Displaying data sets 115901 - 116000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G21980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21970 SEP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '433.485'
Avg. embryo expression (LCM): '154.408'
AT2G21970 SEP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21970 SEP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1057.83'
Avg. expression score in LCM sample: '254.715'
Tissue used: 'full endosperm'
AT2G21970 SEP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1171.17'
Avg. expression score in LCM sample: '254.715'
Tissue used: 'pure endosperm, no chalazal'
AT2G21970 SEP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21970 SEP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.5921'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'
AT2G21960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 2 2 100.00% 50.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.813'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'full endosperm'
AT2G21960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '27.6551'
Avg. embryo expression (LCM): '14.8317'
AT2G21960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21950 SKIP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.437 x 10-3 96 10 90.57% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21950 SKIP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.9143 x 10-1 80 23 77.67% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21950 SKIP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.23408 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21950 SKIP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 40 32 12 6 55.56% 33.33% 72 18 TAIR8 Avg. embryo expression (dissected): '240.584'
Avg. embryo expression (LCM): '128.06'
AT2G21950 SKIP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 34 15 21 38 69.39% 64.41% 49 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017715'
Avg. expression score for this sample: '309.57'
Avg. expression score in LCM sample: '124.903'
Tissue used: 'pure endosperm, no chalazal'
AT2G21950 SKIP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.044 x 10-3 74 12 17 62 86.05% 78.48% 86 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017715'
Avg. expression score for this sample: '291.9'
Avg. expression score in LCM sample: '124.903'
Tissue used: 'full endosperm'
AT2G21940 SK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.61177 x 10-1 30 12 11 22 71.43% 66.67% 42 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64514'
Avg. expression score for this sample: '32.0033'
Avg. expression score in LCM sample: '10.7883'
Tissue used: 'full endosperm'
AT2G21940 SK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.49447 x 10-1 13 1 5 4 92.86% 44.44% 14 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64514'
Avg. expression score for this sample: '18.9716'
Avg. expression score in LCM sample: '10.7883'
Tissue used: 'pure endosperm, no chalazal'
AT2G21940 SK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.70141 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21940 SK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 10 8 5 0 55.56% 0.00% 18 5 TAIR8 Avg. embryo expression (dissected): '26.3417'
Avg. embryo expression (LCM): '12.8977'
AT2G21940 SK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-5 51 1 98.08% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21940 SK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0959 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.95 x 10-4 16 24 40.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.695869'
Avg. embryo expression (LCM): '2.53683'
AT2G21930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 PEG 1.6 x 10-8 0 12 16 0 0.00% 0.00% 12 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-07'
Avg. expression score for this sample: '24.9987'
Avg. expression score in LCM sample: '3.95374'
Tissue used: 'full endosperm'
AT2G21930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 PEG 2.86131 x 10-1 2 3 2 0 40.00% 0.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-07'
Avg. expression score for this sample: '8.69339'
Avg. expression score in LCM sample: '3.95374'
Tissue used: 'pure endosperm, no chalazal'
AT2G21930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.217461'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21910 CYP96A5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21910 CYP96A5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21910 CYP96A5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21910 CYP96A5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21910 CYP96A5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21910 CYP96A5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21900 WRKY59 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21900 WRKY59 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.19425'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21900 WRKY59 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.4 0 3 0 0 0.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.423128'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21900 WRKY59 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21900 WRKY59 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21900 WRKY59 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21890 CAD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21890 CAD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21890 CAD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21890 CAD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21890 CAD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.43644'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'full endosperm'
AT2G21890 CAD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.31038'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'pure endosperm, no chalazal'
AT2G21880 RAB7A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.42857 x 10-1 0 0 4 0 0.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166667'
Avg. expression score for this sample: '4.70279'
Avg. expression score in LCM sample: '4.2036'
Tissue used: 'pure endosperm, no chalazal'
AT2G21880 RAB7A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.166667'
Avg. expression score for this sample: '1.31404'
