Displaying data sets 110901 - 111000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G29710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 6 0 0 1 100.00% 100.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '7.97769'
Avg. expression score in LCM sample: '1.76375'
Tissue used: 'full endosperm'
AT2G29710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.210526'
Avg. expression score for this sample: '3.87528'
Avg. expression score in LCM sample: '1.76375'
Tissue used: 'pure endosperm, no chalazal'
AT2G29710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.11765 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.0909 x 10-2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29700 PH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1536 x 10-2 59 7 89.39% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29700 PH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.13 x 10-4 54 3 94.74% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29700 PH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.57865 x 10-1 22 19 15 36 53.66% 70.59% 41 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087057'
Avg. expression score for this sample: '569.945'
Avg. expression score in LCM sample: '208.563'
Tissue used: 'pure endosperm, no chalazal'
AT2G29700 PH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.7448 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29700 PH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.73246 x 10-1 19 24 1 1 44.19% 50.00% 43 2 TAIR8 Avg. embryo expression (dissected): '405.535'
Avg. embryo expression (LCM): '267.309'
AT2G29700 PH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.907 x 10-3 28 12 15 91 70.00% 85.85% 40 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087057'
Avg. expression score for this sample: '550.845'
Avg. expression score in LCM sample: '208.563'
Tissue used: 'full endosperm'
AT2G29690 ASA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.82283 x 10-1 15 2 5 13 88.24% 72.22% 17 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.234869'
Avg. expression score for this sample: '128.202'
Avg. expression score in LCM sample: '66.8461'
Tissue used: 'full endosperm'
AT2G29690 ASA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29690 ASA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 8 1 1 1 88.89% 50.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.234869'
Avg. expression score for this sample: '97.1756'
Avg. expression score in LCM sample: '66.8461'
Tissue used: 'pure endosperm, no chalazal'
AT2G29690 ASA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.44851 x 10-1 8 3 0 1 72.73% 100.00% 11 1 TAIR8 Avg. embryo expression (dissected): '115.42'
Avg. embryo expression (LCM): '132.455'
AT2G29690 ASA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.72481 x 10-1 36 13 73.47% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29690 ASA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 40 10 80.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29680 CDC6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.5585 23 7 76.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29680 CDC6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29680 CDC6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '13.2332'
Avg. embryo expression (LCM): '20.8221'
AT2G29680 CDC6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29680 CDC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.54973'
Avg. expression score in LCM sample: '9.02452'
Tissue used: 'full endosperm'
AT2G29680 CDC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.76276'
Avg. expression score in LCM sample: '9.02452'
Tissue used: 'pure endosperm, no chalazal'
AT2G29679 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29679 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29679 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29679 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29679 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29679 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-15 179 8 95.72% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 681 7 98.98% 688 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8 x 10-5 300 95 83 271 75.95% 76.55% 395 354 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000271'
Avg. expression score for this sample: '167.321'
Avg. expression score in LCM sample: '58.2184'
Tissue used: 'full endosperm'
AT2G29670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.558 x 10-3 71 12 85.54% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.55002 x 10-1 286 108 155 310 72.59% 66.67% 394 465 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000271'
Avg. expression score for this sample: '235.325'
Avg. expression score in LCM sample: '58.2184'
Tissue used: 'pure endosperm, no chalazal'
AT2G29670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4775 x 10-2 76 39 9 12 66.09% 57.14% 115 21 TAIR8 Avg. embryo expression (dissected): '62.6514'
Avg. embryo expression (LCM): '23.4092'
AT2G29660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '78.1875'
Avg. embryo expression (LCM): '25.4437'
AT2G29660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.1848'
Avg. expression score in LCM sample: '6.61406'
Tissue used: 'full endosperm'
AT2G29660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.234'
Avg. expression score in LCM sample: '6.61406'
Tissue used: 'pure endosperm, no chalazal'
AT2G29660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29654 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29654 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29654 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29654 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29654 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.83658'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29654 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29650 PHT4;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29650 PHT4;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.53589 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29650 PHT4;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 0 3 71.43% 100.00% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.3368'
Avg. expression score in LCM sample: '11.7436'
Tissue used: 'full endosperm'
AT2G29650 PHT4;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29650 PHT4;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.641'
Avg. expression score in LCM sample: '11.7436'
