GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G169998	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.936946 x 10^-1	113	111	104	70	50.45%	40.23%	224	174	RefGen V2	χ2 p-value for B73 x Mo17: '.8936946' χ2 p-value for Mo17 x B73: '.0099508' Biased in favor of strain: ''
GRMZM2G169998	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.99742 x 10^-2	102	19	57	80	84.30%	58.39%	121	137	RefGen V2	χ2 p-value for B73 x Mo17: '.0000389' χ2 p-value for Mo17 x B73: '.0399742' Biased in favor of strain: ''
GRMZM2G169994	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4512 x 10^-3	369	134	182	109	73.36%	37.46%	503	291	RefGen V2	χ2 p-value for B73 x Mo17: '.0014512' χ2 p-value for Mo17 x B73: '4.10e-26' Biased in favor of strain: 'B73'
GRMZM2G169994	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	998	215	1229	233	82.28%	15.94%	1213	1462	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169973	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.275083 x 10^-1	37	25	48	30	59.68%	38.46%	62	78	RefGen V2	χ2 p-value for B73 x Mo17: '.1275083' χ2 p-value for Mo17 x B73: '.0415401' Biased in favor of strain: ''
GRMZM2G169973	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G169967	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8863 x 10^-3	32	3	20	3	91.43%	13.04%	35	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0018863' χ2 p-value for Mo17 x B73: '4.89e-08' Biased in favor of strain: 'B73'
GRMZM2G169967	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.647058 x 10^-1	103	84	99	32	55.08%	24.43%	187	131	RefGen V2	χ2 p-value for B73 x Mo17: '.1647058' χ2 p-value for Mo17 x B73: '4.80e-09' Biased in favor of strain: ''
GRMZM2G169953	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	1	0.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G169953	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	2	0.00%	100.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G169943	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.52702 x 10^-2	15	1	12	11	93.75%	47.83%	16	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0215569' χ2 p-value for Mo17 x B73: '.0552702' Biased in favor of strain: ''
GRMZM2G169943	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.98 x 10^-10	140	32	103	31	81.40%	23.13%	172	134	RefGen V2	χ2 p-value for B73 x Mo17: '1.80e-16' χ2 p-value for Mo17 x B73: '4.98e-10' Biased in favor of strain: 'B73'
GRMZM2G169931	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.218148 x 10^-1	36	25	37	34	59.02%	47.89%	61	71	RefGen V2	χ2 p-value for B73 x Mo17: '.159011' χ2 p-value for Mo17 x B73: '.7218148' Biased in favor of strain: ''
GRMZM2G169931	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.070469 x 10^-1	58	19	10	64	75.32%	86.49%	77	74	RefGen V2	χ2 p-value for B73 x Mo17: '.1070469' χ2 p-value for Mo17 x B73: '.0002983' Biased in favor of strain: ''
GRMZM2G169927	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25 x 10^-7	40	100	47	215	28.57%	82.06%	140	262	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-21' χ2 p-value for Mo17 x B73: '1.25e-07' Biased in favor of strain: 'Mo17'
GRMZM2G169927	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.37 x 10^-5	117	186	81	180	38.61%	68.97%	303	261	RefGen V2	χ2 p-value for B73 x Mo17: '.0000737' χ2 p-value for Mo17 x B73: '8.90e-10' Biased in favor of strain: 'Mo17'
GRMZM2G169914	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.52 x 10^-17	574	260	453	234	68.82%	34.06%	834	687	RefGen V2	χ2 p-value for B73 x Mo17: '1.55e-27' χ2 p-value for Mo17 x B73: '6.52e-17' Biased in favor of strain: 'B73'
GRMZM2G169914	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7 x 10^-13	302	55	149	77	84.59%	34.07%	357	226	RefGen V2	χ2 p-value for B73 x Mo17: '6.70e-13' χ2 p-value for Mo17 x B73: '2.61e-25' Biased in favor of strain: 'B73'
GRMZM2G169890	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.656 x 10^-4	601	224	726	409	72.85%	36.04%	825	1135	RefGen V2	χ2 p-value for B73 x Mo17: '.0001656' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169890	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.94 x 10^-10	924	514	971	710	64.26%	42.24%	1438	1681	RefGen V2	χ2 p-value for B73 x Mo17: '3.02e-27' χ2 p-value for Mo17 x B73: '1.94e-10' Biased in favor of strain: 'B73'
