: 'B73' |
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| GRMZM2G166297 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 4 | 0 | 100.00% | 0.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G166281 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.34 x 10-9 | 77 | 2 | 55 | 13 | 97.47% | 19.12% | 79 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.34e-09' χ2 p-value for Mo17 x B73: '8.97e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G166281 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.49 x 10-10 | 156 | 58 | 141 | 52 | 72.90% | 26.94% | 214 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-11' χ2 p-value for Mo17 x B73: '1.49e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G166234 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 22 | 6 | 85.71% | 21.43% | 7 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.0024969' Biased in favor of strain: '' |
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| GRMZM2G166234 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 31 | 5 | 100.00% | 13.89% | 3 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '1.85e-11' Biased in favor of strain: '' |