| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G21195 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21195 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21195 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '16.1864' Avg. embryo expression (LCM): '32.7151' |
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| AT2G21195 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '13.9889' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21195 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21195 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '35.9324' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G21190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.89847 x 10-1 | 7 | 0 | 2 | 6 | 100.00% | 75.00% | 7 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.447032' Avg. expression score for this sample: '55.3686' Avg. expression score in LCM sample: '43.4176' Tissue used: 'full endosperm' |
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| AT2G21190 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.14286 x 10-1 | 2 | 0 | 0 | 2 | 100.00% | 100.00% | 2 | 2 | TAIR8 |
Avg. embryo expression (dissected): '53.9026' Avg. embryo expression (LCM): '84.3183' |
||||
| AT2G21190 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.33613 x 10-1 | 16 | 0 | 100.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 2 | 100.00% | 66.67% | 1 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.447032' Avg. expression score for this sample: '33.8155' Avg. expression score in LCM sample: '43.4176' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G21190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 1 | 90.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21188 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.6941 x 10-2 | 5 | 10 | 33.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21188 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.10777 x 10-1 | 7 | 1 | 0 | 3 | 87.50% | 100.00% | 8 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '19.6432' Avg. expression score in LCM sample: '3.99783' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21188 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.04585' Avg. embryo expression (LCM): '0' |
||||||
| AT2G21188 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 18 | 0 | 14 | 6 | 100.00% | 30.00% | 18 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '44.7945' Avg. expression score in LCM sample: '3.99783' Tissue used: 'full endosperm' |
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| AT2G21188 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.9283 x 10-2 | 3 | 6 | 33.33% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21188 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.286 x 10-3 | 17 | 0 | 100.00% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21187 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21187 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '13.819' Avg. embryo expression (LCM): '2.43636' |
||||||
| AT2G21187 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '95.2667' Avg. expression score in LCM sample: '17.1231' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21187 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21187 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '85.9148' Avg. expression score in LCM sample: '17.1231' Tissue used: 'full endosperm' |
|||||||
| AT2G21187 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21185 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21185 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '77.746' Avg. expression score in LCM sample: '9.62713' Tissue used: 'full endosperm' |
|||||||
| AT2G21185 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.50611' Avg. embryo expression (LCM): '2.05961' |
||||||
| AT2G21185 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21185 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21185 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '87.8925' Avg. expression score in LCM sample: '9.62713' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G21180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.8 x 10-11 | 65 | 0 | 0 | 24 | 100.00% | 100.00% | 65 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '75.083' Avg. expression score in LCM sample: '6.12903' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.373 x 10-2 | 8 | 0 | 0 | 3 | 100.00% | 100.00% | 8 | 3 | TAIR8 |
Avg. embryo expression (dissected): '11.6213' Avg. embryo expression (LCM): '0' |
||||
| AT2G21180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 227 | 1 | 2 | 428 | 99.56% | 99.53% | 228 | 430 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '248.569' Avg. expression score in LCM sample: '6.12903' Tissue used: 'full endosperm' |
|||||
| AT2G21180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 61 | 0 | 100.00% | 61 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.57798 x 10-1 | 428 | 0 | 100.00% | 428 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.55145 x 10-1 | 360 | 0 | 100.00% | 360 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21170 | TIM | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-5 | 69 | 6 | 92.00% | 75 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G21170 | TIM | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.142 x 10-3 | 69 | 13 | 84.15% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G21170 | TIM | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.45403 x 10-1 | 58 | 41 | 14 | 10 | 58.59% | 41.67% | 99 | 24 | TAIR8 |
Avg. embryo expression (dissected): '883.717' Avg. embryo expression (LCM): '620.997' |
|||
| AT2G21170 | TIM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.47823 x 10-1 | 23 | 14 | 5 | 20 | 62.16% | 80.00% | 37 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.429763' Avg. expression score for this sample: '431.367' Avg. expression score in LCM sample: '134.104' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G21170 | TIM | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.25345 x 10-1 | 27 | 7 | 79.41% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G21170 | TIM | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.36292 x 10-1 | 88 | 54 | 39 | 127 | 61.97% | 76.51% | 142 | 166 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.429763' Avg. expression score for this sample: '432.436' Avg. expression score in LCM sample: '134.104' Tissue used: 'full endosperm' |
||||
| AT2G21160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.87433 x 10-1 | 281 | 133 | 224 | 473 | 67.87% | 67.86% | 414 | 697 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.549446' Avg. expression score for this sample: '2234.16' Avg. expression score in LCM sample: '562.328' Tissue used: 'full endosperm' |
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| AT2G21160 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.37766 x 10-1 | 132 | 116 | 46 | 33 | 53.23% | 41.77% | 248 | 79 | TAIR8 |
Avg. embryo expression (dissected): '2145.83' Avg. embryo expression (LCM): '1526.85' |
||||
| AT2G21160 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.8 x 10-20 | 597 | 99 | 85.78% | 696 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.59666 x 10-1 | 71 | 30 | 70.30% | 101 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.65211 x 10-1 | 112 | 46 | 56 | 100 | 70.89% | 64.10% | 158 | 156 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.549446' Avg. expression score for this sample: '1238.86' Avg. expression score in LCM sample: '562.328' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.3 x 10-8 | 574 | 152 | 79.06% | 726 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21150 | XCT | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21150 | XCT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '216.925' Avg. expression score in LCM sample: '70.3295' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21150 | XCT | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '332.093' Avg. embryo expression (LCM): '326.95' |
