Displaying data sets 112501 - 112600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G27180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.66319'
Avg. expression score in LCM sample: '7.80459'
Tissue used: 'full endosperm'
AT2G27180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.4706'
Avg. embryo expression (LCM): '13.3498'
AT2G27180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.6038'
Avg. expression score in LCM sample: '7.80459'
Tissue used: 'pure endosperm, no chalazal'
AT2G27180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27170 TTN7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.262 x 10-3 56 5 91.80% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27170 TTN7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-6 149 15 90.85% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27170 TTN7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.88056 x 10-1 44 60 14 14 42.31% 50.00% 104 28 TAIR8 Avg. embryo expression (dissected): '447.941'
Avg. embryo expression (LCM): '345.198'
AT2G27170 TTN7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.089 x 10-3 109 31 39 144 77.86% 78.69% 140 183 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02161'
Avg. expression score for this sample: '506.34'
Avg. expression score in LCM sample: '84.6747'
Tissue used: 'full endosperm'
AT2G27170 TTN7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.39564 x 10-1 32 7 82.05% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27170 TTN7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.17859 x 10-1 45 25 27 44 64.29% 61.97% 70 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02161'
Avg. expression score for this sample: '283.372'
Avg. expression score in LCM sample: '84.6747'
Tissue used: 'pure endosperm, no chalazal'
AT2G27160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.542102'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G27160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.14753'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G27160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G27160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27150 AAO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.8604 x 10-2 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27150 AAO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27150 AAO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.16093 x 10-1 43 3 93.48% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27150 AAO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034426'
Avg. expression score for this sample: '21.6226'
Avg. expression score in LCM sample: '12.214'
Tissue used: 'pure endosperm, no chalazal'
AT2G27150 AAO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.2397 x 10-2 17 1 5 20 94.44% 80.00% 18 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034426'
Avg. expression score for this sample: '41.1579'
Avg. expression score in LCM sample: '12.214'
Tissue used: 'full endosperm'
AT2G27150 AAO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.5645'
Avg. embryo expression (LCM): '6.37976'
AT2G27145 LCR9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G27145 LCR9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G27145 LCR9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27145 LCR9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27145 LCR9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G27145 LCR9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.20219'
Avg. expression score in LCM sample: '19.0632'
Tissue used: 'full endosperm'
AT2G27140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.342361'
Avg. embryo expression (LCM): '0'
AT2G27140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.96788'
Avg. expression score in LCM sample: '19.0632'
Tissue used: 'pure endosperm, no chalazal'
AT2G27140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.4 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.9107'
Avg. embryo expression (LCM): '24.7278'
AT2G27130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.8531'
Avg. expression score in LCM sample: '11.5673'
Tissue used: 'full endosperm'
AT2G27130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.6608'
Avg. expression score in LCM sample: '11.5673'
Tissue used: 'pure endosperm, no chalazal'
AT2G27130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27120 TIL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8194 x 10-2 296 173 63.11% 469 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27120 TIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.44315 x 10-1 8 6 7 3 57.14% 30.00% 14 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.164547'
Avg. expression score for this sample: '4.45753'
Avg. expression score in LCM sample: '12.4638'
Tissue used: 'pure endosperm, no chalazal'
AT2G27120 TIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.77713 x 10-1 0 2 5 7 0.00% 58.33% 2 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.164547'
Avg. expression score for this sample: '1.72977'
Avg. expression score in LCM sample: '12.4638'
Tissue used: 'full endosperm'
AT2G27120 TIL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7048 x 10-2 149 73 67.12% 222 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27120 TIL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '.299265'
Avg. embryo expression (LCM): '.389316'
AT2G27120 TIL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27110 FRS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.26564 x 10-1 38 12 76.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27110 FRS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-6 234 38 86.03% 272 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27110 FRS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.12682 x 10-1 51 34 27 76 60.00% 73.79% 85 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.051058'
Avg. expression score for this sample: '138.129'
Avg. expression score in LCM sample: '104.267'
Tissue used: 'pure endosperm, no chalazal'
AT2G27110 FRS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7804 x 10-2 135 51 103 277 72.58% 72.89% 186 380 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.051058'
Avg. expression score for this sample: '161.73'
Avg. expression score in LCM sample: '104.267'
Tissue used: 'full endosperm'
AT2G27110 FRS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.93718 x 10-1 38 41 16 16 48.10% 50.00% 79 32 TAIR8 Avg. embryo expression (dissected): '128.718'
Avg. embryo expression (LCM): '83.8034'
AT2G27110 FRS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-7 206 29 87.66% 235 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27100 SE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27100 SE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '363.987'
Avg. embryo expression (LCM): '303.742'
AT2G27100 SE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '205.139'
