Displaying data sets 114901 - 115000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G23410 CPT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '991.208'
Avg. expression score in LCM sample: '167.027'
Tissue used: 'pure endosperm, no chalazal'
AT2G23410 CPT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23410 CPT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '820.619'
Avg. expression score in LCM sample: '167.027'
Tissue used: 'full endosperm'
AT2G23410 CPT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '38.1802'
Avg. embryo expression (LCM): '2.37357'
AT2G23410 CPT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23410 CPT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.705 x 10-3 1 6 14.29% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9 x 10-13 349 53 86.82% 402 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.508 x 10-3 77 114 78 469 40.31% 85.74% 191 547 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004749'
Avg. expression score for this sample: '698.301'
Avg. expression score in LCM sample: '54.3676'
Tissue used: 'pure endosperm, no chalazal'
AT2G23400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 5 8 6 5 38.46% 45.45% 13 11 TAIR8 Avg. embryo expression (dissected): '45.0396'
Avg. embryo expression (LCM): '0'
AT2G23400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4163 x 10-1 218 532 107 1194 29.07% 91.78% 750 1301 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004749'
Avg. expression score for this sample: '1389.66'
Avg. expression score in LCM sample: '54.3676'
Tissue used: 'full endosperm'
AT2G23390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 6 0.00% 100.00% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '31.3066'
Avg. expression score in LCM sample: '8.4366'
Tissue used: 'full endosperm'
AT2G23390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.15152 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.72527 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '55.4171'
Avg. embryo expression (LCM): '42.5359'
AT2G23390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.0313'
Avg. expression score in LCM sample: '8.4366'
Tissue used: 'pure endosperm, no chalazal'
AT2G23390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23380 CLF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.28582 x 10-1 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23380 CLF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.10619 x 10-1 18 2 4 14 90.00% 77.78% 20 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033983'
Avg. expression score for this sample: '39.7229'
Avg. expression score in LCM sample: '25.0452'
Tissue used: 'pure endosperm, no chalazal'
AT2G23380 CLF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23380 CLF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.68926 x 10-1 40 9 16 40 81.63% 71.43% 49 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033983'
Avg. expression score for this sample: '60.9485'
Avg. expression score in LCM sample: '25.0452'
Tissue used: 'full endosperm'
AT2G23380 CLF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 20 25 6 12 44.44% 66.67% 45 18 TAIR8 Avg. embryo expression (dissected): '90.4649'
Avg. embryo expression (LCM): '132.267'
AT2G23380 CLF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.93 x 10-4 110 8 93.22% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.66667 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '84.9388'
Avg. expression score in LCM sample: '16.006'
Tissue used: 'pure endosperm, no chalazal'
AT2G23370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 4 0 0 0 100.00% 4 0 TAIR8 Avg. embryo expression (dissected): '220.656'
Avg. embryo expression (LCM): '158.326'
AT2G23370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.4 0 0 3 0 0.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '48.3147'
Avg. expression score in LCM sample: '16.006'
Tissue used: 'full endosperm'
AT2G23370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-29 415 28 93.68% 443 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.9 x 10-11 1599 713 588 1898 69.16% 76.35% 2312 2486 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.6e-10'
Avg. expression score for this sample: '425.182'
Avg. expression score in LCM sample: '14.8302'
Tissue used: 'full endosperm'
AT2G23360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-11 343 53 86.62% 396 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-11 522 102 83.65% 624 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.29806 x 10-1 641 684 300 312 48.38% 50.98% 1325 612 TAIR8 Avg. embryo expression (dissected): '333.073'
Avg. embryo expression (LCM): '118.616'
AT2G23360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.59396 x 10-1 389 210 168 399 64.94% 70.37% 599 567 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.6e-10'
Avg. expression score for this sample: '125.33'
Avg. expression score in LCM sample: '14.8302'
Tissue used: 'pure endosperm, no chalazal'
AT2G23350 PAB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 3 5 75.00% 62.50% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '155.304'
Avg. expression score in LCM sample: '161.648'
Tissue used: 'pure endosperm, no chalazal'
AT2G23350 PAB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.62999 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23350 PAB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 12 4 9 16 75.00% 64.00% 16 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '176.127'
Avg. expression score in LCM sample: '161.648'
Tissue used: 'full endosperm'
AT2G23350 PAB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 9 4 3 52.63% 42.86% 19 7 TAIR8 Avg. embryo expression (dissected): '364.112'
Avg. embryo expression (LCM): '521.683'
AT2G23350 PAB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0867 x 10-2 54 11 83.08% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23350 PAB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.17434 x 10-1 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23348 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23348 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23348 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23348 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.9931'
Avg. expression score in LCM sample: '62.5396'
Tissue used: 'pure endosperm, no chalazal'
AT2G23348 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '22.0161'
Avg. embryo expression (LCM): '0'
AT2G23348 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.5832'
Avg. expression score in LCM sample: '62.5396'
Tissue used: 'full endosperm'
