Displaying data sets 113401 - 113500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G25780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G25780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G25780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G25770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.9114'
Avg. expression score in LCM sample: '11.9053'
Tissue used: 'pure endosperm, no chalazal'
AT2G25770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.3403'
Avg. expression score in LCM sample: '11.9053'
Tissue used: 'full endosperm'
AT2G25770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '26.6726'
Avg. embryo expression (LCM): '16.9541'
AT2G25770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.58702 x 10-1 46 25 64.79% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 9 6 1 62.50% 14.29% 24 7 TAIR8 Avg. embryo expression (dissected): '612.463'
Avg. embryo expression (LCM): '288.734'
AT2G25760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.14861 x 10-1 19 3 10 19 86.36% 65.52% 22 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.400811'
Avg. expression score for this sample: '866.352'
Avg. expression score in LCM sample: '317.475'
Tissue used: 'pure endosperm, no chalazal'
AT2G25760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.78689 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1431 x 10-1 30 6 14 20 83.33% 58.82% 36 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.400811'
Avg. expression score for this sample: '408.112'
Avg. expression score in LCM sample: '317.475'
Tissue used: 'full endosperm'
AT2G25760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.13 x 10-4 84 7 92.31% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.083 x 10-3 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.298 x 10-3 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.49482 x 10-1 4 2 6 2 66.67% 25.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.068994'
Avg. expression score for this sample: '62.9607'
Avg. expression score in LCM sample: '45.5635'
Tissue used: 'full endosperm'
AT2G25740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 2 1 100.00% 33.33% 3 3 TAIR8 Avg. embryo expression (dissected): '53.9114'
Avg. embryo expression (LCM): '26.373'
AT2G25740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.91304 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.14685 x 10-1 1 3 3 1 25.00% 25.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.068994'
Avg. expression score for this sample: '41.1033'
Avg. expression score in LCM sample: '45.5635'
Tissue used: 'pure endosperm, no chalazal'
AT2G25737 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.92226 x 10-1 171 48 121 183 78.08% 60.20% 219 304 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007617'
Avg. expression score for this sample: '178.736'
Avg. expression score in LCM sample: '93.8168'
Tissue used: 'pure endosperm, no chalazal'
AT2G25737 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.764 x 10-3 591 135 394 708 81.40% 64.25% 726 1102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007617'
Avg. expression score for this sample: '228.55'
Avg. expression score in LCM sample: '93.8168'
Tissue used: 'full endosperm'
AT2G25737 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.62506 x 10-1 92 30 75.41% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25737 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.61934 x 10-1 197 141 71 51 58.28% 41.80% 338 122 TAIR8 Avg. embryo expression (dissected): '262.034'
Avg. embryo expression (LCM): '98.1955'
AT2G25737 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1431 150 90.51% 1581 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25737 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.72998 x 10-1 890 363 71.03% 1253 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25735 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25735 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G25735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.10635'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G25735 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.239098'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G25735 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9 x 10-8 151 17 89.88% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.20888 x 10-1 76 48 61.29% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.50044 x 10-1 111 24 48 73 82.22% 60.33% 135 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525091'
Avg. expression score for this sample: '175.987'
Avg. expression score in LCM sample: '74.6948'
Tissue used: 'full endosperm'
AT2G25730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 22 9 8 48.84% 47.06% 43 17 TAIR8 Avg. embryo expression (dissected): '120.892'
Avg. embryo expression (LCM): '78.9307'
AT2G25730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2529 x 10-2 24 2 92.31% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69199 x 10-1 37 8 32 31 82.22% 49.21% 45 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.525091'
Avg. expression score for this sample: '101.985'
Avg. expression score in LCM sample: '74.6948'
Tissue used: 'pure endosperm, no chalazal'
AT2G25720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '215.898'
Avg. expression score in LCM sample: '44.1231'
Tissue used: 'pure endosperm, no chalazal'
AT2G25720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '218.09'
Avg. expression score in LCM sample: '44.1231'
Tissue used: 'full endosperm'
AT2G25720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '206.217'
Avg. embryo expression (LCM): '139.011'
AT2G25720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25710 HCS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.18576 x 10-1 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25710 HCS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '89.8115'
Avg. embryo expression (LCM): '79.3953'
AT2G25710 HCS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715987'
Avg. expression score for this sample: '48.1594'
Avg. expression score in LCM sample: '25.9859'
Tissue used: 'pure endosperm, no chalazal'
AT2G25710 HCS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25710 HCS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 3 3 3 62.50% 50.00% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715987'
Avg. expression score for this sample: '48.1667'
Avg. expression score in LCM sample: '25.9859'
Tissue used: 'full endosperm'
AT2G25710 HCS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.96732 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25700 SK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 25 46.81% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25700 SK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 44 30 59.46% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25700 SK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.82654'
