| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G20780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.74581 x 10-1 | 173 | 44 | 79.72% | 217 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.65329 x 10-1 | 25 | 4 | 7 | 14 | 86.21% | 66.67% | 29 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008334' Avg. expression score for this sample: '36.9476' Avg. expression score in LCM sample: '26.8972' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20780 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.89073 x 10-1 | 12 | 15 | 0 | 0 | 44.44% | 27 | 0 | TAIR8 |
Avg. embryo expression (dissected): '28.8051' Avg. embryo expression (LCM): '20.5709' |
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| AT2G20780 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.67749 x 10-1 | 21 | 3 | 87.50% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20780 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.9516 x 10-2 | 25 | 2 | 9 | 34 | 92.59% | 79.07% | 27 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008334' Avg. expression score for this sample: '24.6523' Avg. expression score in LCM sample: '26.8972' Tissue used: 'full endosperm' |
|||||
| AT2G20780 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.2 x 10-11 | 418 | 6 | 98.58% | 424 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20770 | GCL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-5 | 184 | 16 | 92.00% | 200 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20770 | GCL2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.4 x 10-10 | 38 | 76 | 33.33% | 114 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20770 | GCL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.15886 x 10-1 | 52 | 6 | 18 | 7 | 89.66% | 28.00% | 58 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.206629' Avg. expression score for this sample: '17.2497' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||
| AT2G20770 | GCL2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.89414 x 10-1 | 35 | 11 | 17 | 5 | 76.09% | 22.73% | 46 | 22 | TAIR8 |
Avg. embryo expression (dissected): '26.3854' Avg. embryo expression (LCM): '13.0232' |
|||
| AT2G20770 | GCL2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.84773 x 10-1 | 18 | 4 | 3 | 11 | 81.82% | 78.57% | 22 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.206629' Avg. expression score for this sample: '11.3691' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G20770 | GCL2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.6 x 10-5 | 0 | 8 | 0.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.49804 x 10-1 | 174 | 58 | 75.00% | 232 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.94783 x 10-1 | 409 | 390 | 106 | 113 | 51.19% | 51.60% | 799 | 219 | TAIR8 |
Avg. embryo expression (dissected): '400.367' Avg. embryo expression (LCM): '317.355' |
||||
| AT2G20760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.4 x 10-17 | 881 | 164 | 161 | 397 | 84.31% | 71.15% | 1045 | 558 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.9e-26' Avg. expression score for this sample: '422.58' Avg. expression score in LCM sample: '141.159' Tissue used: 'full endosperm' |
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| AT2G20760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.7 x 10-11 | 702 | 172 | 202 | 545 | 80.32% | 72.96% | 874 | 747 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.9e-26' Avg. expression score for this sample: '413.329' Avg. expression score in LCM sample: '141.159' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1534 | 47 | 97.03% | 1581 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 512 | 142 | 78.29% | 654 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20750 | EXPB1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20750 | EXPB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.48 x 10-4 | 598 | 24 | 187 | 18 | 96.14% | 8.78% | 622 | 205 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.0e-09' Avg. expression score for this sample: '196.96' Avg. expression score in LCM sample: '86.6148' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G20750 | EXPB1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.81 x 10-4 | 740 | 199 | 471 | 121 | 78.81% | 20.44% | 939 | 592 | TAIR8 |
Avg. embryo expression (dissected): '616.638' Avg. embryo expression (LCM): '270.612' |
|||
| AT2G20750 | EXPB1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.7 x 10-19 | 10 | 46 | 17.86% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20750 | EXPB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.5 x 10-6 | 605 | 21 | 166 | 21 | 96.65% | 11.23% | 626 | 187 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '9.0e-09' Avg. expression score for this sample: '139.98' Avg. expression score in LCM sample: '86.6148' Tissue used: 'full endosperm' |
||||
| AT2G20750 | EXPB1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.2 x 10-5 | 38 | 0 | 100.00% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-7 | 423 | 69 | 85.98% | 492 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.952 x 10-3 | 344 | 78 | 81.52% | 422 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.1 x 10-5 | 272 | 100 | 80 | 303 | 73.12% | 79.11% | 372 | 383 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00018' Avg. expression score for this sample: '432.929' Avg. expression score in LCM sample: '166.072' Tissue used: 'full endosperm' |
