Displaying data sets 11501 - 11600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G50450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.428 x 10-3 16 19 45.71% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.56774 x 10-1 164 83 66.40% 247 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50440 MEMB12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.42737 x 10-1 54 11 83.08% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50440 MEMB12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 8 8 16 61.90% 66.67% 21 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.182921'
Avg. expression score for this sample: '175.855'
Avg. expression score in LCM sample: '85.9093'
Tissue used: 'pure endosperm, no chalazal'
AT5G50440 MEMB12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3987 x 10-2 27 1 10 29 96.43% 74.36% 28 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.182921'
Avg. expression score for this sample: '243.438'
Avg. expression score in LCM sample: '85.9093'
Tissue used: 'full endosperm'
AT5G50440 MEMB12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 12 5 2 1 70.59% 33.33% 17 3 TAIR8 Avg. embryo expression (dissected): '143.49'
Avg. embryo expression (LCM): '94.7545'
AT5G50440 MEMB12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.91974 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50440 MEMB12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.123 x 10-2 42 5 89.36% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50430 UBC33 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.94857 x 10-1 32 11 74.42% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50430 UBC33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.84078 x 10-1 6 0 4 11 100.00% 73.33% 6 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053793'
Avg. expression score for this sample: '80.0789'
Avg. expression score in LCM sample: '18.2842'
Tissue used: 'pure endosperm, no chalazal'
AT5G50430 UBC33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.49043 x 10-1 7 7 5 42 50.00% 89.36% 14 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053793'
Avg. expression score for this sample: '94.6202'
Avg. expression score in LCM sample: '18.2842'
Tissue used: 'full endosperm'
AT5G50430 UBC33 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 5 0 1 28.57% 100.00% 7 1 TAIR8 Avg. embryo expression (dissected): '29.7213'
Avg. embryo expression (LCM): '24.9916'
AT5G50430 UBC33 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.79263 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50430 UBC33 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.30695 x 10-1 54 11 83.08% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50423 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50423 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50423 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50423 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G50423 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50423 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6 x 10-7 117 3 97.50% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.92461 x 10-1 37 7 9 19 84.09% 67.86% 44 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063585'
Avg. expression score for this sample: '30.5266'
Avg. expression score in LCM sample: '14.257'
Tissue used: 'pure endosperm, no chalazal'
AT5G50420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.58668 x 10-1 28 7 9 23 80.00% 71.88% 35 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063585'
Avg. expression score for this sample: '21.9248'
Avg. expression score in LCM sample: '14.257'
Tissue used: 'full endosperm'
AT5G50420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 31 21 14 3 59.62% 17.65% 52 17 TAIR8 Avg. embryo expression (dissected): '36.7022'
Avg. embryo expression (LCM): '22.0277'
AT5G50420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.83923 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.66188 x 10-1 30 4 88.24% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4871 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 3 66.67% 75.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.567'
Avg. expression score in LCM sample: '44.1084'
Tissue used: 'pure endosperm, no chalazal'
AT5G50410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 2 66.67% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '51.783'
Avg. expression score in LCM sample: '44.1084'
Tissue used: 'full endosperm'
AT5G50410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 2 1 50.00% 33.33% 4 3 TAIR8 Avg. embryo expression (dissected): '37.2501'
Avg. embryo expression (LCM): '46.203'
AT5G50410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50400 PAP27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-14 345 0 100.00% 345 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50400 PAP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.48718 x 10-1 35 2 8 1 94.59% 11.11% 37 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001636'
Avg. expression score for this sample: '41.796'
Avg. expression score in LCM sample: '54.1177'
Tissue used: 'pure endosperm, no chalazal'
AT5G50400 PAP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.866 x 10-3 69 0 14 11 100.00% 44.00% 69 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001636'
Avg. expression score for this sample: '54.5736'
Avg. expression score in LCM sample: '54.1177'
Tissue used: 'full endosperm'
AT5G50400 PAP27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0066 16 1 0 0 94.12% 17 0 TAIR8 Avg. embryo expression (dissected): '20.3562'
Avg. embryo expression (LCM): '27.9931'
AT5G50400 PAP27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50400 PAP27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.29473 x 10-1 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50390 EMB3141 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-8 166 18 90.22% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50390 EMB3141 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.60052 x 10-1 111 50 95 157 68.94% 62.30% 161 252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023645'
Avg. expression score for this sample: '234.42'
Avg. expression score in LCM sample: '169.055'
Tissue used: 'pure endosperm, no chalazal'
AT5G50390 EMB3141 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.13 x 10-4 144 47 59 224 75.39% 79.15% 191 283 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023645'
Avg. expression score for this sample: '317.594'
Avg. expression score in LCM sample: '169.055'
Tissue used: 'full endosperm'
AT5G50390 EMB3141 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.4425 x 10-2 149 194 64 53 43.44% 45.30% 343 117 TAIR8 Avg. embryo expression (dissected): '439.394'
Avg. embryo expression (LCM): '312.169'
