Displaying data sets 11601 - 11700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G50330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.69956 x 10-1 13 0 7 11 100.00% 61.11% 13 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.806561'
Avg. expression score for this sample: '16.0198'
Avg. expression score in LCM sample: '1.69026'
Tissue used: 'full endosperm'
AT5G50330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.00323 x 10-1 8 3 0 0 72.73% 11 0 TAIR8 Avg. embryo expression (dissected): '13.8095'
Avg. embryo expression (LCM): '23.9241'
AT5G50330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.60053 x 10-1 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50320 ELO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0802 x 10-2 48 8 85.71% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50320 ELO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 9 1 8 59.09% 88.89% 22 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.544587'
Avg. expression score for this sample: '69.9324'
Avg. expression score in LCM sample: '62.569'
Tissue used: 'pure endosperm, no chalazal'
AT5G50320 ELO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.69185 x 10-1 23 8 11 29 74.19% 72.50% 31 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.544587'
Avg. expression score for this sample: '61.1591'
Avg. expression score in LCM sample: '62.569'
Tissue used: 'full endosperm'
AT5G50320 ELO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.52705 x 10-1 24 21 6 7 53.33% 53.85% 45 13 TAIR8 Avg. embryo expression (dissected): '161.846'
Avg. embryo expression (LCM): '182.212'
AT5G50320 ELO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.89049 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50320 ELO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.02458 x 10-1 34 7 82.93% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-10 263 27 90.69% 290 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.66024 x 10-1 70 31 36 94 69.31% 72.31% 101 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08291'
Avg. expression score for this sample: '121.017'
Avg. expression score in LCM sample: '10.5384'
Tissue used: 'pure endosperm, no chalazal'
AT5G50310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.50366 x 10-1 90 27 43 98 76.92% 69.50% 117 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08291'
Avg. expression score for this sample: '153.185'
Avg. expression score in LCM sample: '10.5384'
Tissue used: 'full endosperm'
AT5G50310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.92025 x 10-1 76 80 27 21 48.72% 43.75% 156 48 TAIR8 Avg. embryo expression (dissected): '179.599'
Avg. embryo expression (LCM): '143.607'
AT5G50310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.63364 x 10-1 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.93403 x 10-1 127 58 68.65% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50300 AZG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50300 AZG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 0 40.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '4.74913'
Avg. expression score in LCM sample: '.720198'
Tissue used: 'pure endosperm, no chalazal'
AT5G50300 AZG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '5.47763'
Avg. expression score in LCM sample: '.720198'
Tissue used: 'full endosperm'
AT5G50300 AZG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.61215 x 10-1 9 9 0 6 50.00% 100.00% 18 6 TAIR8 Avg. embryo expression (dissected): '59.9485'
Avg. embryo expression (LCM): '70.2401'
AT5G50300 AZG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50300 AZG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.27156'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.02104'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G50290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50280 EMB1006 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3844 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50280 EMB1006 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.98381 x 10-1 1 4 4 2 20.00% 33.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '119.7'
Avg. expression score in LCM sample: '43.3442'
Tissue used: 'pure endosperm, no chalazal'
AT5G50280 EMB1006 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.04764 x 10-1 14 2 5 11 87.50% 68.75% 16 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '186.278'
Avg. expression score in LCM sample: '43.3442'
Tissue used: 'full endosperm'
AT5G50280 EMB1006 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 4 0 1 20.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '195.735'
Avg. embryo expression (LCM): '156.254'
AT5G50280 EMB1006 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50280 EMB1006 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4502 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.748 x 10-3 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.38433 x 10-1 7 2 1 7 77.78% 87.50% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389754'
Avg. expression score for this sample: '23.0682'
Avg. expression score in LCM sample: '21.8558'
Tissue used: 'pure endosperm, no chalazal'
AT5G50270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.0122 x 10-1 31 16 2 15 65.96% 88.24% 47 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389754'
Avg. expression score for this sample: '91.5465'
Avg. expression score in LCM sample: '21.8558'
Tissue used: 'full endosperm'
AT5G50270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '3.8752'
Avg. embryo expression (LCM): '0'
AT5G50270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.28363 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50260 CEP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-30 291 5 98.31% 296 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50260 CEP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.2962 x 10-1 472 239 305 746 66.39% 70.98% 711 1051 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.9e-11'
Avg. expression score for this sample: '2970.96'
Avg. expression score in LCM sample: '794.143'
Tissue used: 'pure endosperm, no chalazal'