GRMZM2G169871	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.67385 x 10^-2	482	543	462	659	47.02%	58.79%	1025	1121	RefGen V2	χ2 p-value for B73 x Mo17: '.0567385' χ2 p-value for Mo17 x B73: '4.01e-09' Biased in favor of strain: ''
GRMZM2G169871	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67 x 10^-17	267	313	166	680	46.03%	80.38%	580	846	RefGen V2	χ2 p-value for B73 x Mo17: '5.60e-26' χ2 p-value for Mo17 x B73: '2.67e-17' Biased in favor of strain: 'Mo17'
GRMZM2G169825	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.34 x 10^-15	192	16	109	24	92.31%	18.05%	208	133	RefGen V2	χ2 p-value for B73 x Mo17: '4.34e-15' χ2 p-value for Mo17 x B73: '1.26e-32' Biased in favor of strain: 'B73'
GRMZM2G169825	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48 x 10^-12	140	37	124	36	79.10%	22.50%	177	160	RefGen V2	χ2 p-value for B73 x Mo17: '9.79e-15' χ2 p-value for Mo17 x B73: '3.48e-12' Biased in favor of strain: 'B73'
GRMZM2G169820	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.98421 x 10^-2	524	456	479	399	53.47%	45.44%	980	878	RefGen V2	χ2 p-value for B73 x Mo17: '.0298421' χ2 p-value for Mo17 x B73: '.0069367' Biased in favor of strain: 'B73'
GRMZM2G169820	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.906 x 10^-4	40	42	24	144	48.78%	85.71%	82	168	RefGen V2	χ2 p-value for B73 x Mo17: '.0005906' χ2 p-value for Mo17 x B73: '1.63e-07' Biased in favor of strain: 'Mo17'
GRMZM2G169812	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	7	0	100.00%	0.00%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G169812	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	4	0		0.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G169782	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.937686 x 10^-1	13	9	12	7	59.09%	36.84%	22	19	RefGen V2	χ2 p-value for B73 x Mo17: '.3937686' χ2 p-value for Mo17 x B73: '.2513491' Biased in favor of strain: ''
GRMZM2G169782	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	6	100.00%	100.00%	1	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G169773	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.133 x 10^-4	96	82	48	196	53.93%	80.33%	178	244	RefGen V2	χ2 p-value for B73 x Mo17: '.0003133' χ2 p-value for Mo17 x B73: '5.99e-06' Biased in favor of strain: 'Mo17'
GRMZM2G169773	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56494 x 10^-2	181	230	184	242	44.04%	56.81%	411	426	RefGen V2	χ2 p-value for B73 x Mo17: '.0156494' χ2 p-value for Mo17 x B73: '.0049525' Biased in favor of strain: 'Mo17'
GRMZM2G169699	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.646116 x 10^-1	69	64	104	60	51.88%	36.59%	133	164	RefGen V2	χ2 p-value for B73 x Mo17: '.6646116' χ2 p-value for Mo17 x B73: '.0005908' Biased in favor of strain: ''
GRMZM2G169699	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.41 x 10^-15	257	22	130	94	92.11%	41.96%	279	224	RefGen V2	χ2 p-value for B73 x Mo17: '1.93e-19' χ2 p-value for Mo17 x B73: '4.41e-15' Biased in favor of strain: 'B73'
GRMZM2G169695	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	0.0	3691	57	80	2724	98.48%	97.15%	3748	2804	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G169695	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	0.0	516	5	10	324	99.04%	97.01%	521	334	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G169688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	21	28	34	20	42.86%	37.04%	49	54	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0567594' Biased in favor of strain: ''
GRMZM2G169688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11902 x 10^-1	21	12	18	25	63.64%	58.14%	33	43	RefGen V2	χ2 p-value for B73 x Mo17: '.711902' χ2 p-value for Mo17 x B73: '.2355588' Biased in favor of strain: ''
GRMZM2G169681	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G169681	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.0583 x 10^-3	8	23	8	36	25.81%	81.82%	31	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0070583' χ2 p-value for Mo17 x B73: '.0000243' Biased in favor of strain: 'Mo17'
GRMZM2G169671	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.871056 x 10^-1	726	686	725	625	51.42%	46.30%	1412	1350	RefGen V2	χ2 p-value for B73 x Mo17: '.2871056' χ2 p-value for Mo17 x B73: '.0064956' Biased in favor of strain: ''
GRMZM2G169671	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.522191 x 10^-1	93	46	59	105	66.91%	64.02%	139	164	RefGen V2	χ2 p-value for B73 x Mo17: '.9522191' χ2 p-value for Mo17 x B73: '.4728772' Biased in favor of strain: ''
GRMZM2G169654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.150002 x 10^-1	416	226	286	478	64.80%	62.57%	642	764	RefGen V2	χ2 p-value for B73 x Mo17: '.3150002' χ2 p-value for Mo17 x B73: '.0161844' Biased in favor of strain: ''
GRMZM2G169654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.979366 x 10^-1	51	23	31	42	68.92%	57.53%	74	73	RefGen V2	χ2 p-value for B73 x Mo17: '.0011342' χ2 p-value for Mo17 x B73: '.1979366' Biased in favor of strain: ''
GRMZM2G169648	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.09834 x 10^-1	280	252	197	187	52.63%	48.70%	532	384	RefGen V2	χ2 p-value for B73 x Mo17: '.2247653' χ2 p-value for Mo17 x B73: '.609834' Biased in favor of strain: ''
GRMZM2G169648	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.94887 x 10^-1	73	29	37	80	71.57%	68.38%	102	117	RefGen V2	χ2 p-value for B73 x Mo17: '.2936419' χ2 p-value for Mo17 x B73: '.694887' Biased in favor of strain: ''
GRMZM2G169645	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.047608 x 10^-1	16	3	11	2	84.21%	15.38%	19	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1047608' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: ''
GRMZM2G169645	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.10872 x 10^-2	20	9	22	7	68.97%	24.14%	29	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0410872' χ2 p-value for Mo17 x B73: '.0053457' Biased in favor of strain: 'B73'
GRMZM2G169628	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.46707 x 10^-2	10	19	3	28	34.48%	90.32%	29	31	RefGen V2	χ2 p-value for B73 x Mo17: '.0946707' χ2 p-value for Mo17 x B73: '7.12e-06' Biased in favor of strain: ''
GRMZM2G169628	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.88 x 10^-5	20	35	3	45	36.36%	93.75%	55	48	RefGen V2	χ2 p-value for B73 x Mo17: '1.87e-06' χ2 p-value for Mo17 x B73: '.0000688' Biased in favor of strain: 'Mo17'
GRMZM2G169617	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	0	3	44.44%	100.00%	9	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572937' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G169617	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	21	9	7	6	70.00%	46.15%	30	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0284597' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G169615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	669	55	770	86	92.40%	10.05%	724	856	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	323	3	160	23	99.08%	12.57%	326	183	RefGen V2	χ2 p-value for B73 x Mo17: '2.18e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169593	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.800741 x 10^-1	284	134	169	295	67.94%	63.58%	418	464	RefGen V2	χ2 p-value for B73 x Mo17: '.5800741' χ2 p-value for Mo17 x B73: '.1580839' Biased in favor of strain: ''
GRMZM2G169593	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07334 x 10^-2	226	140	251	197	61.75%	43.97%	366	448	RefGen V2	χ2 p-value for B73 x Mo17: '6.95e-06' χ2 p-value for Mo17 x B73: '.0107334' Biased in favor of strain: 'B73'
GRMZM2G169580	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.53 x 10^-20	1432	843	1576	1100	62.95%	41.11%	2275	2676	RefGen V2	χ2 p-value for B73 x Mo17: '4.94e-35' χ2 p-value for Mo17 x B73: '3.53e-20' Biased in favor of strain: 'B73'
GRMZM2G169580	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7 x 10^-17	1856	631	1512	1113	74.63%	42.40%	2487	2625	RefGen V2	χ2 p-value for B73 x Mo17: '3.70e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169562	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.14 x 10^-8	71	3	43	7	95.95%	14.00%	74	50	RefGen V2	χ2 p-value for B73 x Mo17: '9.14e-08' χ2 p-value for Mo17 x B73: '2.79e-15' Biased in favor of strain: 'B73'
GRMZM2G169562	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.77 x 10^-6	63	9	62	19	87.50%	23.46%	72	81	RefGen V2	χ2 p-value for B73 x Mo17: '1.97e-10' χ2 p-value for Mo17 x B73: '1.77e-06' Biased in favor of strain: 'B73'
GRMZM2G169558	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5 x 10^-10	74	8	70	12	90.24%	14.63%	82	82	RefGen V2	χ2 p-value for B73 x Mo17: '3.13e-13' χ2 p-value for Mo17 x B73: '1.50e-10' Biased in favor of strain: 'B73'
