Displaying data sets 112901 - 113000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G26580 YAB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.75397'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26580 YAB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26570 WEB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26570 WEB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '110.309'
Avg. expression score in LCM sample: '17.0937'
Tissue used: 'pure endosperm, no chalazal'
AT2G26570 WEB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '230.567'
Avg. embryo expression (LCM): '79.8349'
AT2G26570 WEB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '163.669'
Avg. expression score in LCM sample: '17.0937'
Tissue used: 'full endosperm'
AT2G26570 WEB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26570 WEB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26560 PLA2A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26560 PLA2A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26560 PLA2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26560 PLA2A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26560 PLA2A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.198987'
Avg. embryo expression (LCM): '0'
AT2G26560 PLA2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.17855'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G26550 HO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 8 3 9 52.94% 75.00% 17 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.840482'
Avg. expression score for this sample: '34.5715'
Avg. expression score in LCM sample: '18.049'
Tissue used: 'pure endosperm, no chalazal'
AT2G26550 HO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.83247 x 10-1 33 26 0 1 55.93% 100.00% 59 1 TAIR8 Avg. embryo expression (dissected): '75.2995'
Avg. embryo expression (LCM): '48.6268'
AT2G26550 HO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 7 14 50.00% 66.67% 4 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.840482'
Avg. expression score for this sample: '35.9462'
Avg. expression score in LCM sample: '18.049'
Tissue used: 'full endosperm'
AT2G26550 HO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26550 HO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.116 x 10-3 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26550 HO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.12199 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26547 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26547 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.50832'
Avg. embryo expression (LCM): '10.8255'
AT2G26547 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.2628'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G26547 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26547 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26547 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26540 HEMD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1012 x 10-2 15 8 32 28 65.22% 46.67% 23 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.123354'
Avg. expression score for this sample: '51.1177'
Avg. expression score in LCM sample: '4.2183'
Tissue used: 'full endosperm'
AT2G26540 HEMD endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.11311 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26540 HEMD endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26540 HEMD endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.526 x 10-3 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26540 HEMD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 6 2 10 50.00% 83.33% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.123354'
Avg. expression score for this sample: '24.2753'
Avg. expression score in LCM sample: '4.2183'
Tissue used: 'pure endosperm, no chalazal'
AT2G26540 HEMD embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 13 4 8 35.00% 66.67% 20 12 TAIR8 Avg. embryo expression (dissected): '59.0465'
Avg. embryo expression (LCM): '50.4478'
AT2G26530 AR781 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.3977'
Avg. embryo expression (LCM): '0'
AT2G26530 AR781 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G26530 AR781 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26530 AR781 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26530 AR781 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.584211'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26530 AR781 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6891 x 10-2 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.53647 x 10-1 8 7 7 3 53.33% 30.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000196'
Avg. expression score for this sample: '32.7039'
Avg. expression score in LCM sample: '36.9506'
Tissue used: 'pure endosperm, no chalazal'
AT2G26520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.268 x 10-3 82 23 25 16 78.10% 39.02% 105 41 TAIR8 Avg. embryo expression (dissected): '532.717'
Avg. embryo expression (LCM): '253.922'
AT2G26520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.48 x 10-4 1 3 18 1 25.00% 5.26% 4 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000196'
Avg. expression score for this sample: '14.8084'
Avg. expression score in LCM sample: '36.9506'
Tissue used: 'full endosperm'
AT2G26520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-10 54 8 87.10% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26511 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26511 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26511 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26511 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26511 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G26511 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G26510 PDE135 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.42857 x 10-1 0 4 0 0 0.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.129208'
Avg. expression score for this sample: '3.45004'
Avg. expression score in LCM sample: '.734896'
Tissue used: 'pure endosperm, no chalazal'
AT2G26510 PDE135 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 7 4 3 53.33% 42.86% 15 7 TAIR8 Avg. embryo expression (dissected): '51.0938'