Avg. expression score in LCM sample: '102.753'
Tissue used: 'pure endosperm, no chalazal'
AT2G27100 SE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27100 SE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27100 SE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '213.414'
Avg. expression score in LCM sample: '102.753'
Tissue used: 'full endosperm'
AT2G27090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 2 0 75.00% 0.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '161.109'
Avg. expression score in LCM sample: '58.8358'
Tissue used: 'full endosperm'
AT2G27090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '66.8116'
Avg. embryo expression (LCM): '66.7112'
AT2G27090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '115.035'
Avg. expression score in LCM sample: '58.8358'
Tissue used: 'pure endosperm, no chalazal'
AT2G27090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2353 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-22 411 45 90.13% 456 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.77 x 10-4 131 27 82.91% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.44655 x 10-1 578 142 351 389 80.28% 52.57% 720 740 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000321'
Avg. expression score for this sample: '1040.2'
Avg. expression score in LCM sample: '21.7529'
Tissue used: 'pure endosperm, no chalazal'
AT2G27080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.809 x 10-3 124 65 14 17 65.61% 54.84% 189 31 TAIR8 Avg. embryo expression (dissected): '200.871'
Avg. embryo expression (LCM): '5.16158'
AT2G27080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3 x 10-6 920 307 495 1171 74.98% 70.29% 1227 1666 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000321'
Avg. expression score for this sample: '1759.35'
Avg. expression score in LCM sample: '21.7529'
Tissue used: 'full endosperm'
AT2G27080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.64759 x 10-1 226 88 71.97% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27070 RR13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.06468 x 10-1 43 12 78.18% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27070 RR13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 129 125 183 488 50.79% 72.73% 254 671 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.908488'
Avg. expression score for this sample: '103.533'
Avg. expression score in LCM sample: '165.969'
Tissue used: 'full endosperm'
AT2G27070 RR13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.03112 x 10-1 148 85 115 262 63.52% 69.50% 233 377 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.908488'
Avg. expression score for this sample: '105.194'
Avg. expression score in LCM sample: '165.969'
Tissue used: 'pure endosperm, no chalazal'
AT2G27070 RR13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 5 7 33.33% 58.33% 6 12 TAIR8 Avg. embryo expression (dissected): '4.57579'
Avg. embryo expression (LCM): '0'
AT2G27070 RR13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5 x 10-24 2369 566 80.72% 2935 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27070 RR13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 681 515 56.94% 1196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1282 x 10-1 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 7 5 6 1 58.33% 14.29% 12 7 TAIR8 Avg. embryo expression (dissected): '34.6173'
Avg. embryo expression (LCM): '24.7278'
AT2G27060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 3 0.00% 75.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.412113'
Avg. expression score for this sample: '7.72697'
Avg. expression score in LCM sample: '3.77736'
Tissue used: 'pure endosperm, no chalazal'
AT2G27060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.49897 x 10-1 9 5 6 3 64.29% 33.33% 14 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.412113'
Avg. expression score for this sample: '25.4504'
Avg. expression score in LCM sample: '3.77736'
Tissue used: 'full endosperm'
AT2G27050 EIL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.13649 x 10-1 2 1 6 3 66.67% 33.33% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '66.2992'
Avg. expression score in LCM sample: '11.6848'
Tissue used: 'full endosperm'
AT2G27050 EIL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27050 EIL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.2349'
Avg. embryo expression (LCM): '16.0875'
AT2G27050 EIL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '47.9379'
Avg. expression score in LCM sample: '11.6848'
Tissue used: 'pure endosperm, no chalazal'
AT2G27050 EIL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27050 EIL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27040 AGO4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.46 x 10-4 336 100 77.06% 436 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27040 AGO4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-18 391 59 86.89% 450 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27040 AGO4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.24014 x 10-1 269 113 163 243 70.42% 59.85% 382 406 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.22568'
Avg. expression score for this sample: '330.74'
Avg. expression score in LCM sample: '166.263'
Tissue used: 'pure endosperm, no chalazal'
AT2G27040 AGO4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.34228 x 10-1 470 459 151 101 50.59% 40.08% 929 252 TAIR8 Avg. embryo expression (dissected): '764.948'
Avg. embryo expression (LCM): '774.186'
AT2G27040 AGO4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2569 x 10-2 637 314 322 807 66.98% 71.48% 951 1129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.22568'
Avg. expression score for this sample: '521.56'
Avg. expression score in LCM sample: '166.263'
Tissue used: 'full endosperm'
AT2G27040 AGO4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 190 89 68.10% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27035 ENODL20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1649 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27035 ENODL20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.21191 x 10-1 74 43 7 38 63.25% 84.44% 117 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.823227'
Avg. expression score for this sample: '55.7548'
Avg. expression score in LCM sample: '11.8465'
Tissue used: 'full endosperm'
AT2G27035 ENODL20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 7 1 3 56.25% 75.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.823227'
Avg. expression score for this sample: '10.3723'
Avg. expression score in LCM sample: '11.8465'
Tissue used: 'pure endosperm, no chalazal'
AT2G27035 ENODL20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.54887 x 10-1 42 38 3 9 52.50% 75.00% 80 12 TAIR8 Avg. embryo expression (dissected): '56.9321'
Avg. embryo expression (LCM): '1.68285'