|||||
| AT2G21150 | XCT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '221.024' Avg. expression score in LCM sample: '70.3295' Tissue used: 'full endosperm' |
||||||
| AT2G21150 | XCT | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21150 | XCT | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21140 | PRP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G21140 | PRP2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.459733' Avg. embryo expression (LCM): '0' |
||||
| AT2G21140 | PRP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.815319' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21140 | PRP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21140 | PRP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.53207' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G21140 | PRP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G21130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1171 | 606 | 65.90% | 1777 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 3358 | 9102 | 1828 | 36345 | 26.95% | 95.21% | 12460 | 38173 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '8530.3' Avg. expression score in LCM sample: '1108.52' Tissue used: 'full endosperm' |
|||||
| AT2G21130 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 0.0 | 2282 | 9326 | 476 | 2039 | 19.66% | 81.07% | 11608 | 2515 | TAIR8 |
Avg. embryo expression (dissected): '5606.52' Avg. embryo expression (LCM): '1891.32' |
||||
| AT2G21130 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.81417 x 10-1 | 1301 | 353 | 78.66% | 1654 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 8237 | 442 | 94.91% | 8679 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 4147 | 9374 | 1995 | 41944 | 30.67% | 95.46% | 13521 | 43939 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15572.4' Avg. expression score in LCM sample: '1108.52' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G21120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.9092 x 10-2 | 76 | 14 | 28 | 58 | 84.44% | 67.44% | 90 | 86 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.0e-11' Avg. expression score for this sample: '52.7287' Avg. expression score in LCM sample: '16.6233' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.16115 x 10-1 | 61 | 35 | 20 | 12 | 63.54% | 37.50% | 96 | 32 | TAIR8 |
Avg. embryo expression (dissected): '66.564' Avg. embryo expression (LCM): '25.4186' |
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| AT2G21120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.0 x 10-11 | 162 | 37 | 31 | 227 | 81.41% | 87.98% | 199 | 258 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.0e-11' Avg. expression score for this sample: '103.983' Avg. expression score in LCM sample: '16.6233' Tissue used: 'full endosperm' |
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| AT2G21120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.7259 x 10-1 | 28 | 9 | 75.68% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.0 x 10-5 | 469 | 46 | 91.07% | 515 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.96743 x 10-1 | 345 | 64 | 84.35% | 409 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 2 | 80.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G21110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.915767' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 1 | 1 | 1 | 87.50% | 50.00% | 8 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.15083' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G21100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 9.0226 x 10-2 | 0 | 0 | 0 | 11 | 100.00% | 0 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.090226' Avg. expression score for this sample: '8.45931' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G21100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G21100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G21100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.090226' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.5 x 10-5 | 276 | 62 | 81.66% | 338 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.38917 x 10-1 | 62 | 44 | 31 | 78 | 58.49% | 71.56% | 106 | 109 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.416782' Avg. expression score for this sample: '28.5627' Avg. expression score in LCM sample: '22.091' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.66025 x 10-1 | 116 | 124 | 19 | 22 | 48.33% | 53.66% | 240 | 41 | TAIR8 |
Avg. embryo expression (dissected): '49.7748' Avg. embryo expression (LCM): '73.6561' |
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| AT2G21090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4676 x 10-1 | 72 | 41 | 38 | 136 | 63.72% | 78.16% | 113 | 174 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.416782' Avg. expression score for this sample: '29.2707' Avg. expression score in LCM sample: '22.091' Tissue used: 'full endosperm' |
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| AT2G21090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-6 | 50 | 2 | 96.15% | 52 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.73 x 10-4 | 307 | 76 | 80.16% | 383 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.2745 x 10-2 | 25 | 2 | 92.59% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 4 | 1 | 0 | 60.00% | 0.00% | 10 | 1 | TAIR8 |
Avg. embryo expression (dissected): '9.3126' Avg. embryo expression (LCM): '2.47404' |
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| AT2G21080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 0 | 5 | 4 | 100.00% | 44.44% | 8 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.255853' Avg. expression score for this sample: '6.60948' Avg. expression score in LCM sample: '2.89549' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G21080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.681 x 10-3 | 0 | 5 | 0.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.64086 x 10-1 | 35 | 4 | 7 | 2 | 89.74% | 22.22% | 39 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.255853' Avg. expression score for this sample: '12.8521' Avg. expression score in LCM sample: '2.89549' Tissue used: 'full endosperm' |
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| AT2G21080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.91002 x 10-1 | 7 | 5 | 58.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G21070 | FIO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.673 x 10-3 | 78 | 15 | 83.87% | 93 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G21070 | FIO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.29161 x 10-1 | 66 | 24 | 38 | 68 | 73.33% | 64.15% | 90 | 106 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.519987' Avg. expression score for this sample: '29.0379' Avg. expression score in LCM sample: '18.4459' Tissue used: 'full endosperm' |
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| AT2G21070 | FIO1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.44759 x 10-1 | 34 | 31 | 6 | 15 | 52.31% | 71.43% | 65 | 21 | TAIR8 |
Avg. embryo expression (dissected): '25.9596' Avg. embryo expression (LCM): '22.9822' |
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| AT2G21070 | FIO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.8 x 10-6 | 112 | 13 | 89.60% | 125 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |