| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.34 x 10-4 | 39 | 0 | 100.00% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.22 x 10-3 | 27 | 0 | 100.00% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24285 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24285 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24285 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G24285 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.70714' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24285 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G24285 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.47575' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G24280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 3 | 6 | 100.00% | 66.67% | 4 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.685082' Avg. expression score for this sample: '43.0181' Avg. expression score in LCM sample: '4.87971' Tissue used: 'full endosperm' |
|||||
| AT2G24280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24280 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 8 | 7 | 3 | 2 | 53.33% | 40.00% | 15 | 5 | TAIR8 |
Avg. embryo expression (dissected): '121.943' Avg. embryo expression (LCM): '72.5007' |
||||
| AT2G24280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.685082' Avg. expression score for this sample: '16.7859' Avg. expression score in LCM sample: '4.87971' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G24280 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1174 x 10-2 | 52 | 0 | 100.00% | 52 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.25692 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24270 | ALDH11A3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24270 | ALDH11A3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-5 | 38 | 3 | 92.68% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24270 | ALDH11A3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.36889 x 10-1 | 24 | 12 | 7 | 9 | 66.67% | 56.25% | 36 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.140631' Avg. expression score for this sample: '209.34' Avg. expression score in LCM sample: '126.858' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G24270 | ALDH11A3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.1462 | 63 | 27 | 44 | 37 | 70.00% | 45.68% | 90 | 81 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.140631' Avg. expression score for this sample: '328.696' Avg. expression score in LCM sample: '126.858' Tissue used: 'full endosperm' |
||||
| AT2G24270 | ALDH11A3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.00334 x 10-1 | 93 | 81 | 19 | 22 | 53.45% | 53.66% | 174 | 41 | TAIR8 |
Avg. embryo expression (dissected): '930.8' Avg. embryo expression (LCM): '816.282' |
|||
| AT2G24270 | ALDH11A3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.41198 x 10-1 | 5 | 7 | 41.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24260 | LRL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0907 x 10-1 | 25 | 3 | 89.29% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24260 | LRL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.21247 x 10-1 | 38 | 21 | 21 | 77 | 64.41% | 78.57% | 59 | 98 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018173' Avg. expression score for this sample: '191.404' Avg. expression score in LCM sample: '102.591' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24260 | LRL1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '17.2481' Avg. embryo expression (LCM): '9.83337' |
|||
| AT2G24260 | LRL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.1404 x 10-2 | 63 | 39 | 18 | 112 | 61.76% | 86.15% | 102 | 130 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018173' Avg. expression score for this sample: '116.052' Avg. expression score in LCM sample: '102.591' Tissue used: 'full endosperm' |
||||
| AT2G24260 | LRL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.3 x 10-5 | 37 | 0 | 100.00% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24260 | LRL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.1972 x 10-2 | 21 | 1 | 95.45% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24255 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 9 | 35.71% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24255 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24255 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.46514' Avg. expression score in LCM sample: '3.89495' Tissue used: 'full endosperm' |
||||||
| AT2G24255 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G24255 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G24255 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.39949' Avg. expression score in LCM sample: '3.89495' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G24250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 0 | 3 | 50.00% | 100.00% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '13.3986' Avg. expression score in LCM sample: '23.1492' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.66128 x 10-1 | 5 | 10 | 0 | 9 | 33.33% | 100.00% | 15 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '33.6219' Avg. expression score in LCM sample: '23.1492' Tissue used: 'full endosperm' |
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| AT2G24250 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 6 | 2 | 4 | 25.00% | 66.67% | 8 | 6 | TAIR8 |
Avg. embryo expression (dissected): '31.3184' Avg. embryo expression (LCM): '44.2815' |
||||
| AT2G24250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24250 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.2416 x 10-2 | 23 | 3 | 88.46% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.09946 x 10-1 | 18 | 3 | 85.71% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24240 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24240 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24240 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G24240 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '91.5731' Avg. expression score in LCM sample: '9.62713' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24240 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '46.633' Avg. embryo expression (LCM): '20.1816' |
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| AT2G24240 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '328.962' Avg. expression score in LCM sample: '9.62713' Tissue used: 'full endosperm' |
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| AT2G24230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 3 | 4 | 4 | 66.67% | 50.00% | 9 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.751317' Avg. expression score for this sample: '33.4697' Avg. expression score in LCM sample: '7.36366' Tissue used: 'full endosperm' |
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| AT2G24230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.76087 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24230 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | TAIR8 |
Avg. embryo expression (dissected): '30.98' Avg. embryo expression (LCM): '41.5187' |
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| AT2G24230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 1 | 0 | 66.67% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.751317' Avg. expression score for this sample: '16.2115' Avg. expression score in LCM sample: '7.36366' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24230 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.16905 x 10-1 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.60079 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24220 | PUP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24220 | PUP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24220 | PUP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.576471' Avg. expression score for this sample: '40.2134' Avg. expression score in LCM sample: '12.8754' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24220 | PUP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.76471 x 10-1 | 3 | 1 | 0 | 5 | 75.00% | 100.00% | 4 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.576471' Avg. expression score for this sample: '96.7168' Avg. expression score in LCM sample: '12.8754' Tissue used: 'full endosperm' |
