Displaying data sets 116201 - 116300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G21510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.348 x 10-3 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 7 69.57% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.4 x 10-5 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7 x 10-12 111 7 94.07% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.2718 x 10-2 113 64 100 119 63.84% 54.34% 177 219 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '129.594'
Avg. expression score in LCM sample: '33.2614'
Tissue used: 'pure endosperm, no chalazal'
AT2G21500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.88087 x 10-1 46 23 19 9 66.67% 32.14% 69 28 TAIR8 Avg. embryo expression (dissected): '61.4151'
Avg. embryo expression (LCM): '36.0431'
AT2G21500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.091 x 10-3 24 27 47.06% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7656 x 10-2 234 87 47 126 72.90% 72.83% 321 173 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '162.55'
Avg. expression score in LCM sample: '33.2614'
Tissue used: 'full endosperm'
AT2G21490 LEA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3 x 10-29 3694 2693 1910 3067 57.84% 61.62% 6387 4977 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-30'
Avg. expression score for this sample: '3340.88'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21490 LEA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.2938 x 10-2 1411 1317 442 545 51.72% 55.22% 2728 987 TAIR8 Avg. embryo expression (dissected): '2093.91'
Avg. embryo expression (LCM): '0'
AT2G21490 LEA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.4303 x 10-2 365 254 153 284 58.97% 64.99% 619 437 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-30'
Avg. expression score for this sample: '351.043'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21490 LEA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 1703 594 74.14% 2297 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21490 LEA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.934 x 10-3 341 297 53.45% 638 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21490 LEA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7045 x 10-2 541 425 56.00% 966 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.0909 x 10-2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '1.24974'
Avg. embryo expression (LCM): '0'
AT2G21480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '.542955'
Avg. expression score in LCM sample: '1.11704'
Tissue used: 'full endosperm'
AT2G21480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 0 0 0 7 100.00% 0 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '1.09425'
Avg. expression score in LCM sample: '1.11704'
Tissue used: 'pure endosperm, no chalazal'
AT2G21470 SAE2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.36494 x 10-1 77 38 30 69 66.96% 69.70% 115 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062864'
Avg. expression score for this sample: '51.2705'
Avg. expression score in LCM sample: '31.7328'
Tissue used: 'pure endosperm, no chalazal'
AT2G21470 SAE2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 108 101 38 29 51.67% 43.28% 209 67 TAIR8 Avg. embryo expression (dissected): '86.7875'
Avg. embryo expression (LCM): '107.401'
AT2G21470 SAE2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.3998 x 10-2 40 8 83.33% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21470 SAE2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8819 x 10-2 164 44 73 156 78.85% 68.12% 208 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062864'
Avg. expression score for this sample: '72.6897'
Avg. expression score in LCM sample: '31.7328'
Tissue used: 'full endosperm'
AT2G21470 SAE2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-21 404 27 93.74% 431 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21470 SAE2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-6 150 119 55.76% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21465 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21465 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21465 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21465 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21450 CHR34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.78155 x 10-1 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21450 CHR34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 2 0 66.67% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '2.53927'
Avg. embryo expression (LCM): '.477226'
AT2G21450 CHR34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.95173 x 10-1 45 28 23 29 61.64% 55.77% 73 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004789'
Avg. expression score for this sample: '82.0837'
Avg. expression score in LCM sample: '13.2722'
Tissue used: 'full endosperm'
AT2G21450 CHR34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.82 x 10-4 10 19 16 6 34.48% 27.27% 29 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004789'
Avg. expression score for this sample: '49.098'
Avg. expression score in LCM sample: '13.2722'
Tissue used: 'pure endosperm, no chalazal'
AT2G21450 CHR34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-10 46 1 97.87% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21450 CHR34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3 x 10-7 28 1 96.55% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.33766 x 10-1 56 20 73.68% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 44 19 69.84% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 9 4 8 70.00% 66.67% 30 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.591034'
Avg. expression score for this sample: '275.995'
Avg. expression score in LCM sample: '47.5331'
Tissue used: 'pure endosperm, no chalazal'
AT2G21440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.16696 x 10-1 35 29 3 4 54.69% 57.14% 64 7 TAIR8 Avg. embryo expression (dissected): '569.083'
Avg. embryo expression (LCM): '480.767'
AT2G21440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.81488 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.22315 x 10-1 32 16 9 29 66.67% 76.32% 48 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.591034'
Avg. expression score for this sample: '292.953'
Avg. expression score in LCM sample: '47.5331'
Tissue used: 'full endosperm'
AT2G21430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '60.1624'
Avg. expression score in LCM sample: '22.0469'
Tissue used: 'full endosperm'
AT2G21430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.5362'
Avg. embryo expression (LCM): '10.4613'
AT2G21430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.6239'
Avg. expression score in LCM sample: '22.0469'
Tissue used: 'pure endosperm, no chalazal'
AT2G21430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-29 1157 39 96.74% 1196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0759 x 10-2 251 34 88.07% 285 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3 x 10-12 0 15 0.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.72 x 10-4 28 4 1 7 87.50% 87.50% 32 8 TAIR8 Avg. embryo expression (dissected): '17.5024'
Avg. embryo expression (LCM): '0'
AT2G21420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.25782 x 10-1 12 5 37 91 70.59% 71.09% 17 128 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-24'
Avg. expression score for this sample: '27.6243'
Avg. expression score in LCM sample: '539.134'
Tissue used: 'full endosperm'
AT2G21420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3 x 10-26 620 70 99 366 89.86% 78.71% 690 465 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-24'
Avg. expression score for this sample: '403.115'
Avg. expression score in LCM sample: '539.134'
Tissue used: 'pure endosperm, no chalazal'
AT2G21410 VHA-A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.4873 x 10-1 40 14 23 20 74.07% 46.51% 54 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.699869'
Avg. expression score for this sample: '66.1421'
Avg. expression score in LCM sample: '73.4308'
Tissue used: 'pure endosperm, no chalazal'
AT2G21410 VHA-A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0759 x 10-2 26 7 6 5 78.79% 45.45% 33 11 TAIR8 Avg. embryo expression (dissected): '56.7147'
Avg. embryo expression (LCM): '20.3323'
AT2G21410 VHA-A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.34418 x 10-1 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21410 VHA-A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10542 x 10-1 51 13 27 58 79.69% 68.24% 64 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.699869'
Avg. expression score for this sample: '74.4249'
Avg. expression score in LCM sample: '73.4308'
Tissue used: 'full endosperm'
AT2G21410 VHA-A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-8 165 16 91.16% 181 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21410 VHA-A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.59148 x 10-1 143 61 70.10% 204 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21400 SRS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21400 SRS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21400 SRS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.734094'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21400 SRS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21400 SRS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21400 SRS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4402 x 10-2 97 23 80.83% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.55558 x 10-1 74 60 22 31 55.22% 58.49% 134 53 TAIR8 Avg. embryo expression (dissected): '367.062'
Avg. embryo expression (LCM): '224.409'
AT2G21390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-5 310 80 123 325 79.49% 72.54% 390 448 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001853'
Avg. expression score for this sample: '377.195'
Avg. expression score in LCM sample: '359.893'
Tissue used: 'full endosperm'
AT2G21390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.80142 x 10-1 107 61 54 104 63.69% 65.82% 168 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001853'
Avg. expression score for this sample: '403.342'
Avg. expression score in LCM sample: '359.893'
Tissue used: 'pure endosperm, no chalazal'
AT2G21390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-23 970 119 89.07% 1089 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.62795 x 10-1 831 315 72.51% 1146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21385 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9815 x 10-2 16 4 80.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21385 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-5 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21385 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.18027 x 10-1 13 13 9 17 50.00% 65.38% 26 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162883'
Avg. expression score for this sample: '30.4879'
Avg. expression score in LCM sample: '26.7061'
Tissue used: 'pure endosperm, no chalazal'
AT2G21385 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.31282 x 10-1 38 31 4 8 55.07% 66.67% 69 12 TAIR8 Avg. embryo expression (dissected): '61.1766'
Avg. embryo expression (LCM): '68.4442'
AT2G21385 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.38424 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21385 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.36141 x 10-1 14 7 18 18 66.67% 50.00% 21 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162883'
Avg. expression score for this sample: '58.3701'
Avg. expression score in LCM sample: '26.7061'
Tissue used: 'full endosperm'
AT2G21380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.71376 x 10-1 212 98 155 244 68.39% 61.15% 310 399 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.674395'
Avg. expression score for this sample: '155.6'
Avg. expression score in LCM sample: '76.6055'
Tissue used: 'full endosperm'
AT2G21380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.01202 x 10-1 64 42 21 22 60.38% 51.16% 106 43 TAIR8 Avg. embryo expression (dissected): '88.8394'
Avg. embryo expression (LCM): '57.4053'
AT2G21380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.49896 x 10-1 202 80 100 176 71.63% 63.77% 282 276 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.674395'
Avg. expression score for this sample: '180.393'
Avg. expression score in LCM sample: '76.6055'
Tissue used: 'pure endosperm, no chalazal'
AT2G21380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.23597 x 10-1 49 29 62.82% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 619 9 98.57% 628 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.0 x 10-10 181 29 86.19% 210 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21370 XK-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.70653 x 10-1 18 11 62.07% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21370 XK-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.491 x 10-3 29 3 90.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21370 XK-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21370 XK-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.21552 x 10-1 17 15 15 3 53.12% 16.67% 32 18 TAIR8 Avg. embryo expression (dissected): '38.7801'
Avg. embryo expression (LCM): '52.5953'
AT2G21370 XK-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1479 x 10-1 35 11 21 9 76.09% 30.00% 46 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.3702'
Avg. expression score in LCM sample: '23.6783'
Tissue used: 'full endosperm'
AT2G21370 XK-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.33022 x 10-1 19 4 5 17 82.61% 77.27% 23 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.2804'
Avg. expression score in LCM sample: '23.6783'
Tissue used: 'pure endosperm, no chalazal'
AT2G21360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.66667 x 10-1 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'