|||||
| AT2G20740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.69445 x 10-1 | 25 | 33 | 6 | 10 | 43.10% | 62.50% | 58 | 16 | TAIR8 |
Avg. embryo expression (dissected): '97.9808' Avg. embryo expression (LCM): '46.1151' |
||||
| AT2G20740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.94707 x 10-1 | 81 | 42 | 32 | 83 | 65.85% | 72.17% | 123 | 115 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00018' Avg. expression score for this sample: '190.557' Avg. expression score in LCM sample: '166.072' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.9 x 10-9 | 119 | 6 | 95.20% | 125 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20725 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20725 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '540.824' Avg. embryo expression (LCM): '307.748' |
|||||
| AT2G20725 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 6 | 2 | 12 | 33.33% | 85.71% | 9 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '191.368' Avg. expression score in LCM sample: '211.635' Tissue used: 'full endosperm' |
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| AT2G20725 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.44444 x 10-1 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '346.546' Avg. expression score in LCM sample: '211.635' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G20725 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.5544 x 10-2 | 22 | 2 | 91.67% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20725 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.23115 x 10-1 | 11 | 3 | 78.57% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20723 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20723 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20723 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G20723 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20723 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G20723 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20722 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20722 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20722 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G20722 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G20722 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G20722 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20721 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20721 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G20721 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G20721 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.89449' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G20721 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20721 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G20720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-7 | 162 | 10 | 94.19% | 172 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.11429 x 10-1 | 8 | 17 | 7 | 32 | 32.00% | 82.05% | 25 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.017799' Avg. expression score for this sample: '121.843' Avg. expression score in LCM sample: '25.9271' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.00323 x 10-1 | 2 | 6 | 2 | 1 | 25.00% | 33.33% | 8 | 3 | TAIR8 |
Avg. embryo expression (dissected): '26.7029' Avg. embryo expression (LCM): '31.2457' |
||||
| AT2G20720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.42 x 10-4 | 37 | 0 | 100.00% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.363 x 10-3 | 35 | 23 | 18 | 134 | 60.34% | 88.16% | 58 | 152 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.017799' Avg. expression score for this sample: '85.5771' Avg. expression score in LCM sample: '25.9271' Tissue used: 'full endosperm' |
|||||
| AT2G20720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.63425 x 10-1 | 57 | 20 | 74.03% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.5 x 10-23 | 467 | 6 | 98.73% | 473 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.516 x 10-3 | 157 | 23 | 87.22% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.933 x 10-3 | 57 | 8 | 20 | 69 | 87.69% | 77.53% | 65 | 89 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.025863' Avg. expression score for this sample: '104.868' Avg. expression score in LCM sample: '13.1987' Tissue used: 'full endosperm' |
|||||
| AT2G20710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 57 | 65 | 18 | 26 | 46.72% | 59.09% | 122 | 44 | TAIR8 |
Avg. embryo expression (dissected): '287.749' Avg. embryo expression (LCM): '242.895' |
||||
| AT2G20710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 28 | 17 | 12 | 28 | 62.22% | 70.00% | 45 | 40 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.025863' Avg. expression score for this sample: '99.3281' Avg. expression score in LCM sample: '13.1987' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G20710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 19 | 5 | 79.17% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20700 | LLG2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20700 | LLG2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.43802' Avg. embryo expression (LCM): '1.82099' |
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| AT2G20700 | LLG2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '184.18' Avg. expression score in LCM sample: '6.40829' Tissue used: 'full endosperm' |
