| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G171400 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 7 | 15 | 25.00% | 68.18% | 8 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0124186' χ2 p-value for Mo17 x B73: '.8801686' Biased in favor of strain: '' |
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| GRMZM2G171400 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.126221 x 10-1 | 33 | 40 | 78 | 43 | 45.21% | 35.54% | 73 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4126221' χ2 p-value for Mo17 x B73: '.0014635' Biased in favor of strain: '' |
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| GRMZM2G171394 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5005 x 10-3 | 1 | 33 | 10 | 28 | 2.94% | 73.68% | 34 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.07e-08' χ2 p-value for Mo17 x B73: '.0035005' Biased in favor of strain: 'Mo17' |
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| GRMZM2G171394 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.733281 x 10-1 | 12 | 3 | 0 | 14 | 80.00% | 100.00% | 15 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2733281' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G171390 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.311703 x 10-1 | 17 | 2 | 4 | 7 | 89.47% | 63.64% | 19 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0349563' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: '' |
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| GRMZM2G171390 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 4 | 3 | 100.00% | 42.86% | 5 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G171383 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.67 x 10-25 | 387 | 149 | 603 | 150 | 72.20% | 19.92% | 536 | 753 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.67e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G171383 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.47 x 10-14 | 28 | 67 | 222 | 37 | 29.47% | 14.29% | 95 | 259 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.47e-14' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G171373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.61664 x 10-2 | 195 | 119 | 119 | 298 | 62.10% | 71.46% | 314 | 417 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0861664' χ2 p-value for Mo17 x B73: '.0377435' Biased in favor of strain: '' |
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| GRMZM2G171373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 229 | 229 | 201 | 188 | 50.00% | 48.33% | 458 | 389 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5098147' Biased in favor of strain: '' |
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| GRMZM2G171372 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.536 x 10-4 | 121 | 185 | 106 | 186 | 39.54% | 63.70% | 306 | 292 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002536' χ2 p-value for Mo17 x B73: '2.85e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G171372 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.152654 x 10-1 | 183 | 122 | 134 | 254 | 60.00% | 65.46% | 305 | 388 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0135148' χ2 p-value for Mo17 x B73: '.6152654' Biased in favor of strain: '' |
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| GRMZM2G171370 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.10294 x 10-2 | 280 | 87 | 127 | 190 | 76.29% | 59.94% | 367 | 317 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000914' χ2 p-value for Mo17 x B73: '.0110294' Biased in favor of strain: '' |
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| GRMZM2G171370 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.04086 x 10-2 | 214 | 128 | 168 | 134 | 62.57% | 44.37% | 342 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.31e-06' χ2 p-value for Mo17 x B73: '.0504086' Biased in favor of strain: '' |
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| GRMZM2G171367 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.74 x 10-7 | 88 | 31 | 80 | 25 | 73.95% | 23.81% | 119 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.74e-07' χ2 p-value for Mo17 x B73: '7.99e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G171367 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 3 | 3 | 100.00% | 50.00% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G171365 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6 x 10-6 | 62 | 4 | 40 | 11 | 93.94% | 21.57% | 66 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.60e-06' χ2 p-value for Mo17 x B73: '8.37e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G171365 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 10 | 0 | 100.00% | 0.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G171354 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.116726 x 10-1 | 94 | 89 | 74 | 51 | 51.37% | 40.80% | 183 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7116726' χ2 p-value for Mo17 x B73: '.0396687' Biased in favor of strain: '' |
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| GRMZM2G171354 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.660534 x 10-1 | 79 | 44 | 50 | 72 | 64.23% | 59.02% | 123 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5660534' χ2 p-value for Mo17 x B73: '.0730502' Biased in favor of strain: '' |
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| GRMZM2G171349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.875373 x 10-1 | 6 | 10 | 8 | 17 | 37.50% | 68.00% | 16 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133273' χ2 p-value for Mo17 x B73: '.8875373' Biased in favor of strain: '' |
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| GRMZM2G171349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.95918 x 10-2 | 21 | 8 | 11 | 23 | 72.41% | 67.65% | 29 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0157768' χ2 p-value for Mo17 x B73: '.0395918' Biased in favor of strain: '' |
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| GRMZM2G171333 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33825 x 10-2 | 255 | 140 | 188 | 143 | 64.56% | 43.20% | 395 | 331 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.20e-09' χ2 p-value for Mo17 x B73: '.0133825' Biased in favor of strain: 'B73' |
