Displaying data sets 112101 - 112200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G27790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.65347'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G27780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.792985'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G27780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G27780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.23184'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G27775 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.582'
Avg. expression score in LCM sample: '6.39359'
Tissue used: 'pure endosperm, no chalazal'
AT2G27775 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27775 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27775 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27775 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.0681'
Avg. expression score in LCM sample: '6.39359'
Tissue used: 'full endosperm'
AT2G27775 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '62.2405'
Avg. embryo expression (LCM): '80.086'
AT2G27770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.55196'
Avg. embryo expression (LCM): '4.0313'
AT2G27770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.14592'
Avg. expression score in LCM sample: '9.42136'
Tissue used: 'pure endosperm, no chalazal'
AT2G27770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.18608'
Avg. expression score in LCM sample: '9.42136'
Tissue used: 'full endosperm'
AT2G27770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27760 IPT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.16424 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27760 IPT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.029 x 10-3 129 21 86.00% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27760 IPT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.62261 x 10-1 39 19 19 72 67.24% 79.12% 58 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201122'
Avg. expression score for this sample: '95.2142'
Avg. expression score in LCM sample: '50.1493'
Tissue used: 'full endosperm'
AT2G27760 IPT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77086 x 10-1 14 8 2 2 63.64% 50.00% 22 4 TAIR8 Avg. embryo expression (dissected): '72.5583'
Avg. embryo expression (LCM): '118.415'
AT2G27760 IPT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 3 6 8 76.92% 57.14% 13 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201122'
Avg. expression score for this sample: '88.6791'
Avg. expression score in LCM sample: '50.1493'
Tissue used: 'pure endosperm, no chalazal'
AT2G27760 IPT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.58584 x 10-1 136 40 77.27% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.7864'
Avg. expression score in LCM sample: '2.68972'
Tissue used: 'pure endosperm, no chalazal'
AT2G27750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.93309'
Avg. expression score in LCM sample: '2.68972'
Tissue used: 'full endosperm'
AT2G27750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.937 x 10-3 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G27740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.778343'
Avg. embryo expression (LCM): '0'
AT2G27740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.1 6 0 0 2 100.00% 100.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000169'
Avg. expression score for this sample: '6.21984'
Avg. expression score in LCM sample: '3.93904'
Tissue used: 'pure endosperm, no chalazal'
AT2G27740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84 x 10-4 10 0 0 19 100.00% 100.00% 10 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000169'
Avg. expression score for this sample: '16.5373'
Avg. expression score in LCM sample: '3.93904'
Tissue used: 'full endosperm'
AT2G27730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.5 x 10-6 880 72 720 300 92.44% 29.41% 952 1020 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003533'
Avg. expression score for this sample: '3708.74'
Avg. expression score in LCM sample: '1108.44'
Tissue used: 'full endosperm'
AT2G27730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2407 44 98.20% 2451 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.387 x 10-3 49 53 48.04% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.5 x 10-5 226 94 31 13 70.62% 29.55% 320 44 TAIR8 Avg. embryo expression (dissected): '2506.05'
Avg. embryo expression (LCM): '1951.03'
AT2G27730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 289 550 34.45% 839 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.4906 x 10-2 362 54 150 141 87.02% 48.45% 416 291 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003533'
Avg. expression score for this sample: '3069.97'
Avg. expression score in LCM sample: '1108.44'
Tissue used: 'pure endosperm, no chalazal'
AT2G27720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2046.73'
Avg. expression score in LCM sample: '490.66'
Tissue used: 'pure endosperm, no chalazal'
AT2G27720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1761.89'
Avg. expression score in LCM sample: '490.66'
Tissue used: 'full endosperm'
AT2G27720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4986.53'
Avg. embryo expression (LCM): '5391.91'
AT2G27710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.5 x 10-14 8969 7488 1267 1239 54.50% 49.44% 16457 2506 TAIR8 Avg. embryo expression (dissected): '16595.9'
Avg. embryo expression (LCM): '16078.3'
AT2G27710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.12485 x 10-1 6581 3467 65.50% 10048 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.309 x 10-3 3482 2070 1380 2808 62.72% 67.05% 5552 4188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-07'
Avg. expression score for this sample: '6244.04'
Avg. expression score in LCM sample: '1867.81'
Tissue used: 'pure endosperm, no chalazal'
AT2G27710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8 x 10-5 4868 2025 4829 7660 70.62% 61.33% 6893 12489 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-07'
Avg. expression score for this sample: '6828.92'
Avg. expression score in LCM sample: '1867.81'
Tissue used: 'full endosperm'