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| AT2G20700 | LLG2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '44.3288' Avg. expression score in LCM sample: '6.40829' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20700 | LLG2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20700 | LLG2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.49233 x 10-1 | 287 | 112 | 71.93% | 399 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.13873 x 10-1 | 253 | 114 | 90 | 191 | 68.94% | 67.97% | 367 | 281 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.377474' Avg. expression score for this sample: '368.747' Avg. expression score in LCM sample: '241.707' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.67099 x 10-1 | 404 | 344 | 80 | 59 | 54.01% | 42.45% | 748 | 139 | TAIR8 |
Avg. embryo expression (dissected): '742.208' Avg. embryo expression (LCM): '613.323' |
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| AT2G20690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 81 | 37 | 68.64% | 118 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.73991 x 10-1 | 301 | 154 | 178 | 402 | 66.15% | 69.31% | 455 | 580 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.377474' Avg. expression score for this sample: '443.173' Avg. expression score in LCM sample: '241.707' Tissue used: 'full endosperm' |
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| AT2G20690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 596 | 55 | 91.55% | 651 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20680 | MAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.685 x 10-3 | 309 | 44 | 87.54% | 353 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20680 | MAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.4 x 10-7 | 697 | 74 | 90.40% | 771 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20680 | MAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6 x 10-8 | 120 | 60 | 30 | 296 | 66.67% | 90.80% | 180 | 326 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.2e-09' Avg. expression score for this sample: '57.6176' Avg. expression score in LCM sample: '18.7398' Tissue used: 'full endosperm' |
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| AT2G20680 | MAN2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 42 | 53 | 3 | 15 | 44.21% | 83.33% | 95 | 18 | TAIR8 |
Avg. embryo expression (dissected): '33.3112' Avg. embryo expression (LCM): '8.32634' |
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| AT2G20680 | MAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.6739 x 10-2 | 55 | 25 | 16 | 85 | 68.75% | 84.16% | 80 | 101 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.2e-09' Avg. expression score for this sample: '30.9698' Avg. expression score in LCM sample: '18.7398' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20680 | MAN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-8 | 113 | 1 | 99.12% | 114 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G20670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.466 x 10-3 | 46 | 5 | 90.20% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.61998 x 10-1 | 14 | 24 | 0 | 4 | 36.84% | 100.00% | 38 | 4 | TAIR8 |
Avg. embryo expression (dissected): '36.2359' Avg. embryo expression (LCM): '1.00469' |
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| AT2G20670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.60512 x 10-1 | 70 | 49 | 36 | 152 | 58.82% | 80.85% | 119 | 188 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.219966' Avg. expression score for this sample: '77.6346' Avg. expression score in LCM sample: '50.6784' Tissue used: 'full endosperm' |
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| AT2G20670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 62 | 34 | 12 | 31 | 64.58% | 72.09% | 96 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.219966' Avg. expression score for this sample: '64.6624' Avg. expression score in LCM sample: '50.6784' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.06777 x 10-1 | 386 | 200 | 65.87% | 586 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.51 x 10-4 | 97 | 14 | 87.39% | 111 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20660 | RALFL14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G20660 | RALFL14 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G20660 | RALFL14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20660 | RALFL14 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.593207' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G20660 | RALFL14 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20660 | RALFL14 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.47387 x 10-1 | 18 | 0 | 100.00% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G20650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.30014 x 10-1 | 13 | 1 | 1 | 6 | 92.86% | 85.71% | 14 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.102211' Avg. expression score for this sample: '26.5298' Avg. expression score in LCM sample: '6.76104' Tissue used: 'full endosperm' |
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| AT2G20650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.40071 x 10-1 | 8 | 3 | 1 | 2 | 72.73% | 66.67% | 11 | 3 | TAIR8 |
Avg. embryo expression (dissected): '30.8688' Avg. embryo expression (LCM): '18.4737' |