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| AT2G24220 | PUP5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '76.7128' Avg. embryo expression (LCM): '43.0006' |
||||
| AT2G24220 | PUP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24210 | TPS10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24210 | TPS10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.270194' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24210 | TPS10 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT2G24210 | TPS10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G24210 | TPS10 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24210 | TPS10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24205 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G24205 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G24205 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G24205 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G24205 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G24205 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24200 | LAP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1869.48' Avg. expression score in LCM sample: '548.908' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24200 | LAP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '3594.53' Avg. expression score in LCM sample: '548.908' Tissue used: 'full endosperm' |
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| AT2G24200 | LAP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1836.83' Avg. embryo expression (LCM): '856.721' |
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| AT2G24200 | LAP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24200 | LAP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24200 | LAP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24190 | SDR2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.96 x 10-4 | 32 | 0 | 100.00% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24190 | SDR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.3 x 10-9 | 133 | 4 | 97.08% | 137 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24190 | SDR2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24190 | SDR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.32391 x 10-1 | 13 | 1 | 1 | 7 | 92.86% | 87.50% | 14 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.135601' Avg. expression score for this sample: '8.66862' Avg. expression score in LCM sample: '1.36691' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24190 | SDR2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.7337 x 10-1 | 10 | 2 | 2 | 1 | 83.33% | 33.33% | 12 | 3 | TAIR8 |
Avg. embryo expression (dissected): '7.50675' Avg. embryo expression (LCM): '5.86486' |
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| AT2G24190 | SDR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.35492 x 10-1 | 63 | 9 | 36 | 52 | 87.50% | 59.09% | 72 | 88 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.135601' Avg. expression score for this sample: '37.0752' Avg. expression score in LCM sample: '1.36691' Tissue used: 'full endosperm' |
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| AT2G24180 | CYP71B6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.036 x 10-3 | 29 | 3 | 7 | 40 | 90.62% | 85.11% | 32 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.035204' Avg. expression score for this sample: '39.2067' Avg. expression score in LCM sample: '16.4323' Tissue used: 'full endosperm' |
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| AT2G24180 | CYP71B6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.172 x 10-3 | 28 | 0 | 100.00% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24180 | CYP71B6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.35052 x 10-1 | 11 | 1 | 2 | 1 | 91.67% | 33.33% | 12 | 3 | TAIR8 |
Avg. embryo expression (dissected): '30.3596' Avg. embryo expression (LCM): '40.6521' |
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| AT2G24180 | CYP71B6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.47527 x 10-1 | 7 | 1 | 8 | 4 | 87.50% | 33.33% | 8 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.035204' Avg. expression score for this sample: '23.5324' Avg. expression score in LCM sample: '16.4323' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24180 | CYP71B6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.8173 x 10-2 | 47 | 3 | 94.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24180 | CYP71B6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 17 | 3 | 85.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.7771 x 10-2 | 41 | 5 | 89.13% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.81 x 10-4 | 62 | 4 | 93.94% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.68813 x 10-1 | 8 | 5 | 5 | 7 | 61.54% | 58.33% | 13 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.169456' Avg. expression score for this sample: '151.271' Avg. expression score in LCM sample: '96.4918' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.4454 x 10-2 | 31 | 8 | 14 | 50 | 79.49% | 78.12% | 39 | 64 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.169456' Avg. expression score for this sample: '398.357' Avg. expression score in LCM sample: '96.4918' Tissue used: 'full endosperm' |
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| AT2G24170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 1 | 2 | 2 | 0 | 33.33% | 0.00% | 3 | 2 | TAIR8 |
Avg. embryo expression (dissected): '71.4417' Avg. embryo expression (LCM): '24.3888' |
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| AT2G24170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 5 | 73.68% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24150 | HHP3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-5 | 118 | 17 | 87.41% | 135 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24150 | HHP3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.54439 x 10-1 | 289 | 188 | 109 | 236 | 60.59% | 68.41% | 477 | 345 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001586' Avg. expression score for this sample: '237.261' Avg. expression score in LCM sample: '77.1053' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G24150 | HHP3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.00205 x 10-1 | 460 | 496 | 189 | 204 | 48.12% | 51.91% | 956 | 393 | TAIR8 |
Avg. embryo expression (dissected): '541.411' Avg. embryo expression (LCM): '331.446' |
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| AT2G24150 | HHP3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7 x 10-7 | 304 | 168 | 185 | 767 | 64.41% | 80.57% | 472 | 952 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001586' Avg. expression score for this sample: '271.221' Avg. expression score in LCM sample: '77.1053' Tissue used: 'full endosperm' |
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| AT2G24150 | HHP3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-16 | 778 | 142 | 84.57% | 920 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24150 | HHP3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.8 x 10-12 | 597 | 418 | 58.82% | 1015 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G24140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.9402 x 10-2 | 2 | 5 | 28.57% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G24140 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.036 x 10-3 | 33 | 3 | 91.67% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |