Displaying data sets 111001 - 111100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G29570 PCNA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10417 x 10-1 31 4 63 68 88.57% 51.91% 35 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162085'
Avg. expression score for this sample: '63.4067'
Avg. expression score in LCM sample: '84.6159'
Tissue used: 'full endosperm'
AT2G29570 PCNA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.55547 x 10-1 142 107 30 24 57.03% 44.44% 249 54 TAIR8 Avg. embryo expression (dissected): '331.251'
Avg. embryo expression (LCM): '466.086'
AT2G29570 PCNA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 8 61.90% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29570 PCNA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.74713 x 10-1 63 30 28 33 67.74% 54.10% 93 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162085'
Avg. expression score for this sample: '122.102'
Avg. expression score in LCM sample: '84.6159'
Tissue used: 'pure endosperm, no chalazal'
AT2G29570 PCNA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-9 163 28 85.34% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29570 PCNA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0073 x 10-2 107 109 49.54% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29560 ENOC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.4898 x 10-2 178 54 76.72% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29560 ENOC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.05279 x 10-1 45 18 11 35 71.43% 76.09% 63 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.382542'
Avg. expression score for this sample: '87.3258'
Avg. expression score in LCM sample: '44.9021'
Tissue used: 'pure endosperm, no chalazal'
AT2G29560 ENOC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.72883 x 10-1 38 50 4 9 43.18% 69.23% 88 13 TAIR8 Avg. embryo expression (dissected): '116.868'
Avg. embryo expression (LCM): '67.1507'
AT2G29560 ENOC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.06704 x 10-1 79 18 63 98 81.44% 60.87% 97 161 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.382542'
Avg. expression score for this sample: '93.9387'
Avg. expression score in LCM sample: '44.9021'
Tissue used: 'full endosperm'
AT2G29560 ENOC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.13877 x 10-1 20 6 76.92% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29560 ENOC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-9 176 16 91.67% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29550 TUB7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-13 369 48 88.49% 417 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29550 TUB7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.84548 x 10-1 297 152 66.15% 449 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29550 TUB7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.747 x 10-3 24 23 51.06% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29550 TUB7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.00844 x 10-1 47 59 27 19 44.34% 41.30% 106 46 TAIR8 Avg. embryo expression (dissected): '1352.11'
Avg. embryo expression (LCM): '651.715'
AT2G29550 TUB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.60374 x 10-1 77 29 22 42 72.64% 65.62% 106 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205321'
Avg. expression score for this sample: '1109.67'
Avg. expression score in LCM sample: '710.585'
Tissue used: 'pure endosperm, no chalazal'
AT2G29550 TUB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.90348 x 10-1 151 30 109 176 83.43% 61.75% 181 285 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205321'
Avg. expression score for this sample: '799.5'
Avg. expression score in LCM sample: '710.585'
Tissue used: 'full endosperm'
AT2G29540 RPC14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.04572 x 10-1 40 22 17 65 64.52% 79.27% 62 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.613862'
Avg. expression score for this sample: '333.846'
Avg. expression score in LCM sample: '46.078'
Tissue used: 'full endosperm'
AT2G29540 RPC14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.15962 x 10-1 47 54 18 17 46.53% 48.57% 101 35 TAIR8 Avg. embryo expression (dissected): '556.1'
Avg. embryo expression (LCM): '864.143'
AT2G29540 RPC14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.02945 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29540 RPC14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3133 x 10-2 16 19 20 18 45.71% 47.37% 35 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.613862'
Avg. expression score for this sample: '192.283'
Avg. expression score in LCM sample: '46.078'
Tissue used: 'pure endosperm, no chalazal'
AT2G29540 RPC14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.44931 x 10-1 52 18 74.29% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29540 RPC14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.85158 x 10-1 75 33 69.44% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29530 TIM10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.41 x 10-4 39 34 53.42% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29530 TIM10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02941 x 10-1 8 0 0 1 100.00% 100.00% 8 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074022'
Avg. expression score for this sample: '25.6812'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'pure endosperm, no chalazal'
AT2G29530 TIM10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.35095 x 10-1 17 6 0 0 73.91% 23 0 TAIR8 Avg. embryo expression (dissected): '61.355'
Avg. embryo expression (LCM): '165.359'
AT2G29530 TIM10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.35128 x 10-1 41 6 14 27 87.23% 65.85% 47 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074022'
Avg. expression score for this sample: '59.8256'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'full endosperm'
AT2G29530 TIM10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.432 x 10-3 3 6 33.33% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29530 TIM10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.91162 x 10-1 51 8 86.44% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29525 AtIPCS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.01125 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29525 AtIPCS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.19145 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29525 AtIPCS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.13043 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29525 AtIPCS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.46965 x 10-1 7 3 1 1 70.00% 50.00% 10 2 TAIR8 Avg. embryo expression (dissected): '9.58362'
Avg. embryo expression (LCM): '4.19456'
AT2G29525 AtIPCS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02941 x 10-1 5 0 0 4 100.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284773'
Avg. expression score for this sample: '9.93245'
Avg. expression score in LCM sample: '9.81821'
Tissue used: 'pure endosperm, no chalazal'
AT2G29525 AtIPCS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.66355 x 10-1 14 5 2 6 73.68% 75.00% 19 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284773'