Tissue used: 'pure endosperm, no chalazal'
AT2G29650 PHT4;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 1 4 1 0 20.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '28.2112'
Avg. embryo expression (LCM): '10.6999'
AT2G29640 JOSL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 11 4 3 2 73.33% 40.00% 15 5 TAIR8 Avg. embryo expression (dissected): '64.7537'
Avg. embryo expression (LCM): '25.6321'
AT2G29640 JOSL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29640 JOSL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 4 11 14 76.47% 56.00% 17 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.736781'
Avg. expression score for this sample: '62.0826'
Avg. expression score in LCM sample: '32.7176'
Tissue used: 'full endosperm'
AT2G29640 JOSL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.04933 x 10-1 11 5 9 10 68.75% 52.63% 16 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.736781'
Avg. expression score for this sample: '57.0929'
Avg. expression score in LCM sample: '32.7176'
Tissue used: 'pure endosperm, no chalazal'
AT2G29640 JOSL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.138 x 10-2 19 4 82.61% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29640 JOSL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.56 x 10-4 29 2 93.55% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29630 THIC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.652 x 10-3 46 7 86.79% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29630 THIC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.38437 x 10-1 70 32 34 84 68.63% 71.19% 102 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835322'
Avg. expression score for this sample: '367.92'
Avg. expression score in LCM sample: '205.139'
Tissue used: 'pure endosperm, no chalazal'
AT2G29630 THIC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.95415 x 10-1 13 12 52.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29630 THIC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.13397 x 10-1 62 82 21 30 43.06% 58.82% 144 51 TAIR8 Avg. embryo expression (dissected): '446.286'
Avg. embryo expression (LCM): '243.712'
AT2G29630 THIC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.46337 x 10-1 69 29 64 84 70.41% 56.76% 98 148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835322'
Avg. expression score for this sample: '231.599'
Avg. expression score in LCM sample: '205.139'
Tissue used: 'full endosperm'
AT2G29630 THIC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.37528 x 10-1 21 5 80.77% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29628 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29628 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29628 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29628 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29628 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29628 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.346496'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.607945'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29605 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29605 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.217631'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'pure endosperm, no chalazal'
AT2G29605 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29605 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29605 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.418869'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'full endosperm'
AT2G29605 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.7 x 10-5 2 29 6.45% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.69231 x 10-1 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 0 1 0 100.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '56.6431'
Avg. expression score in LCM sample: '5.30595'
Tissue used: 'full endosperm'
AT2G29600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.7356'
Avg. expression score in LCM sample: '5.30595'
Tissue used: 'pure endosperm, no chalazal'
AT2G29600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.97604'
Avg. embryo expression (LCM): '22.6682'
AT2G29590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.27871 x 10-1 113 96 28 7 54.07% 20.00% 209 35 TAIR8 Avg. embryo expression (dissected): '715.781'
Avg. embryo expression (LCM): '517.464'
AT2G29590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.86933 x 10-1 55 32 63.22% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.78925 x 10-1 397 93 234 347 81.02% 59.72% 490 581 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.045613'
Avg. expression score for this sample: '1366.79'
Avg. expression score in LCM sample: '129.283'
Tissue used: 'full endosperm'
AT2G29590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.22965 x 10-1 177 63 60 135 73.75% 69.23% 240 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.045613'
Avg. expression score for this sample: '937.488'
Avg. expression score in LCM sample: '129.283'
Tissue used: 'pure endosperm, no chalazal'
AT2G29590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.07 x 10-4 344 216 61.43% 560 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-30 528 45 92.15% 573 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29580 MAC5B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1483 126 92.17% 1609 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29580 MAC5B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.91235 x 10-1 239 108 95 198 68.88% 67.58% 347 293 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02051'
Avg. expression score for this sample: '187.621'
Avg. expression score in LCM sample: '56.6017'
Tissue used: 'pure endosperm, no chalazal'
AT2G29580 MAC5B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.4 x 10-6 72 6 92.31% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29580 MAC5B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.92972 x 10-1 260 252 89 122 50.78% 57.82% 512 211 TAIR8 Avg. embryo expression (dissected): '340.06'
Avg. embryo expression (LCM): '130.421'
AT2G29580 MAC5B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1406 x 10-2 276 50 174 317 84.66% 64.56% 326 491 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02051'
Avg. expression score for this sample: '160.092'
Avg. expression score in LCM sample: '56.6017'
Tissue used: 'full endosperm'
AT2G29580 MAC5B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-10 720 503 58.87% 1223 TAIR8 Mutant effect: 'N/A (not a MEG)'