Avg. expression score in LCM sample: '54.2206'
Tissue used: 'full endosperm'
AT2G25700 SK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.43059'
Avg. embryo expression (LCM): '0'
AT2G25700 SK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25700 SK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.22'
Avg. expression score in LCM sample: '54.2206'
Tissue used: 'pure endosperm, no chalazal'
AT2G25697 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G25697 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G25697 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25697 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G25697 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25697 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0925 x 10-2 96 4 96.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 13 10 1 1 56.52% 50.00% 23 2 TAIR8 Avg. embryo expression (dissected): '34.1463'
Avg. embryo expression (LCM): '32.2002'
AT2G25690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.781 x 10-2 17 2 2 9 89.47% 81.82% 19 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000032'
Avg. expression score for this sample: '25.0531'
Avg. expression score in LCM sample: '5.10018'
Tissue used: 'pure endosperm, no chalazal'
AT2G25690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4089 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.03 x 10-4 45 9 10 71 83.33% 87.65% 54 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000032'
Avg. expression score for this sample: '67.9344'
Avg. expression score in LCM sample: '5.10018'
Tissue used: 'full endosperm'
AT2G25690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.7 x 10-4 90 1 98.90% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25685 SCRL17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 30 30 50.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25685 SCRL17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 198 47 80.82% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25685 SCRL17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'full endosperm'
AT2G25685 SCRL17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G25685 SCRL17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25685 SCRL17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.11214'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'pure endosperm, no chalazal'
AT2G25680 MOT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.76056 x 10-1 41 28 20 76 59.42% 79.17% 69 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.703757'
Avg. expression score for this sample: '144.423'
Avg. expression score in LCM sample: '47.342'
Tissue used: 'pure endosperm, no chalazal'
AT2G25680 MOT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.33666 x 10-1 43 45 41 91 48.86% 68.94% 88 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.703757'
Avg. expression score for this sample: '102.55'
Avg. expression score in LCM sample: '47.342'
Tissue used: 'full endosperm'
AT2G25680 MOT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.83239 x 10-1 17 11 60.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25680 MOT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.59459 x 10-1 66 59 41 26 52.80% 38.81% 125 67 TAIR8 Avg. embryo expression (dissected): '264.596'
Avg. embryo expression (LCM): '124.744'
AT2G25680 MOT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-15 89 0 100.00% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25680 MOT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.10451 x 10-1 14 8 63.64% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.44851 x 10-1 7 1 2 2 87.50% 50.00% 8 4 TAIR8 Avg. embryo expression (dissected): '2090.64'
Avg. embryo expression (LCM): '1378.77'
AT2G25670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 5 1 0 2 83.33% 100.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.33728'
Avg. expression score for this sample: '1373.66'
Avg. expression score in LCM sample: '227.524'
Tissue used: 'pure endosperm, no chalazal'
AT2G25670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.78322 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.77684 x 10-1 24 5 10 16 82.76% 61.54% 29 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.33728'
Avg. expression score for this sample: '1695.19'
Avg. expression score in LCM sample: '227.524'
Tissue used: 'full endosperm'
AT2G25670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.06 x 10-4 60 1 98.36% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25660 emb2410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-5 134 12 91.78% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25660 emb2410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2 x 10-5 83 5 94.32% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25660 emb2410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8439 x 10-2 61 16 19 68 79.22% 78.16% 77 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063171'
Avg. expression score for this sample: '131.073'
Avg. expression score in LCM sample: '49.7965'
Tissue used: 'full endosperm'
AT2G25660 emb2410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.86193 x 10-1 17 27 9 4 38.64% 30.77% 44 13 TAIR8 Avg. embryo expression (dissected): '118.67'
Avg. embryo expression (LCM): '85.0969'
AT2G25660 emb2410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.74346 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25660 emb2410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.14947 x 10-1 18 8 7 7 69.23% 50.00% 26 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063171'
Avg. expression score for this sample: '76.5374'
Avg. expression score in LCM sample: '49.7965'
Tissue used: 'pure endosperm, no chalazal'
AT2G25650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.163 x 10-3 24666 6813 13019 13513 78.36% 50.93% 31479 26532 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000039'
Avg. expression score for this sample: '8447.53'
Avg. expression score in LCM sample: '1022.59'
Tissue used: 'pure endosperm, no chalazal'
AT2G25650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4 x 10-23 21386 3775 9557 9386 85.00% 49.55% 25161 18943 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000039'
Avg. expression score for this sample: '4959.69'
Avg. expression score in LCM sample: '1022.59'
Tissue used: 'full endosperm'
AT2G25650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 1707 1550 52.41% 3257 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G25650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.0 14356 7075 5104 2371 66.99% 31.72% 21431 7475 TAIR8 Avg. embryo expression (dissected): '6966.27'
Avg. embryo expression (LCM): '2305.65'