Avg. expression score for this sample: '21.0164'
Avg. expression score in LCM sample: '9.81821'
Tissue used: 'full endosperm'
AT2G29520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4 x 10-9 86 3 96.63% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.38 x 10-3 157 36 44 102 81.35% 69.86% 193 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.083265'
Avg. expression score for this sample: '165.701'
Avg. expression score in LCM sample: '78.2517'
Tissue used: 'pure endosperm, no chalazal'
AT2G29510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.89223 x 10-1 75 43 35 20 63.56% 36.36% 118 55 TAIR8 Avg. embryo expression (dissected): '150.275'
Avg. embryo expression (LCM): '76.4817'
AT2G29510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.60911 x 10-1 262 90 127 183 74.43% 59.03% 352 310 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.083265'
Avg. expression score for this sample: '397.418'
Avg. expression score in LCM sample: '78.2517'
Tissue used: 'full endosperm'
AT2G29510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.78004 x 10-1 34 21 61.82% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-7 178 27 86.83% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1290 35 97.36% 1325 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-6 70 57 55.12% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2448 x 10-2 533 209 71.83% 742 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3014 x 10-2 369 144 237 108 71.93% 31.30% 513 345 TAIR8 Avg. embryo expression (dissected): '71039.8'
Avg. embryo expression (LCM): '52.7711'
AT2G29500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.8 x 10-5 1023 167 352 367 85.97% 51.04% 1190 719 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-35'
Avg. expression score for this sample: '74235.3'
Avg. expression score in LCM sample: '82.3377'
Tissue used: 'pure endosperm, no chalazal'
AT2G29500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3386 442 1207 1803 88.45% 59.90% 3828 3010 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-35'
Avg. expression score for this sample: '40945.9'
Avg. expression score in LCM sample: '82.3377'
Tissue used: 'full endosperm'
AT2G29490 GSTU1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.5671 2 4 0 0 33.33% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '1.98822'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29490 GSTU1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.580062'
Avg. embryo expression (LCM): '0'
AT2G29490 GSTU1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29490 GSTU1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29490 GSTU1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.09 x 10-4 91 5 94.79% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29490 GSTU1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6191 x 10-2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29480 GSTU2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29480 GSTU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.274504'
Avg. expression score in LCM sample: '3.10126'
Tissue used: 'pure endosperm, no chalazal'
AT2G29480 GSTU2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29480 GSTU2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.30548'
Avg. expression score in LCM sample: '3.10126'
Tissue used: 'full endosperm'
AT2G29480 GSTU2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29480 GSTU2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29470 GSTU3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 48 0 100.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29470 GSTU3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29470 GSTU3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29470 GSTU3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.339955'
Avg. embryo expression (LCM): '0'
AT2G29470 GSTU3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.30504'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29470 GSTU3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.211859'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29460 GSTU4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.54622 x 10-1 8 5 4 5 61.54% 55.56% 13 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.2204'
Avg. expression score in LCM sample: '9.75942'
Tissue used: 'full endosperm'
AT2G29460 GSTU4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '13.3321'
Avg. embryo expression (LCM): '8.33889'
AT2G29460 GSTU4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29460 GSTU4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 5 0 2 4 100.00% 66.67% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.4363'
Avg. expression score in LCM sample: '9.75942'
Tissue used: 'pure endosperm, no chalazal'
AT2G29460 GSTU4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.74 x 10-4 31 0 100.00% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29460 GSTU4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29452 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29452 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29452 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.64859'
Avg. embryo expression (LCM): '0'
AT2G29452 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29452 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29452 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29450 GSTU5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29450 GSTU5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29450 GSTU5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29450 GSTU5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1936.1'
Avg. embryo expression (LCM): '335.527'
AT2G29450 GSTU5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1059.68'
Avg. expression score in LCM sample: '14.1982'
Tissue used: 'pure endosperm, no chalazal'
AT2G29450 GSTU5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2712.81'
Avg. expression score in LCM sample: '14.1982'
Tissue used: 'full endosperm'
AT2G29440 GSTU6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.65138'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29440 GSTU6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.88488'
Avg. embryo expression (LCM): '6.14114'
AT2G29440 GSTU6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29440 GSTU6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29440 GSTU6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29440 GSTU6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29420 GSTU7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1538 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29420 GSTU7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.0877'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'pure endosperm, no chalazal'
AT2G29420 GSTU7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '29.6339'
Avg. embryo expression (LCM): '21.2868'
AT2G29420 GSTU7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 4 50.00% 80.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '111.421'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'full endosperm'