Displaying data sets 114801 - 114900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G23610 MES3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.49676'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23610 MES3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.02762'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23610 MES3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23610 MES3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23600 ACL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23600 ACL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.62459'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23600 ACL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.67475'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23600 ACL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23600 ACL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23600 ACL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23590 MES8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.08655 x 10-1 5 7 41.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23590 MES8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.12802 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23590 MES8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23590 MES8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 2 2 50.00% 50.00% 6 4 TAIR8 Avg. embryo expression (dissected): '107.821'
Avg. embryo expression (LCM): '0'
AT2G23590 MES8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 1 3 2 90.00% 40.00% 10 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.905035'
Avg. expression score for this sample: '75.5548'
Avg. expression score in LCM sample: '17.6816'
Tissue used: 'pure endosperm, no chalazal'
AT2G23590 MES8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 56 28 19 42 66.67% 68.85% 84 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.905035'
Avg. expression score for this sample: '173.476'
Avg. expression score in LCM sample: '17.6816'
Tissue used: 'full endosperm'
AT2G23580 MES4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 5800 79 84 3529 98.66% 97.68% 5879 3613 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6019.28'
Avg. expression score in LCM sample: '43.1972'
Tissue used: 'full endosperm'
AT2G23580 MES4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 1401 31 74 1617 97.84% 95.62% 1432 1691 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2734.16'
Avg. expression score in LCM sample: '43.1972'
Tissue used: 'pure endosperm, no chalazal'
AT2G23580 MES4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-5 2595 96 96.43% 2691 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23580 MES4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2 x 10-29 111 4 5 91 96.52% 94.79% 115 96 TAIR8 Avg. embryo expression (dissected): '334.138'
Avg. embryo expression (LCM): '0'
AT2G23580 MES4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-24 8183 41 99.50% 8224 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23580 MES4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1986 x 10-2 12796 236 98.19% 13032 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23570 MES19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 477 0 100.00% 477 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23570 MES19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '5.24251'
Avg. embryo expression (LCM): '0'
AT2G23570 MES19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 27 0 100.00% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23570 MES19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3 x 10-17 58 0 0 84 100.00% 100.00% 58 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.1e-21'
Avg. expression score for this sample: '71.6132'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23570 MES19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.57 x 10-4 14 0 0 21 100.00% 100.00% 14 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.1e-21'
Avg. expression score for this sample: '28.7842'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23570 MES19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 350 0 100.00% 350 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23560 MES7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23560 MES7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23560 MES7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '49.2107'
Avg. expression score in LCM sample: '3.13066'
Tissue used: 'pure endosperm, no chalazal'
AT2G23560 MES7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '52.9906'
Avg. expression score in LCM sample: '3.13066'
Tissue used: 'full endosperm'
AT2G23560 MES7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.0912'
Avg. embryo expression (LCM): '5.3374'
AT2G23560 MES7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23550 MES6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23550 MES6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '188.985'
Avg. embryo expression (LCM): '2.43636'
AT2G23550 MES6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1207.04'
Avg. expression score in LCM sample: '5.70279'
Tissue used: 'pure endosperm, no chalazal'
AT2G23550 MES6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '945.854'
Avg. expression score in LCM sample: '5.70279'
Tissue used: 'full endosperm'
AT2G23550 MES6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23550 MES6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '145.825'
Avg. expression score in LCM sample: '1.08765'
Tissue used: 'full endosperm'
AT2G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.08615'
Avg. expression score in LCM sample: '1.08765'
Tissue used: 'pure endosperm, no chalazal'
AT2G23540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.19306'
Avg. embryo expression (LCM): '0'
AT2G23540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2384 x 10-2 29 15 65.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.57728 x 10-1 50 66 43.10% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.54601 x 10-1 55 29 10 5 65.48% 33.33% 84 15 TAIR8 Avg. embryo expression (dissected): '58.3333'
Avg. embryo expression (LCM): '92.3181'
AT2G23530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.97869 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.75 x 10-3 3 4 24 12 42.86% 33.33% 7 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023033'
Avg. expression score for this sample: '12.9095'
Avg. expression score in LCM sample: '29.1607'
Tissue used: 'full endosperm'
AT2G23530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 1 7 1 93.75% 12.50% 16 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023033'
Avg. expression score for this sample: '12.4956'
Avg. expression score in LCM sample: '29.1607'
Tissue used: 'pure endosperm, no chalazal'
AT2G23520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.02199 x 10-1 45 27 22 42 62.50% 65.62% 72 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000339'
Avg. expression score for this sample: '55.8166'
Avg. expression score in LCM sample: '28.8814'
Tissue used: 'pure endosperm, no chalazal'
AT2G23520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1 x 10-6 188 37 57 182 83.56% 76.15% 225 239 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000339'