AT2G27710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6467 1188 84.48% 7655 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.21752 x 10-1 1298 765 62.92% 2063 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.48052 x 10-1 607 303 66.70% 910 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 3 25 49 62.50% 66.22% 8 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.741081'
Avg. expression score for this sample: '51.3984'
Avg. expression score in LCM sample: '666.124'
Tissue used: 'full endosperm'
AT2G27700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 3 1 0 25.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '7.17391'
Avg. embryo expression (LCM): '0'
AT2G27700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.56658 x 10-1 38 21 16 25 64.41% 60.98% 59 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.741081'
Avg. expression score for this sample: '144.206'
Avg. expression score in LCM sample: '666.124'
Tissue used: 'pure endosperm, no chalazal'
AT2G27700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.37016 x 10-1 2682 1471 64.58% 4153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27690 CYP94C1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6043 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27690 CYP94C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.12241 x 10-1 228 41 110 113 84.76% 50.67% 269 223 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.745567'
Avg. expression score for this sample: '201.157'
Avg. expression score in LCM sample: '84.6894'
Tissue used: 'pure endosperm, no chalazal'
AT2G27690 CYP94C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.57967 x 10-1 126 33 67 57 79.25% 45.97% 159 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.745567'
Avg. expression score for this sample: '170.403'
Avg. expression score in LCM sample: '84.6894'
Tissue used: 'full endosperm'
AT2G27690 CYP94C1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2135 x 10-2 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27690 CYP94C1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.877 x 10-3 9 16 36.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27690 CYP94C1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.66051 x 10-1 68 56 14 13 54.84% 48.15% 124 27 TAIR8 Avg. embryo expression (dissected): '94.057'
Avg. embryo expression (LCM): '96.048'
AT2G27680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 2 0 50.00% 0.00% 4 2 TAIR8 Avg. embryo expression (dissected): '347.417'
Avg. embryo expression (LCM): '236.629'
AT2G27680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 0 60.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '252.679'
Avg. expression score in LCM sample: '94.8309'
Tissue used: 'pure endosperm, no chalazal'
AT2G27680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.05495 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.63636 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 3 100.00% 75.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '247.429'
Avg. expression score in LCM sample: '94.8309'
Tissue used: 'full endosperm'
AT2G27670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.09859 x 10-1 3 2 3 2 60.00% 40.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.7679'
Avg. expression score in LCM sample: '33.5553'
Tissue used: 'full endosperm'
AT2G27670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.994252'
Avg. embryo expression (LCM): '0'
AT2G27670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.15152 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 2 1 85.71% 33.33% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.6962'
Avg. expression score in LCM sample: '33.5553'
Tissue used: 'pure endosperm, no chalazal'
AT2G27660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 0 33.33% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.45306'
Avg. expression score for this sample: '.997721'
Avg. expression score in LCM sample: '3.80676'
Tissue used: 'pure endosperm, no chalazal'
AT2G27660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.53679 x 10-1 115 45 71.88% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.75535 x 10-1 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.87107 x 10-1 18 6 1 12 75.00% 92.31% 24 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.45306'
Avg. expression score for this sample: '4.06225'
Avg. expression score in LCM sample: '3.80676'
Tissue used: 'full endosperm'
AT2G27660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 3 0 1 2 100.00% 66.67% 3 3 TAIR8 Avg. embryo expression (dissected): '1.46762'
Avg. embryo expression (LCM): '0'
AT2G27650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 2 10 1 2 16.67% 66.67% 12 3 TAIR8 Avg. embryo expression (dissected): '2.85274'
Avg. embryo expression (LCM): '3.26523'
AT2G27650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5149 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 4 6 12 73.33% 66.67% 15 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.861663'
Avg. expression score for this sample: '2.75474'
Avg. expression score in LCM sample: '.764292'
Tissue used: 'pure endosperm, no chalazal'
AT2G27650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4223 x 10-1 6 4 12 18 60.00% 60.00% 10 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.861663'
Avg. expression score for this sample: '2.17066'
Avg. expression score in LCM sample: '.764292'
Tissue used: 'full endosperm'
AT2G27650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.64865 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G27630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02211 x 10-1 8 3 0 13 72.73% 100.00% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.407547'
Avg. expression score for this sample: '3.72282'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G27630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 1 40.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '2.14051'
Avg. embryo expression (LCM): '.891659'
AT2G27630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 2 5 0.00% 71.43% 2 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.407547'
Avg. expression score for this sample: '2.01678'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G27630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.403 x 10-2 8 7 53.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'