Avg. expression score in LCM sample: '4.2036'
Tissue used: 'full endosperm'
AT2G21880 RAB7A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G21880 RAB7A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21880 RAB7A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66667 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21880 RAB7A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7619 x 10-2 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21870 MGP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.90324 x 10-1 115 36 76.16% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21870 MGP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.19747 x 10-1 21 11 65.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21870 MGP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.19758 x 10-1 83 90 7 17 47.98% 70.83% 173 24 TAIR8 Avg. embryo expression (dissected): '209.017'
Avg. embryo expression (LCM): '333.204'
AT2G21870 MGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.84182 x 10-1 76 19 31 45 80.00% 59.21% 95 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.095589'
Avg. expression score for this sample: '157.278'
Avg. expression score in LCM sample: '116.995'
Tissue used: 'pure endosperm, no chalazal'
AT2G21870 MGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3502 x 10-1 68 18 46 108 79.07% 70.13% 86 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.095589'
Avg. expression score for this sample: '201.602'
Avg. expression score in LCM sample: '116.995'
Tissue used: 'full endosperm'
AT2G21870 MGP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-5 121 15 88.97% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 435 15 96.67% 450 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-22 88 178 33.08% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.51357 x 10-1 334 20 180 72 94.35% 28.57% 354 252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.918584'
Avg. expression score for this sample: '125.377'
Avg. expression score in LCM sample: '53.324'
Tissue used: 'full endosperm'
AT2G21860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 146 18 67 26 89.02% 27.96% 164 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.918584'
Avg. expression score for this sample: '121.973'
Avg. expression score in LCM sample: '53.324'
Tissue used: 'pure endosperm, no chalazal'
AT2G21860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7 x 10-12 13 48 21.31% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.0 794 72 181 33 91.69% 15.42% 866 214 TAIR8 Avg. embryo expression (dissected): '570.811'
Avg. embryo expression (LCM): '297.638'
AT2G21850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 6 0 1 0 100.00% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '3.81625'
Avg. embryo expression (LCM): '.477226'
AT2G21850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.20367 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9287 x 10-1 31 33 10 48 48.44% 82.76% 64 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.918444'
Avg. expression score for this sample: '24.6223'
Avg. expression score in LCM sample: '32.1884'
Tissue used: 'full endosperm'
AT2G21850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 33 12 18 28 73.33% 60.87% 45 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.918444'
Avg. expression score for this sample: '27.986'
Avg. expression score in LCM sample: '32.1884'
Tissue used: 'pure endosperm, no chalazal'
AT2G21850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.58 x 10-4 35 2 94.59% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8089 x 10-1 28 8 77.78% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.55114 x 10-1 127 124 50.60% 251 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.80172 x 10-1 6 2 4 0 75.00% 0.00% 8 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.42031'
Avg. expression score in LCM sample: '3.33643'
Tissue used: 'pure endosperm, no chalazal'
AT2G21840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81659 x 10-1 4 0 3 8 100.00% 72.73% 4 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.87132'
Avg. expression score in LCM sample: '3.33643'
Tissue used: 'full endosperm'
AT2G21840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.219193'
Avg. embryo expression (LCM): '0'
AT2G21840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.15828 x 10-1 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.99894 x 10-1 46 33 58.23% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-6 54 0 100.00% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0008 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.46822 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.40541 x 10-1 24 4 9 0 85.71% 0.00% 28 9 TAIR8 Avg. embryo expression (dissected): '8.31742'
Avg. embryo expression (LCM): '4.37038'
AT2G21830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 5 0 0 2 100.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.28256'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G21830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 27 9 8 3 75.00% 27.27% 36 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.27887'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G21820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1093 x 10-2 75 58 29 39 56.39% 57.35% 133 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074549'
Avg. expression score for this sample: '230.845'
Avg. expression score in LCM sample: '16.2412'
Tissue used: 'full endosperm'
AT2G21820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.79627 x 10-1 39 22 12 24 63.93% 66.67% 61 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074549'
Avg. expression score for this sample: '173.254'
Avg. expression score in LCM sample: '16.2412'
Tissue used: 'pure endosperm, no chalazal'
AT2G21820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.85129 x 10-1 22 12 64.71% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 31 27 8 6 53.45% 42.86% 58 14 TAIR8 Avg. embryo expression (dissected): '230.093'
Avg. embryo expression (LCM): '3.46617'
AT2G21820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4373 x 10-2 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5358 x 10-1 15 13 53.57% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G21810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'