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| GRMZM2G171333 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.25989 x 10-1 | 293 | 156 | 124 | 223 | 65.26% | 64.27% | 449 | 347 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.525989' χ2 p-value for Mo17 x B73: '.3426267' Biased in favor of strain: '' |
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| GRMZM2G171328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G171324 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 555 | 207 | 517 | 205 | 72.83% | 28.39% | 762 | 722 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.94e-36' χ2 p-value for Mo17 x B73: '3.61e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G171324 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.158541 x 10-1 | 55 | 18 | 39 | 37 | 75.34% | 48.68% | 73 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1158541' χ2 p-value for Mo17 x B73: '.0008825' Biased in favor of strain: '' |
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| GRMZM2G171317 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171317 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 1 | 1 | 60.00% | 50.00% | 10 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G171311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.88671 x 10-2 | 38 | 22 | 38 | 14 | 63.33% | 26.92% | 60 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0388671' χ2 p-value for Mo17 x B73: '.0008741' Biased in favor of strain: 'B73' |
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| GRMZM2G171311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.92315 x 10-2 | 15 | 2 | 21 | 9 | 88.24% | 30.00% | 17 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0592315' χ2 p-value for Mo17 x B73: '.0000204' Biased in favor of strain: '' |
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| GRMZM2G171248 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0959 x 10-1 | 28 | 22 | 20 | 73 | 56.00% | 78.49% | 50 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.10959' χ2 p-value for Mo17 x B73: '.0155343' Biased in favor of strain: '' |
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| GRMZM2G171248 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.78 x 10-8 | 680 | 490 | 668 | 447 | 58.12% | 40.09% | 1170 | 1115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.78e-08' χ2 p-value for Mo17 x B73: '3.63e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G171236 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.536 x 10-4 | 165 | 265 | 205 | 284 | 38.37% | 58.08% | 430 | 489 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.42e-06' χ2 p-value for Mo17 x B73: '.0003536' Biased in favor of strain: 'Mo17' |
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| GRMZM2G171236 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.52 x 10-8 | 185 | 195 | 97 | 363 | 48.68% | 78.91% | 380 | 460 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.04e-13' χ2 p-value for Mo17 x B73: '2.52e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G171229 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 25 | 2 | 100.00% | 7.41% | 4 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '6.49e-11' Biased in favor of strain: '' |
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| GRMZM2G171229 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 4 | 3 | 0.00% | 42.86% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G171210 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7 x 10-12 | 95 | 6 | 90 | 17 | 94.06% | 15.89% | 101 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.31e-19' χ2 p-value for Mo17 x B73: '1.70e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G171210 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434287 x 10-1 | 3 | 9 | 8 | 13 | 25.00% | 61.90% | 12 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021995' χ2 p-value for Mo17 x B73: '.6434287' Biased in favor of strain: '' |
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| GRMZM2G171187 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.88823 x 10-2 | 49 | 13 | 37 | 15 | 79.03% | 28.85% | 62 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0388823' χ2 p-value for Mo17 x B73: '7.23e-09' Biased in favor of strain: '' |
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| GRMZM2G171187 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 2 | 5 | 3 | 80.00% | 37.50% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G171181 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.94564 x 10-2 | 53 | 30 | 35 | 19 | 63.86% | 35.19% | 83 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0115837' χ2 p-value for Mo17 x B73: '.0294564' Biased in favor of strain: 'B73' |
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| GRMZM2G171181 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.61965 x 10-2 | 38 | 10 | 16 | 9 | 79.17% | 36.00% | 48 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0661965' χ2 p-value for Mo17 x B73: '.0011432' Biased in favor of strain: '' |
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| GRMZM2G171179 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.58 x 10-14 | 2199 | 808 | 1151 | 1536 | 73.13% | 57.16% | 3007 | 2687 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.58e-14' χ2 p-value for Mo17 x B73: '1.48e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G171179 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.260599 x 10-1 | 2087 | 2093 | 1768 | 1983 | 49.93% | 52.87% | 4180 | 3751 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9260599' χ2 p-value for Mo17 x B73: '.0004473' Biased in favor of strain: '' |
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| GRMZM2G171122 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.09505 x 10-1 | 203 | 224 | 158 | 219 | 47.54% | 58.09% | 427 | 377 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.309505' χ2 p-value for Mo17 x B73: '.0016799' Biased in favor of strain: '' |