AT5G50260 CEP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-15 615 193 161 711 76.11% 81.54% 808 872 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.9e-11'
Avg. expression score for this sample: '3181.78'
Avg. expression score in LCM sample: '794.143'
Tissue used: 'full endosperm'
AT5G50260 CEP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.5204 x 10-2 29 10 7 11 74.36% 61.11% 39 18 TAIR8 Avg. embryo expression (dissected): '178.014'
Avg. embryo expression (LCM): '31.8486'
AT5G50260 CEP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.53 x 10-4 335 77 81.31% 412 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50260 CEP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 406 2 99.51% 408 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50250 CP31B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-5 57 2 96.61% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50250 CP31B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.56455 x 10-1 34 8 23 43 80.95% 65.15% 42 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02522'
Avg. expression score for this sample: '6738.54'
Avg. expression score in LCM sample: '745.552'
Tissue used: 'pure endosperm, no chalazal'
AT5G50250 CP31B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.012 x 10-2 76 16 35 92 82.61% 72.44% 92 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02522'
Avg. expression score for this sample: '6606.85'
Avg. expression score in LCM sample: '745.552'
Tissue used: 'full endosperm'
AT5G50250 CP31B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 17 11 8 3 60.71% 27.27% 28 11 TAIR8 Avg. embryo expression (dissected): '3389.2'
Avg. embryo expression (LCM): '1198.98'
AT5G50250 CP31B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.08099 x 10-1 19 5 79.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50250 CP31B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8399 x 10-1 26 4 86.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50240 PIMT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50240 PIMT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.90605 x 10-1 16 5 4 9 76.19% 69.23% 21 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062563'
Avg. expression score for this sample: '67.4184'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50240 PIMT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0411 x 10-2 35 8 1 11 81.40% 91.67% 43 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062563'
Avg. expression score for this sample: '138.18'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50240 PIMT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 1 1 0.00% 50.00% 2 2 TAIR8 Avg. embryo expression (dissected): '26.0022'
Avg. embryo expression (LCM): '11.8804'
AT5G50240 PIMT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50240 PIMT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.20318 x 10-1 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 4 4 83.33% 50.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '323.163'
Avg. expression score in LCM sample: '100.519'
Tissue used: 'pure endosperm, no chalazal'
AT5G50230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 6 1 0 5 85.71% 100.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38084'
Avg. expression score for this sample: '227.547'
Avg. expression score in LCM sample: '100.519'
Tissue used: 'full endosperm'
AT5G50230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 1 2 0.00% 66.67% 2 3 TAIR8 Avg. embryo expression (dissected): '235.854'
Avg. embryo expression (LCM): '117.071'
AT5G50230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.44444 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7752 x 10-2 3 6 33.33% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.411'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.12822'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.40266'
Avg. embryo expression (LCM): '0'
AT5G50220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50210 QS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3714 x 10-2 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50210 QS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 3 5 100.00% 62.50% 1 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '106.503'
Avg. expression score in LCM sample: '79.9861'
Tissue used: 'pure endosperm, no chalazal'
AT5G50210 QS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 1 3 3 87.50% 50.00% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '153.73'
Avg. expression score in LCM sample: '79.9861'
Tissue used: 'full endosperm'
AT5G50210 QS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40071 x 10-1 3 9 1 1 25.00% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '138.01'
Avg. embryo expression (LCM): '125.536'
AT5G50210 QS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.67692 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50210 QS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50200 WR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50200 WR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50200 WR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.565155'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50200 WR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.24069'
Avg. embryo expression (LCM): '0'
AT5G50200 WR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50200 WR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G50190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.44505 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '50.8415'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'pure endosperm, no chalazal'
AT5G50180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 4 5 100.00% 55.56% 1 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '96.0807'
Avg. expression score in LCM sample: '9.95049'
Tissue used: 'full endosperm'
AT5G50180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '62.0537'
Avg. embryo expression (LCM): '31.8988'
AT5G50180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.65679'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.84773'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.930518'
Avg. embryo expression (LCM): '2.00937'
AT5G50175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'