GRMZM2G169558	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.321 x 10^-4	80	16	59	33	83.33%	35.87%	96	92	RefGen V2	χ2 p-value for B73 x Mo17: '.0005321' χ2 p-value for Mo17 x B73: '3.70e-10' Biased in favor of strain: 'B73'
GRMZM2G169539	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4793	1731	2563	3562	73.47%	58.16%	6524	6125	RefGen V2	χ2 p-value for B73 x Mo17: '2.25e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169539	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.13 x 10^-10	1145	681	1063	792	62.71%	42.70%	1826	1855	RefGen V2	χ2 p-value for B73 x Mo17: '1.82e-27' χ2 p-value for Mo17 x B73: '3.13e-10' Biased in favor of strain: 'B73'
GRMZM2G169516	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24622 x 10^-2	127	88	98	66	59.07%	40.24%	215	164	RefGen V2	χ2 p-value for B73 x Mo17: '.0078192' χ2 p-value for Mo17 x B73: '.0124622' Biased in favor of strain: 'B73'
GRMZM2G169516	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.196536 x 10^-1	285	115	110	233	71.25%	67.93%	400	343	RefGen V2	χ2 p-value for B73 x Mo17: '.0518406' χ2 p-value for Mo17 x B73: '.6196536' Biased in favor of strain: ''
GRMZM2G169486	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	6	7	57.14%	53.85%	7	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5929702' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: ''
GRMZM2G169486	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	7	1	7	63.16%	87.50%	19	8	RefGen V2	χ2 p-value for B73 x Mo17: '.2513491' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM2G169462	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083652 x 10^-1	7	3	8	9	70.00%	52.94%	10	17	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: ''
GRMZM2G169462	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635445 x 10^-1	5	5	11	14	50.00%	56.00%	10	25	RefGen V2	χ2 p-value for B73 x Mo17: '.2635445' χ2 p-value for Mo17 x B73: '.2578989' Biased in favor of strain: ''
GRMZM2G169451	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.84888 x 10^-2	677	295	319	530	69.65%	62.43%	972	849	RefGen V2	χ2 p-value for B73 x Mo17: '.0484888' χ2 p-value for Mo17 x B73: '.0087691' Biased in favor of strain: ''
GRMZM2G169451	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.464936 x 10^-1	405	207	360	344	66.18%	48.86%	612	704	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-15' χ2 p-value for Mo17 x B73: '.5464936' Biased in favor of strain: ''
GRMZM2G169449	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.598747 x 10^-1	148	92	130	123	61.67%	48.62%	240	253	RefGen V2	χ2 p-value for B73 x Mo17: '.0003006' χ2 p-value for Mo17 x B73: '.6598747' Biased in favor of strain: ''
GRMZM2G169449	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.521349 x 10^-1	86	32	57	82	72.88%	58.99%	118	139	RefGen V2	χ2 p-value for B73 x Mo17: '.1521349' χ2 p-value for Mo17 x B73: '.0549548' Biased in favor of strain: ''
GRMZM2G169440	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.55 x 10^-26	240	3	111	10	98.77%	8.26%	243	121	RefGen V2	χ2 p-value for B73 x Mo17: '2.55e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169440	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	343	38	234	16	90.03%	6.40%	381	250	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169432	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05152 x 10^-2	191	141	117	81	57.53%	40.91%	332	198	RefGen V2	χ2 p-value for B73 x Mo17: '.0060676' χ2 p-value for Mo17 x B73: '.0105152' Biased in favor of strain: 'B73'
GRMZM2G169432	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.007904 x 10^-1	252	144	132	227	63.64%	63.23%	396	359	RefGen V2	χ2 p-value for B73 x Mo17: '.2007904' χ2 p-value for Mo17 x B73: '.1673316' Biased in favor of strain: ''
GRMZM2G169405	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	2	8	55.56%	80.00%	9	10	RefGen V2	χ2 p-value for B73 x Mo17: '.4794898' χ2 p-value for Mo17 x B73: '.3710935' Biased in favor of strain: ''
GRMZM2G169405	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.927384 x 10^-1	17	16	27	28	51.52%	50.91%	33	55	RefGen V2	χ2 p-value for B73 x Mo17: '.8618044' χ2 p-value for Mo17 x B73: '.8927384' Biased in favor of strain: ''
GRMZM2G169398	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.913659 x 10^-1	56	43	45	65	56.57%	59.09%	99	110	RefGen V2	χ2 p-value for B73 x Mo17: '.1913659' χ2 p-value for Mo17 x B73: '.0565303' Biased in favor of strain: ''
