Displaying data sets 116501 - 116600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G21070 FIO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.44759 x 10-1 34 31 6 15 52.31% 71.43% 65 21 TAIR8 Avg. embryo expression (dissected): '25.9596'
Avg. embryo expression (LCM): '22.9822'
AT2G21070 FIO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87039 x 10-1 28 15 6 27 65.12% 81.82% 43 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.519987'
Avg. expression score for this sample: '15.4022'
Avg. expression score in LCM sample: '18.4459'
Tissue used: 'pure endosperm, no chalazal'
AT2G21060 GRP2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.45189 x 10-1 1008 919 667 2193 52.31% 76.68% 1927 2860 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.0e-07'
Avg. expression score for this sample: '1915.57'
Avg. expression score in LCM sample: '1279.42'
Tissue used: 'pure endosperm, no chalazal'
AT2G21060 GRP2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0 x 10-23 737 125 85.50% 862 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21060 GRP2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-14 644 552 403 2165 53.85% 84.31% 1196 2568 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.0e-07'
Avg. expression score for this sample: '1000.46'
Avg. expression score in LCM sample: '1279.42'
Tissue used: 'full endosperm'
AT2G21060 GRP2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.2 x 10-5 1091 1617 543 692 40.29% 56.03% 2708 1235 TAIR8 Avg. embryo expression (dissected): '2697.28'
Avg. embryo expression (LCM): '1856.67'
AT2G21060 GRP2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2075 369 84.90% 2444 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21060 GRP2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-22 3112 1897 62.13% 5009 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21050 LAX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.89461 x 10-1 41 43 48.81% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21050 LAX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 19 40.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21050 LAX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.85068 x 10-1 100 76 41 25 56.82% 37.88% 176 66 TAIR8 Avg. embryo expression (dissected): '532.689'
Avg. embryo expression (LCM): '377.034'
AT2G21050 LAX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21050 LAX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.54622 x 10-1 13 4 5 0 76.47% 0.00% 17 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008275'
Avg. expression score for this sample: '24.839'
Avg. expression score in LCM sample: '.793687'
Tissue used: 'pure endosperm, no chalazal'
AT2G21050 LAX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.741 x 10-3 2 4 21 8 33.33% 27.59% 6 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008275'
Avg. expression score for this sample: '19.8878'
Avg. expression score in LCM sample: '.793687'
Tissue used: 'full endosperm'
AT2G21045 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.230522'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21045 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21045 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.05362'
Avg. embryo expression (LCM): '0'
AT2G21045 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21045 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21045 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.31916'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.01428'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.6075'
AT2G21030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '11.3255'
Avg. embryo expression (LCM): '13.4126'
AT2G21030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.386598'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.84873'
Avg. expression score in LCM sample: '1.91073'
Tissue used: 'full endosperm'
AT2G21010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.89011'
Avg. embryo expression (LCM): '3.26523'
AT2G21010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.02454'
Avg. expression score in LCM sample: '1.91073'
Tissue used: 'pure endosperm, no chalazal'
AT2G20990 SYTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.59964 x 10-1 58 54 20 137 51.79% 87.26% 112 157 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054665'
Avg. expression score for this sample: '224.013'
Avg. expression score in LCM sample: '257.287'
Tissue used: 'pure endosperm, no chalazal'
AT2G20990 SYTA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-6 61 2 96.83% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20990 SYTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10752 x 10-1 75 47 63 197 61.48% 75.77% 122 260 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054665'
Avg. expression score for this sample: '228.366'
Avg. expression score in LCM sample: '257.287'
Tissue used: 'full endosperm'
AT2G20990 SYTA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.1329 x 10-2 35 96 12 33 26.72% 73.33% 131 45 TAIR8 Avg. embryo expression (dissected): '215.284'
Avg. embryo expression (LCM): '204.629'
AT2G20990 SYTA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0046 x 10-2 255 69 78.70% 324 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20990 SYTA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-5 225 42 84.27% 267 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20980 MCM10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.313 x 10-2 24 14 63.16% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20980 MCM10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.24019 x 10-1 120 24 83.33% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20980 MCM10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.82057 x 10-1 3 16 4 6 15.79% 60.00% 19 10 TAIR8 Avg. embryo expression (dissected): '18.88'
Avg. embryo expression (LCM): '20.6589'
AT2G20980 MCM10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20980 MCM10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.20891 x 10-1 5 4 0 16 55.56% 100.00% 9 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054347'
Avg. expression score for this sample: '9.02957'
Avg. expression score in LCM sample: '7.7311'
Tissue used: 'pure endosperm, no chalazal'
AT2G20980 MCM10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.65322 x 10-1 0 0 3 20 86.96% 0 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.054347'
Avg. expression score for this sample: '6.10189'
Avg. expression score in LCM sample: '7.7311'
Tissue used: 'full endosperm'
AT2G20970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 3 0 1 40.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.23202'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G20970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.45455 x 10-1 5 1 0 0 83.33% 6 0 TAIR8 Avg. embryo expression (dissected): '5.31417'