AT5G50390 EMB3141 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.1 x 10-6 9 21 30.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50390 EMB3141 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.566 x 10-3 121 25 82.88% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50380 EXO70F1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50380 EXO70F1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1072.51'
Avg. expression score in LCM sample: '486.751'
Tissue used: 'pure endosperm, no chalazal'
AT5G50380 EXO70F1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1609.72'
Avg. expression score in LCM sample: '486.751'
Tissue used: 'full endosperm'
AT5G50380 EXO70F1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '758.614'
Avg. embryo expression (LCM): '517.953'
AT5G50380 EXO70F1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50380 EXO70F1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50375 CPI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50375 CPI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '160.129'
Avg. expression score in LCM sample: '88.7754'
Tissue used: 'pure endosperm, no chalazal'
AT5G50375 CPI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '140.054'
Avg. expression score in LCM sample: '88.7754'
Tissue used: 'full endosperm'
AT5G50375 CPI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '267.071'
Avg. embryo expression (LCM): '175.129'
AT5G50375 CPI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50375 CPI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.194 x 10-3 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 20 16 9 27 55.56% 75.00% 36 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.785282'
Avg. expression score for this sample: '215.616'
Avg. expression score in LCM sample: '171.495'
Tissue used: 'pure endosperm, no chalazal'
AT5G50370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.16543 x 10-1 12 7 6 27 63.16% 81.82% 19 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.785282'
Avg. expression score for this sample: '205.986'
Avg. expression score in LCM sample: '171.495'
Tissue used: 'full endosperm'
AT5G50370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4848 x 10-1 37 44 5 3 45.68% 37.50% 81 8 TAIR8 Avg. embryo expression (dissected): '376.424'
Avg. embryo expression (LCM): '467.468'
AT5G50370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.53632 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.88547 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50361 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50361 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50361 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.3444'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50361 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.47371'
Avg. embryo expression (LCM): '0'
AT5G50361 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50361 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 678 13 98.12% 691 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.86 x 10-4 96 27 26 119 78.05% 82.07% 123 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.4e-15'
Avg. expression score for this sample: '851.761'
Avg. expression score in LCM sample: '49.5026'
Tissue used: 'pure endosperm, no chalazal'
AT5G50360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-12 395 93 67 309 80.94% 82.18% 488 376 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.4e-15'
Avg. expression score for this sample: '1740.81'
Avg. expression score in LCM sample: '49.5026'
Tissue used: 'full endosperm'
AT5G50360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.75576 x 10-1 43 29 15 21 59.72% 58.33% 72 36 TAIR8 Avg. embryo expression (dissected): '565.236'
Avg. embryo expression (LCM): '16.2634'
AT5G50360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.4434 x 10-2 169 23 88.02% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-16 416 17 96.07% 433 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.30677 x 10-1 39 23 62.90% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.26508 x 10-1 10 12 12 21 45.45% 63.64% 22 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '78.581'
Avg. expression score in LCM sample: '44.7111'
Tissue used: 'pure endosperm, no chalazal'
AT5G50350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.25399 x 10-1 30 11 12 36 73.17% 75.00% 41 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '61.1322'
Avg. expression score in LCM sample: '44.7111'
Tissue used: 'full endosperm'
AT5G50350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 19 24 9 13 44.19% 59.09% 43 22 TAIR8 Avg. embryo expression (dissected): '121.19'
Avg. embryo expression (LCM): '100.443'
AT5G50350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.51003 x 10-1 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.81551 x 10-1 51 26 66.23% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50345 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.99703'
Avg. expression score in LCM sample: '3.77736'
Tissue used: 'pure endosperm, no chalazal'
AT5G50345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.429636'
Avg. expression score in LCM sample: '3.77736'
Tissue used: 'full endosperm'
AT5G50345 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G50345 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50345 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-22 379 21 94.75% 400 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.30418 x 10-1 137 30 70 56 82.04% 44.44% 167 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061688'
Avg. expression score for this sample: '75.2693'
Avg. expression score in LCM sample: '22.0322'
Tissue used: 'pure endosperm, no chalazal'
AT5G50340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.51 x 10-3 179 22 61 91 89.05% 59.87% 201 152 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061688'
Avg. expression score for this sample: '77.9508'
Avg. expression score in LCM sample: '22.0322'
Tissue used: 'full endosperm'
AT5G50340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.528 x 10-3 189 79 60 19 70.52% 24.05% 268 79 TAIR8 Avg. embryo expression (dissected): '123.831'
Avg. embryo expression (LCM): '83.2006'
AT5G50340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.2071 x 10-2 37 7 84.09% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.48963 x 10-1 153 71 68.30% 224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50335 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G50335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G50335 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G50335 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50335 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9665 x 10-2 32 3 91.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G50330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 3 2 66.67% 40.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.806561'
Avg. expression score for this sample: '8.78427'
Avg. expression score in LCM sample: '1.69026'
Tissue used: 'pure endosperm, no chalazal'