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| GRMZM2G171122 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.104205 x 10-1 | 125 | 54 | 52 | 106 | 69.83% | 67.09% | 179 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.368963' χ2 p-value for Mo17 x B73: '.9104205' Biased in favor of strain: '' |
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| GRMZM2G171118 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171118 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 0 | 0 | 60.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171116 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15 x 10-7 | 484 | 299 | 511 | 355 | 61.81% | 40.99% | 783 | 866 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.81e-11' χ2 p-value for Mo17 x B73: '1.15e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G171116 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.542526 x 10-1 | 223 | 68 | 173 | 317 | 76.63% | 64.69% | 291 | 490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003107' χ2 p-value for Mo17 x B73: '.3542526' Biased in favor of strain: '' |
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| GRMZM2G171111 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171111 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G171108 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6037 x 10-3 | 77 | 18 | 94 | 57 | 81.05% | 37.75% | 95 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.42e-09' χ2 p-value for Mo17 x B73: '.0026037' Biased in favor of strain: 'B73' |
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| GRMZM2G171108 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.1248 x 10-3 | 423 | 161 | 198 | 222 | 72.43% | 52.86% | 584 | 420 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0031248' χ2 p-value for Mo17 x B73: '1.93e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G171078 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 5 | 0.00% | 100.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G171078 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G171073 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.830914 x 10-1 | 97 | 81 | 111 | 105 | 54.49% | 48.61% | 178 | 216 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2304305' χ2 p-value for Mo17 x B73: '.6830914' Biased in favor of strain: '' |
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| GRMZM2G171073 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.11902 x 10-1 | 21 | 12 | 12 | 13 | 63.64% | 52.00% | 33 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.711902' χ2 p-value for Mo17 x B73: '.1197949' Biased in favor of strain: '' |
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| GRMZM2G171068 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.969066 x 10-1 | 293 | 173 | 200 | 424 | 62.88% | 67.95% | 466 | 624 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0825319' χ2 p-value for Mo17 x B73: '.4969066' Biased in favor of strain: '' |
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| GRMZM2G171068 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.41 x 10-6 | 493 | 330 | 393 | 277 | 59.90% | 41.34% | 823 | 670 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.33e-08' χ2 p-value for Mo17 x B73: '7.41e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G171060 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 2 | 100.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G171060 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G171051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 6 | 2 | 50.00% | 25.00% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G171045 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.17 x 10-7 | 94 | 24 | 56 | 14 | 79.66% | 20.00% | 118 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.16e-10' χ2 p-value for Mo17 x B73: '5.17e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G171045 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.53 x 10-8 | 138 | 20 | 76 | 39 | 87.34% | 33.91% | 158 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.53e-08' χ2 p-value for Mo17 x B73: '9.26e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G171022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.455863 x 10-1 | 12 | 7 | 4 | 26 | 63.16% | 86.67% | 19 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7455863' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: '' |
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| GRMZM2G171022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.838398 x 10-1 | 24 | 33 | 28 | 23 | 42.11% | 45.10% | 57 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2332302' χ2 p-value for Mo17 x B73: '.4838398' Biased in favor of strain: '' |
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| GRMZM2G171006 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.45 x 10-7 | 78 | 16 | 57 | 13 | 82.98% | 18.57% | 94 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-10' χ2 p-value for Mo17 x B73: '1.45e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G171006 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.691383 x 10-1 | 25 | 7 | 31 | 2 | 78.12% | 6.06% | 32 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1691383' χ2 p-value for Mo17 x B73: '1.52e-13' Biased in favor of strain: '' |
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| GRMZM2G170982 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 10 | 4 | 5 | 23.08% | 55.56% | 13 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008561' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: '' |
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| GRMZM2G170982 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 15 | 22 | 11 | 11 | 40.54% | 50.00% | 37 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2498174' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G170969 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.635605 x 10-1 | 84 | 22 | 62 | 99 | 79.25% | 61.49% | 106 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0060112' χ2 p-value for Mo17 x B73: '.1635605' Biased in favor of strain: '' |
