Displaying data sets 115001 - 115100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G23260 UGT84B1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.12683 x 10-1 233 133 63.66% 366 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23260 UGT84B1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.31734 x 10-1 129 85 60.28% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23250 UGT84B2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23250 UGT84B2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23250 UGT84B2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.584532'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23250 UGT84B2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23250 UGT84B2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.518475'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23250 UGT84B2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.565681'
Avg. embryo expression (LCM): '0'
AT2G23240 AtMT4b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '42.5787'
Avg. embryo expression (LCM): '0'
AT2G23240 AtMT4b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23240 AtMT4b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23240 AtMT4b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.213'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23240 AtMT4b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.73614'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23240 AtMT4b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5431 x 10-2 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0 x 10-7 146 34 159 32 81.11% 16.75% 180 191 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-20'
Avg. expression score for this sample: '63.5388'
Avg. expression score in LCM sample: '24.1046'
Tissue used: 'full endosperm'
AT2G23230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.51 x 10-4 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.8 x 10-7 18 26 18 117 40.91% 86.67% 44 135 TAIR8 Avg. embryo expression (dissected): '59.6564'
Avg. embryo expression (LCM): '8.92915'
AT2G23230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.1 x 10-6 0 25 0.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6 x 10-16 62 1 182 21 98.41% 10.34% 63 203 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.2e-20'
Avg. expression score for this sample: '70.3814'
Avg. expression score in LCM sample: '24.1046'
Tissue used: 'pure endosperm, no chalazal'
AT2G23220 CYP81D6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.84973 x 10-1 0 8 0 24 0.00% 100.00% 8 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300701'
Avg. expression score for this sample: '12.7192'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23220 CYP81D6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3844 x 10-2 7 124 7 72 5.34% 91.14% 131 79 TAIR8 Avg. embryo expression (dissected): '162.083'
Avg. embryo expression (LCM): '14.6307'
AT2G23220 CYP81D6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.6072 x 10-2 2 30 1 31 6.25% 96.88% 32 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300701'
Avg. expression score for this sample: '24.097'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23220 CYP81D6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.72523 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23220 CYP81D6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.59684 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23220 CYP81D6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.53346 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.75 x 10-4 17 16 51.52% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.70732 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.688 x 10-3 62 5 2 1 92.54% 33.33% 67 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017203'
Avg. expression score for this sample: '24.1311'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 4 3 3 1 57.14% 25.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.017203'
Avg. expression score for this sample: '7.22673'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Avg. embryo expression (dissected): '5.11998'
Avg. embryo expression (LCM): '.904218'
AT2G23210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.79331 x 10-1 44 14 75.86% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-7 63 3 95.45% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 5 10 16 73.68% 61.54% 19 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.701643'
Avg. expression score for this sample: '69.4378'
Avg. expression score in LCM sample: '17.8727'
Tissue used: 'pure endosperm, no chalazal'
AT2G23200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.22869 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4058 x 10-1 31 21 13 25 59.62% 65.79% 52 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.701643'
Avg. expression score for this sample: '78.1424'
Avg. expression score in LCM sample: '17.8727'
Tissue used: 'full endosperm'
AT2G23200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 10 4 2 58.33% 33.33% 24 6 TAIR8 Avg. embryo expression (dissected): '48.481'
Avg. embryo expression (LCM): '10.9762'
AT2G23200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0556 x 10-1 23 7 76.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23190 CYP81D7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.89267 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23190 CYP81D7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.22 x 10-4 65 26 23 48 71.43% 67.61% 91 71 TAIR8 Avg. embryo expression (dissected): '60.6099'
Avg. embryo expression (LCM): '2.31078'
AT2G23190 CYP81D7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-5 1437 574 71.46% 2011 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23190 CYP81D7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.49 x 10-4 43 5 89.58% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23190 CYP81D7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.94674 x 10-1 1887 1024 1408 2756 64.82% 66.19% 2911 4164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.737871'
Avg. expression score for this sample: '1450.5'
Avg. expression score in LCM sample: '266.165'
Tissue used: 'pure endosperm, no chalazal'
AT2G23190 CYP81D7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2149 x 10-1 3322 1691 1486 3342 66.27% 69.22% 5013 4828 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.737871'
Avg. expression score for this sample: '1522.56'
Avg. expression score in LCM sample: '266.165'
Tissue used: 'full endosperm'
AT2G23180 CYP96A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '9.39242'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23180 CYP96A1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23180 CYP96A1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '2.1843'
Avg. embryo expression (LCM): '3.71734'
AT2G23180 CYP96A1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23180 CYP96A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '4.28251'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23180 CYP96A1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23171 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23171 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23171 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23171 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23171 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23171 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23170 GH3.3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.21956 x 10-1 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23170 GH3.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.12 x 10-3 2 3 32 18 40.00% 36.00% 5 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001087'
Avg. expression score for this sample: '16.126'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23170 GH3.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.78285 x 10-1 12 14 7 11 46.15% 61.11% 26 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001087'
Avg. expression score for this sample: '27.5367'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23170 GH3.3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 182 172 38 30 51.41% 44.12% 354 68 TAIR8 Avg. embryo expression (dissected): '427.707'
Avg. embryo expression (LCM): '192.385'
AT2G23170 GH3.3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1265 46 96.49% 1311 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23170 GH3.3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6 x 10-12 139 25 84.76% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.201267'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23150 NRAMP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '61.4478'
Avg. embryo expression (LCM): '35.5784'
AT2G23150 NRAMP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23150 NRAMP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9612 x 10-2 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23150 NRAMP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.79168 x 10-1 4 4 5 3 50.00% 37.50% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.59591'
Avg. expression score for this sample: '485.433'
Avg. expression score in LCM sample: '429.694'
Tissue used: 'pure endosperm, no chalazal'
AT2G23150 NRAMP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 0 4 4 100.00% 50.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.59591'
Avg. expression score for this sample: '246.246'
Avg. expression score in LCM sample: '429.694'
Tissue used: 'full endosperm'
AT2G23150 NRAMP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23149 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23149 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23149 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23149 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23149 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23149 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23148 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23148 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23148 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23148 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 18 41.94% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23148 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23148 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 45 0 100.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23142 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23142 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23142 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.408416'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23142 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23142 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23142 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23140 PUB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9 x 10-7 114 14 89.06% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23140 PUB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.70977 x 10-1 49 40 37 80 55.06% 68.38% 89 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.775785'
Avg. expression score for this sample: '70.3843'
Avg. expression score in LCM sample: '83.6017'
Tissue used: 'pure endosperm, no chalazal'
AT2G23140 PUB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.99505 x 10-1 30 11 73.17% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23140 PUB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.99575 x 10-1 57 33 34 118 63.33% 77.63% 90 152 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.775785'
Avg. expression score for this sample: '73.8836'
Avg. expression score in LCM sample: '83.6017'
Tissue used: 'full endosperm'
AT2G23140 PUB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.94576 x 10-1 38 51 11 18 42.70% 62.07% 89 29 TAIR8 Avg. embryo expression (dissected): '66.3946'
Avg. embryo expression (LCM): '51.1636'
AT2G23140 PUB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.734 x 10-3 94 23 80.34% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23130 AGP17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23130 AGP17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.8016 x 10-2 27 3 7 1 90.00% 12.50% 30 8 TAIR8 Avg. embryo expression (dissected): '40.8613'
Avg. embryo expression (LCM): '4.62156'