GRMZM2G169398	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.12 x 10^-6	12	33	4	58	26.67%	93.55%	45	62	RefGen V2	χ2 p-value for B73 x Mo17: '1.25e-08' χ2 p-value for Mo17 x B73: '7.12e-06' Biased in favor of strain: 'Mo17'
GRMZM2G169391	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	2	5	0.00%	71.43%	5	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: ''
GRMZM2G169391	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.993957 x 10^-1	50	22	31	38	69.44%	55.07%	72	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0009674' χ2 p-value for Mo17 x B73: '.3993957' Biased in favor of strain: ''
GRMZM2G169384	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.962534 x 10^-1	36	28	31	29	56.25%	48.33%	64	60	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: ''
GRMZM2G169384	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.53229 x 10^-1	45	27	18	51	62.50%	73.91%	72	69	RefGen V2	χ2 p-value for B73 x Mo17: '.453229' χ2 p-value for Mo17 x B73: '.201643' Biased in favor of strain: ''
GRMZM2G169382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.35 x 10^-19	918	741	308	1092	55.33%	78.00%	1659	1400	RefGen V2	χ2 p-value for B73 x Mo17: '1.22e-22' χ2 p-value for Mo17 x B73: '2.35e-19' Biased in favor of strain: 'Mo17'
GRMZM2G169382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.19 x 10^-18	271	542	64	205	33.33%	76.21%	813	269	RefGen V2	χ2 p-value for B73 x Mo17: '2.01e-21' χ2 p-value for Mo17 x B73: '8.19e-18' Biased in favor of strain: 'Mo17'
GRMZM2G169372	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.063285 x 10^-1	336	310	164	320	52.01%	66.12%	646	484	RefGen V2	χ2 p-value for B73 x Mo17: '.3063285' χ2 p-value for Mo17 x B73: '1.33e-12' Biased in favor of strain: ''
GRMZM2G169372	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21 x 10^-25	1012	245	761	659	80.51%	46.41%	1257	1420	RefGen V2	χ2 p-value for B73 x Mo17: '2.21e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G169365	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.257527 x 10^-1	492	276	341	463	64.06%	57.59%	768	804	RefGen V2	χ2 p-value for B73 x Mo17: '.1257527' χ2 p-value for Mo17 x B73: '4.72e-08' Biased in favor of strain: ''
GRMZM2G169365	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0939 x 10^-3	359	264	318	245	57.62%	43.52%	623	563	RefGen V2	χ2 p-value for B73 x Mo17: '.0001412' χ2 p-value for Mo17 x B73: '.0020939' Biased in favor of strain: 'B73'
GRMZM2G169363	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.7909 x 10^-3	104	69	44	80	60.12%	64.52%	173	124	RefGen V2	χ2 p-value for B73 x Mo17: '.0077909' χ2 p-value for Mo17 x B73: '.0012254' Biased in favor of strain: ''
GRMZM2G169363	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.900807 x 10^-1	918	422	384	810	68.51%	67.84%	1340	1194	RefGen V2	χ2 p-value for B73 x Mo17: '.1529278' χ2 p-value for Mo17 x B73: '.3900807' Biased in favor of strain: ''
GRMZM2G169360	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.694562 x 10^-1	36	9	17	24	80.00%	58.54%	45	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0577829' χ2 p-value for Mo17 x B73: '.2694562' Biased in favor of strain: ''
GRMZM2G169360	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.719 x 10^-4	58	9	30	9	86.57%	23.08%	67	39	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-09' χ2 p-value for Mo17 x B73: '.0007719' Biased in favor of strain: 'B73'
GRMZM2G169333	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.560565 x 10^-1	25	20	20	7	55.56%	25.93%	45	27	RefGen V2	χ2 p-value for B73 x Mo17: '.4560565' χ2 p-value for Mo17 x B73: '.0123546' Biased in favor of strain: ''
GRMZM2G169333	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.170598 x 10^-1	11	7	1	17	61.11%	94.44%	18	18	RefGen V2	χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G169329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.236735 x 10^-1	21	2	6	10	91.30%	62.50%	23	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0121933' χ2 p-value for Mo17 x B73: '.7236735' Biased in favor of strain: ''
GRMZM2G169329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	5	3	1	68.75%	25.00%	16	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1336144' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''

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