Avg. expression score for this sample: '135.825'
Avg. expression score in LCM sample: '28.8814'
Tissue used: 'full endosperm'
AT2G23520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.02548 x 10-1 93 69 22 25 57.41% 53.19% 162 47 TAIR8 Avg. embryo expression (dissected): '125.722'
Avg. embryo expression (LCM): '106.786'
AT2G23520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.23192 x 10-1 31 5 86.11% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-14 259 11 95.93% 270 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.24 x 10-4 87 8 91.58% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23510 SDT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.89052 x 10-1 19 16 54.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23510 SDT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4 x 10-20 1193 378 75.94% 1571 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23510 SDT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.23585 x 10-1 546 435 298 233 55.66% 43.88% 981 531 TAIR8 Avg. embryo expression (dissected): '649.346'
Avg. embryo expression (LCM): '231.128'
AT2G23510 SDT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54765 x 10-1 626 374 293 639 62.60% 68.56% 1000 932 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000395'
Avg. expression score for this sample: '485.192'
Avg. expression score in LCM sample: '63.01'
Tissue used: 'pure endosperm, no chalazal'
AT2G23510 SDT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.17 x 10-4 2352 1510 908 1891 60.90% 67.56% 3862 2799 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000395'
Avg. expression score for this sample: '1330.31'
Avg. expression score in LCM sample: '63.01'
Tissue used: 'full endosperm'
AT2G23510 SDT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.23914 x 10-1 98 70 58.33% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23470 RUS4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.62036 x 10-1 60 8 88.24% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23470 RUS4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.70384 x 10-1 40 6 86.96% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23470 RUS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.49018 x 10-1 40 2 20 35 95.24% 63.64% 42 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027874'
Avg. expression score for this sample: '10.8918'
Avg. expression score in LCM sample: '1.64617'
Tissue used: 'full endosperm'
AT2G23470 RUS4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.32391 x 10-1 16 0 2 4 100.00% 66.67% 16 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027874'
Avg. expression score for this sample: '3.89022'
Avg. expression score in LCM sample: '1.64617'
Tissue used: 'pure endosperm, no chalazal'
AT2G23470 RUS4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.15046 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23470 RUS4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 7 8 2 66.67% 20.00% 21 10 TAIR8 Avg. embryo expression (dissected): '8.38988'
Avg. embryo expression (LCM): '10.5366'
AT2G23460 XLG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.29376 x 10-1 296 440 93 181 40.22% 66.06% 736 274 TAIR8 Avg. embryo expression (dissected): '228.164'
Avg. embryo expression (LCM): '239.844'
AT2G23460 XLG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.1 x 10-9 347 56 86.10% 403 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23460 XLG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1616 455 524 1880 78.03% 78.20% 2071 2404 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.2e-22'
Avg. expression score for this sample: '451.136'
Avg. expression score in LCM sample: '335.965'
Tissue used: 'full endosperm'
AT2G23460 XLG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.92789 x 10-1 1067 468 640 1274 69.51% 66.56% 1535 1914 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.2e-22'
Avg. expression score for this sample: '488.5'
Avg. expression score in LCM sample: '335.965'
Tissue used: 'pure endosperm, no chalazal'
AT2G23460 XLG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2400 220 91.60% 2620 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23460 XLG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-23 1040 166 86.24% 1206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7 x 10-22 391 16 96.07% 407 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8222 x 10-2 197 77 117 277 71.90% 70.30% 274 394 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-10'
Avg. expression score for this sample: '227.63'
Avg. expression score in LCM sample: '82.617'
Tissue used: 'pure endosperm, no chalazal'
AT2G23450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4 x 10-13 223 68 66 407 76.63% 86.05% 291 473 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-10'
Avg. expression score for this sample: '249.635'
Avg. expression score in LCM sample: '82.617'
Tissue used: 'full endosperm'
AT2G23450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.9336 x 10-1 70 109 36 58 39.11% 61.70% 179 94 TAIR8 Avg. embryo expression (dissected): '143.792'
Avg. embryo expression (LCM): '40.5642'
AT2G23450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.623 x 10-3 95 12 88.79% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-30 516 18 96.63% 534 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G23440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G23440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G23430 ICK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.344 x 10-3 71 19 40 131 78.89% 76.61% 90 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010481'
Avg. expression score for this sample: '605.079'
Avg. expression score in LCM sample: '133.619'
Tissue used: 'full endosperm'
AT2G23430 ICK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.36749 x 10-1 14 8 8 25 63.64% 75.76% 22 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010481'
Avg. expression score for this sample: '297.241'
Avg. expression score in LCM sample: '133.619'
Tissue used: 'pure endosperm, no chalazal'
AT2G23430 ICK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.69284 x 10-1 18 2 90.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23430 ICK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '34.3492'
Avg. embryo expression (LCM): '14.6056'
AT2G23430 ICK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-5 42 0 100.00% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23430 ICK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.67 x 10-4 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23420 NAPRT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23420 NAPRT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.4669'
Avg. embryo expression (LCM): '15.2461'
AT2G23420 NAPRT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G23420 NAPRT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.4099'
Avg. expression score in LCM sample: '7.84869'
Tissue used: 'full endosperm'
AT2G23420 NAPRT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.26908'
Avg. expression score in LCM sample: '7.84869'
Tissue used: 'pure endosperm, no chalazal'
AT2G23420 NAPRT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'