AT2G23347 MIR844A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23347 MIR844A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23347 MIR844A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23347 MIR844A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23347 MIR844A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23347 MIR844A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23340 DEAR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.701 x 10-3 75 9 89.29% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23340 DEAR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.58899 x 10-1 73 21 37 57 77.66% 60.64% 94 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034226'
Avg. expression score for this sample: '2290.26'
Avg. expression score in LCM sample: '440.776'
Tissue used: 'pure endosperm, no chalazal'
AT2G23340 DEAR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.76475 x 10-1 32 6 84.21% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23340 DEAR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.059 x 10-2 82 20 24 75 80.39% 75.76% 102 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034226'
Avg. expression score for this sample: '719.903'
Avg. expression score in LCM sample: '440.776'
Tissue used: 'full endosperm'
AT2G23340 DEAR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 6 3 2 53.85% 40.00% 13 5 TAIR8 Avg. embryo expression (dissected): '271.805'
Avg. embryo expression (LCM): '111.696'
AT2G23340 DEAR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-5 50 1 98.04% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23321 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23321 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23321 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23321 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23321 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.48612'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23321 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23320 WRKY15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23320 WRKY15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '61.0023'
Avg. expression score in LCM sample: '11.9053'
Tissue used: 'full endosperm'
AT2G23320 WRKY15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23320 WRKY15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23320 WRKY15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '132.187'
Avg. embryo expression (LCM): '70.2276'
AT2G23320 WRKY15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '88.5984'
Avg. expression score in LCM sample: '11.9053'
Tissue used: 'pure endosperm, no chalazal'
AT2G23310 ATRER1C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.30219 x 10-1 122 36 61 88 77.22% 59.06% 158 149 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014616'
Avg. expression score for this sample: '145.378'
Avg. expression score in LCM sample: '95.8598'
Tissue used: 'pure endosperm, no chalazal'
AT2G23310 ATRER1C1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.67504 x 10-1 36 12 75.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23310 ATRER1C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.627 x 10-3 127 45 69 220 73.84% 76.12% 172 289 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014616'
Avg. expression score for this sample: '179.324'
Avg. expression score in LCM sample: '95.8598'
Tissue used: 'full endosperm'
AT2G23310 ATRER1C1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.44253 x 10-1 66 79 26 25 45.52% 49.02% 145 51 TAIR8 Avg. embryo expression (dissected): '141.474'
Avg. embryo expression (LCM): '81.907'
AT2G23310 ATRER1C1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-6 245 38 86.57% 283 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23310 ATRER1C1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.80952 x 10-1 225 87 72.12% 312 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.97537 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 2 6 33.33% 75.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.577234'
Avg. expression score for this sample: '20.2668'
Avg. expression score in LCM sample: '15.8444'
Tissue used: 'pure endosperm, no chalazal'
AT2G23300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Avg. embryo expression (dissected): '26.9115'
Avg. embryo expression (LCM): '42.2219'
AT2G23300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.72548 x 10-1 4 2 6 4 66.67% 40.00% 6 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.577234'
Avg. expression score for this sample: '29.8859'
Avg. expression score in LCM sample: '15.8444'
Tissue used: 'full endosperm'
AT2G23290 MYB70 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.4 x 10-10 248 72 64 334 77.50% 83.92% 320 398 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.7e-10'
Avg. expression score for this sample: '1214.9'
Avg. expression score in LCM sample: '84.3219'
Tissue used: 'full endosperm'
AT2G23290 MYB70 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.45891 x 10-1 31 12 72.09% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23290 MYB70 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2 x 10-17 568 33 94.51% 601 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23290 MYB70 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.14887 x 10-1 62 57 21 30 52.10% 58.82% 119 51 TAIR8 Avg. embryo expression (dissected): '1395.44'
Avg. embryo expression (LCM): '346.943'
AT2G23290 MYB70 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.85506 x 10-1 83 19 24 40 81.37% 62.50% 102 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.7e-10'
Avg. expression score for this sample: '879.257'
Avg. expression score in LCM sample: '84.3219'
Tissue used: 'pure endosperm, no chalazal'
AT2G23290 MYB70 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6878 x 10-2 262 44 85.62% 306 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.12684'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23260 UGT84B1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.12683 x 10-1 233 133 63.66% 366 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23260 UGT84B1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.1 x 10-8 23 49 31.94% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23260 UGT84B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1598 x 10-2 528 106 356 241 83.28% 40.37% 634 597 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.137982'
Avg. expression score for this sample: '1402.93'
Avg. expression score in LCM sample: '1100.4'
Tissue used: 'pure endosperm, no chalazal'
AT2G23260 UGT84B1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21257 x 10-1 16 4 8 5 80.00% 38.46% 20 13 TAIR8 Avg. embryo expression (dissected): '85.2795'
Avg. embryo expression (LCM): '6.64349'