Avg. embryo expression (LCM): '0'
AT2G20970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.995991'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G20970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.64286 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20960 pEARLI4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.68 x 10-4 99 23 81.15% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20960 pEARLI4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.8 x 10-12 96 5 95.05% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20960 pEARLI4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.6296 x 10-2 188 79 59 163 70.41% 73.42% 267 222 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.627758'
Avg. expression score for this sample: '74.439'
Avg. expression score in LCM sample: '4.07132'
Tissue used: 'pure endosperm, no chalazal'
AT2G20960 pEARLI4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6248 x 10-2 66 18 78.57% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20960 pEARLI4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.9096 x 10-2 174 102 155 229 63.04% 59.64% 276 384 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.627758'
Avg. expression score for this sample: '85.7963'
Avg. expression score in LCM sample: '4.07132'
Tissue used: 'full endosperm'
AT2G20960 pEARLI4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.49575 x 10-1 572 570 128 160 50.09% 55.56% 1142 288 TAIR8 Avg. embryo expression (dissected): '351.022'
Avg. embryo expression (LCM): '81.4675'
AT2G20950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7622 x 10-2 75 38 20 27 66.37% 57.45% 113 47 TAIR8 Avg. embryo expression (dissected): '56.9321'
Avg. embryo expression (LCM): '28.2066'
AT2G20950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.80689 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.28235 x 10-1 39 16 18 14 70.91% 43.75% 55 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.820742'
Avg. expression score for this sample: '20.3912'
Avg. expression score in LCM sample: '23.7665'
Tissue used: 'pure endosperm, no chalazal'
AT2G20950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.50616 x 10-1 39 11 11 30 78.00% 73.17% 50 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.820742'
Avg. expression score for this sample: '13.3966'
Avg. expression score in LCM sample: '23.7665'
Tissue used: 'full endosperm'
AT2G20950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4479 x 10-2 54 10 84.38% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-6 102 9 91.89% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0372 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.54622 x 10-1 9 1 8 4 90.00% 33.33% 10 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.7561'
Avg. expression score in LCM sample: '4.39468'
Tissue used: 'full endosperm'
AT2G20940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.83034 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 9 6 1 1 60.00% 50.00% 15 2 TAIR8 Avg. embryo expression (dissected): '44.3873'
Avg. embryo expression (LCM): '67.5777'
AT2G20940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 3 75.00% 75.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.849'
Avg. expression score in LCM sample: '4.39468'
Tissue used: 'pure endosperm, no chalazal'
AT2G20930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '71.4802'
Avg. expression score in LCM sample: '10.9206'
Tissue used: 'pure endosperm, no chalazal'
AT2G20930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '61.6323'
Avg. expression score in LCM sample: '10.9206'
Tissue used: 'full endosperm'
AT2G20930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '57.7617'
Avg. embryo expression (LCM): '46.6551'
AT2G20930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20921 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20921 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20921 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '22.4427'
Avg. embryo expression (LCM): '37.1232'
AT2G20921 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20921 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.88217'
Avg. expression score in LCM sample: '7.24607'
Tissue used: 'pure endosperm, no chalazal'
AT2G20921 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.4778'
Avg. expression score in LCM sample: '7.24607'
Tissue used: 'full endosperm'
AT2G20920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6403 x 10-2 216 123 114 388 63.72% 77.29% 339 502 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.094651'
Avg. expression score for this sample: '504.8'
Avg. expression score in LCM sample: '275.41'
Tissue used: 'full endosperm'
AT2G20920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.0 x 10-7 68 4 94.44% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.06846 x 10-1 45 53 22 26 45.92% 54.17% 98 48 TAIR8 Avg. embryo expression (dissected): '670.525'
Avg. embryo expression (LCM): '238.927'
AT2G20920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.11636 x 10-1 113 69 53 118 62.09% 69.01% 182 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.094651'
Avg. expression score for this sample: '805.905'
Avg. expression score in LCM sample: '275.41'
Tissue used: 'pure endosperm, no chalazal'
AT2G20920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4 x 10-16 200 13 93.90% 213 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-23 268 13 95.37% 281 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20900 DGK5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.18881 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20900 DGK5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.30468 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20900 DGK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '49.3013'
Avg. expression score in LCM sample: '18.2989'
Tissue used: 'pure endosperm, no chalazal'
AT2G20900 DGK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G20900 DGK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.92075 x 10-1 1 2 2 2 33.33% 50.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.592075'
Avg. expression score for this sample: '67.6507'
Avg. expression score in LCM sample: '18.2989'
Tissue used: 'full endosperm'
AT2G20900 DGK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '34.5892'
Avg. embryo expression (LCM): '30.5927'
AT2G20890 PSB29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1642.81'
Avg. embryo expression (LCM): '1116.77'
AT2G20890 PSB29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'