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| GRMZM2G170969 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1949 | 759 | 1831 | 760 | 71.97% | 29.33% | 2708 | 2591 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G170958 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.72 x 10-19 | 132 | 22 | 228 | 46 | 85.71% | 16.79% | 154 | 274 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.72e-19' χ2 p-value for Mo17 x B73: '4.04e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G170958 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G170941 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.71429 x 10-2 | 45 | 10 | 31 | 31 | 81.82% | 50.00% | 55 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0171429' χ2 p-value for Mo17 x B73: '.0053712' Biased in favor of strain: '' |
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| GRMZM2G170941 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.572726 x 10-1 | 52 | 35 | 64 | 54 | 59.77% | 45.76% | 87 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0683653' χ2 p-value for Mo17 x B73: '.3572726' Biased in favor of strain: '' |
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| GRMZM2G170934 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4342 | 344 | 2039 | 683 | 92.66% | 25.09% | 4686 | 2722 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G170934 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3768 | 251 | 2917 | 261 | 93.75% | 8.21% | 4019 | 3178 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G170896 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.473127 x 10-1 | 144 | 131 | 115 | 114 | 52.36% | 49.78% | 275 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4330815' χ2 p-value for Mo17 x B73: '.9473127' Biased in favor of strain: '' |
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| GRMZM2G170896 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.795193 x 10-1 | 35 | 14 | 25 | 36 | 71.43% | 59.02% | 49 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795193' χ2 p-value for Mo17 x B73: '.2049762' Biased in favor of strain: '' |
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| GRMZM2G170890 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.836204 x 10-1 | 108 | 86 | 80 | 67 | 55.67% | 45.58% | 194 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1142196' χ2 p-value for Mo17 x B73: '.2836204' Biased in favor of strain: '' |
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| GRMZM2G170890 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 4.6777 x 10-3 | 12 | 19 | 32 | 32 | 38.71% | 50.00% | 31 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009598' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G170870 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0908 x 10-2 | 174 | 136 | 159 | 109 | 56.13% | 40.67% | 310 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.030908' χ2 p-value for Mo17 x B73: '.0022563' Biased in favor of strain: 'B73' |
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| GRMZM2G170870 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.96 x 10-6 | 386 | 413 | 154 | 477 | 48.31% | 75.59% | 799 | 631 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.53e-28' χ2 p-value for Mo17 x B73: '1.96e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G170851 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.919197 x 10-1 | 41 | 46 | 25 | 36 | 47.13% | 59.02% | 87 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5919197' χ2 p-value for Mo17 x B73: '.159011' Biased in favor of strain: '' |
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| GRMZM2G170851 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.916947 x 10-1 | 60 | 40 | 17 | 49 | 60.00% | 74.24% | 100 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572839' χ2 p-value for Mo17 x B73: '.1916947' Biased in favor of strain: '' |
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| GRMZM2G170812 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 48 | 42 | 75 | 55 | 53.33% | 42.31% | 90 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.0794106' Biased in favor of strain: '' |
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| GRMZM2G170812 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.6576 x 10-3 | 12 | 51 | 15 | 65 | 19.05% | 81.25% | 63 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.08e-15' χ2 p-value for Mo17 x B73: '.0056576' Biased in favor of strain: 'Mo17' |
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| GRMZM2G170805 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 3 | 3 | 100.00% | 50.00% | 9 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G170805 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 10 | 6 | 8 | 4 | 62.50% | 33.33% | 16 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G170727 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.235 x 10-4 | 72 | 34 | 78 | 28 | 67.92% | 26.42% | 106 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002235' χ2 p-value for Mo17 x B73: '1.20e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G170727 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39071 x 10-2 | 34 | 6 | 36 | 37 | 85.00% | 50.68% | 40 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0139071' χ2 p-value for Mo17 x B73: '.003772' Biased in favor of strain: '' |
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| GRMZM2G170699 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 7 | 0 | 100.00% | 0.00% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G170699 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 1 | 2 | 33.33% | 66.67% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G170646 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.73 x 10-9 | 297 | 171 | 376 | 151 | 63.46% | 28.65% | 468 | 527 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.73e-09' χ2 p-value for Mo17 x B73: '1.11e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G170646 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8 x 10-15 | 59 | 148 | 45 | 295 | 28.50% | 86.76% | 207 | 340 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.35e-31' χ2 p-value for Mo17 x B73: '3.80e-15' Biased in favor of strain: 'Mo17' |