Avg. embryo expression (LCM): '40.514'
AT2G26510 PDE135 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26510 PDE135 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.99275 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26510 PDE135 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.99792 x 10-1 3 5 4 6 37.50% 60.00% 8 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.129208'
Avg. expression score for this sample: '5.45897'
Avg. expression score in LCM sample: '.734896'
Tissue used: 'full endosperm'
AT2G26510 PDE135 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.64734 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '188.939'
Avg. embryo expression (LCM): '72.0486'
AT2G26500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '116.888'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'full endosperm'
AT2G26500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '133.732'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'pure endosperm, no chalazal'
AT2G26500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.69007'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G26490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.927636'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.77141'
Avg. embryo expression (LCM): '.740956'
AT2G26480 UGT76D1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.197632'
Avg. embryo expression (LCM): '0'
AT2G26480 UGT76D1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26480 UGT76D1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 4.54545 x 10-1 0 0 0 6 100.00% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '3.08119'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G26480 UGT76D1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26480 UGT76D1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.177335'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G26480 UGT76D1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 47 19 71.21% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02595 x 10-1 34 55 11 27 38.20% 71.05% 89 38 TAIR8 Avg. embryo expression (dissected): '47.1524'
Avg. embryo expression (LCM): '40.1623'
AT2G26470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.01181 x 10-1 37 30 13 60 55.22% 82.19% 67 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.222035'
Avg. expression score for this sample: '41.9227'
Avg. expression score in LCM sample: '8.39251'
Tissue used: 'pure endosperm, no chalazal'
AT2G26470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3715 x 10-2 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.34 x 10-4 100 17 85.47% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24916 x 10-1 96 57 32 126 62.75% 79.75% 153 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.222035'
Avg. expression score for this sample: '58.5828'
Avg. expression score in LCM sample: '8.39251'
Tissue used: 'full endosperm'
AT2G26460 SMU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 45 20 41 79 69.23% 65.83% 65 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '161.252'
Avg. expression score in LCM sample: '81.7351'
Tissue used: 'full endosperm'
AT2G26460 SMU2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3631 x 10-2 123 36 77.36% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26460 SMU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 25 9 13 21 73.53% 61.76% 34 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '186.161'
Avg. expression score in LCM sample: '81.7351'
Tissue used: 'pure endosperm, no chalazal'
AT2G26460 SMU2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.363 x 10-3 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26460 SMU2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17525 x 10-1 85 52 62.04% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26460 SMU2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0759 x 10-2 26 9 4 4 74.29% 50.00% 35 8 TAIR8 Avg. embryo expression (dissected): '210.172'
Avg. embryo expression (LCM): '190.602'
AT2G26450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.30607 x 10-1 43 33 11 15 56.58% 57.69% 76 26 TAIR8 Avg. embryo expression (dissected): '30.866'
Avg. embryo expression (LCM): '16.2257'
AT2G26450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.00709 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.841 x 10-3 15 9 43 33 62.50% 43.42% 24 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028216'
Avg. expression score for this sample: '18.9353'
Avg. expression score in LCM sample: '11.5232'
Tissue used: 'pure endosperm, no chalazal'
AT2G26450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 22 9 3 5 70.97% 62.50% 31 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028216'
Avg. expression score for this sample: '4.0982'
Avg. expression score in LCM sample: '11.5232'
Tissue used: 'full endosperm'
AT2G26450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.351 x 10-3 2 15 11.76% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.48972 x 10-1 11 6 64.71% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.31167 x 10-1 146 193 27 38 43.07% 58.46% 339 65 TAIR8 Avg. embryo expression (dissected): '597.053'
Avg. embryo expression (LCM): '384.217'
AT2G26440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5181 x 10-2 11 16 40.74% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.583 x 10-2 451 424 105 451 51.54% 81.12% 875 556 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015958'
Avg. expression score for this sample: '1132.84'
Avg. expression score in LCM sample: '427.856'
Tissue used: 'full endosperm'
AT2G26440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5 x 10-7 100 16 86.21% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G26440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7736 x 10-1 407 303 144 389 57.32% 72.98% 710 533 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015958'
Avg. expression score for this sample: '1235.63'
Avg. expression score in LCM sample: '427.856'
Tissue used: 'pure endosperm, no chalazal'
AT2G26430 RCY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '913.32'
Avg. expression score in LCM sample: '203.463'
Tissue used: 'pure endosperm, no chalazal'
AT2G26430 RCY1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'