Displaying data sets 110701 - 110800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G30032 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30032 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30032 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G30032 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30032 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30032 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.520195'
Avg. expression score for this sample: '1741.25'
Avg. expression score in LCM sample: '209.974'
Tissue used: 'pure endosperm, no chalazal'
AT2G30020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '599.761'
Avg. embryo expression (LCM): '235.021'
AT2G30020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.77157 x 10-1 6 1 2 12 85.71% 85.71% 7 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.520195'
Avg. expression score for this sample: '2848.38'
Avg. expression score in LCM sample: '209.974'
Tissue used: 'full endosperm'
AT2G30020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30010 TBL45 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.46 x 10-4 1265 4 99.68% 1269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30010 TBL45 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.53 x 10-4 1967 9 99.54% 1976 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30010 TBL45 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.3 x 10-4 122 59 13 26 67.40% 66.67% 181 39 TAIR8 Avg. embryo expression (dissected): '136.569'
Avg. embryo expression (LCM): '228.654'
AT2G30010 TBL45 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 237 2 2 145 99.16% 98.64% 239 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '149.524'
Avg. expression score in LCM sample: '18.1078'
Tissue used: 'pure endosperm, no chalazal'
AT2G30010 TBL45 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0754 x 10-1 201 0 100.00% 201 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30010 TBL45 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 648 16 12 1026 97.59% 98.84% 664 1038 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '518.817'
Avg. expression score in LCM sample: '18.1078'
Tissue used: 'full endosperm'
AT2G30000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.07855 x 10-1 56 40 31 139 58.33% 81.76% 96 170 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.150798'
Avg. expression score for this sample: '86.3049'
Avg. expression score in LCM sample: '41.3452'
Tissue used: 'full endosperm'
AT2G30000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.36699 x 10-1 137 135 22 23 50.37% 51.11% 272 45 TAIR8 Avg. embryo expression (dissected): '294.977'
Avg. embryo expression (LCM): '257.062'
AT2G30000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.24906 x 10-1 138 74 65.09% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.715 x 10-3 31 2 93.94% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.25103 x 10-1 71 36 23 57 66.36% 71.25% 107 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.150798'
Avg. expression score for this sample: '117.336'
Avg. expression score in LCM sample: '41.3452'
Tissue used: 'pure endosperm, no chalazal'
AT2G30000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.36434 x 10-1 203 77 72.50% 280 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29995 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 53 0 100.00% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29995 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.57 x 10-4 14 0 0 21 100.00% 100.00% 14 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-33'
Avg. expression score for this sample: '19.9051'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29995 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29995 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-29 48 0 0 203 100.00% 100.00% 48 203 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-33'
Avg. expression score for this sample: '94.6658'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29995 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 98 0 100.00% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29995 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 59 0 100.00% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29990 NDA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-5 136 13 91.28% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29990 NDA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.89414 x 10-1 20 35 5 8 36.36% 61.54% 55 13 TAIR8 Avg. embryo expression (dissected): '37.8923'
Avg. embryo expression (LCM): '28.1312'
AT2G29990 NDA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.74077 x 10-1 32 30 11 39 51.61% 78.00% 62 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.064715'
Avg. expression score for this sample: '35.1685'
Avg. expression score in LCM sample: '28.705'
Tissue used: 'pure endosperm, no chalazal'
AT2G29990 NDA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0622 x 10-2 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29990 NDA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.209 x 10-3 56 14 18 81 80.00% 81.82% 70 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.064715'
Avg. expression score for this sample: '38.9857'
Avg. expression score in LCM sample: '28.705'
Tissue used: 'full endosperm'
AT2G29990 NDA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5 x 10-9 73 0 100.00% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29980 FAD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29980 FAD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '420.304'
Avg. expression score in LCM sample: '481.518'
Tissue used: 'full endosperm'
AT2G29980 FAD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '686.124'
Avg. embryo expression (LCM): '533.915'
AT2G29980 FAD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29980 FAD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29980 FAD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '305.476'
Avg. expression score in LCM sample: '481.518'
Tissue used: 'pure endosperm, no chalazal'
AT2G29970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 3 2 5 75.00% 71.43% 12 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.036775'
Avg. expression score for this sample: '28.1538'
Avg. expression score in LCM sample: '12.6255'
Tissue used: 'pure endosperm, no chalazal'
AT2G29970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 8 2 0 1 80.00% 100.00% 10 1 TAIR8 Avg. embryo expression (dissected): '33.2532'
Avg. embryo expression (LCM): '20.4705'
AT2G29970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7517 x 10-2 58 12 15 41 82.86% 73.21% 70 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.036775'
Avg. expression score for this sample: '80.5978'
Avg. expression score in LCM sample: '12.6255'
Tissue used: 'full endosperm'
AT2G29970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9964 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.615 x 10-3 42 2 95.45% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.15924 x 10-1 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29960 CYP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29960 CYP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29960 CYP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '342.341'
Avg. embryo expression (LCM): '230.475'
AT2G29960 CYP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '378.157'
Avg. expression score in LCM sample: '218.352'
Tissue used: 'pure endosperm, no chalazal'
AT2G29960 CYP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29960 CYP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '706.783'
Avg. expression score in LCM sample: '218.352'
Tissue used: 'full endosperm'
AT2G29950 ELF4-L1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8 x 10-6 20 0 0 28 100.00% 100.00% 20 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '14.5608'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29950 ELF4-L1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 4 0 3 0.00% 100.00% 4 3 TAIR8 Avg. embryo expression (dissected): '3.11783'
Avg. embryo expression (LCM): '1.48191'
AT2G29950 ELF4-L1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29950 ELF4-L1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.5139 x 10-2 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29950 ELF4-L1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-06'
Avg. expression score for this sample: '2.43737'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29950 ELF4-L1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29940 ABCG31 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 297 88 77.14% 385 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29940 ABCG31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.87 x 10-4 55 12 6 52 82.09% 89.66% 67 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.6527'
Avg. expression score in LCM sample: '8.62768'
Tissue used: 'pure endosperm, no chalazal'
AT2G29940 ABCG31 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 3 2 0 6 60.00% 100.00% 5 6 TAIR8 Avg. embryo expression (dissected): '2.41029'
Avg. embryo expression (LCM): '0'
AT2G29940 ABCG31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 803 7 13 767 99.14% 98.33% 810 780 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '212.02'
Avg. expression score in LCM sample: '8.62768'
Tissue used: 'full endosperm'
AT2G29940 ABCG31 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.67267 x 10-1 113 0 100.00% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29940 ABCG31 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.29 x 10-4 1008 50 95.27% 1058 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.357165'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G29920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.08259 x 10-1 31 33 20 67 48.44% 77.01% 64 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.613597'
Avg. expression score for this sample: '42.2884'
Avg. expression score in LCM sample: '24.8248'
Tissue used: 'pure endosperm, no chalazal'
AT2G29910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.71159 x 10-1 23 26 10 16 46.94% 61.54% 49 26 TAIR8 Avg. embryo expression (dissected): '37.7601'
Avg. embryo expression (LCM): '27.2647'
AT2G29910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.69433 x 10-1 76 36 49 127 67.86% 72.16% 112 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.613597'
Avg. expression score for this sample: '54.1552'
Avg. expression score in LCM sample: '24.8248'
Tissue used: 'full endosperm'
AT2G29910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.5442 x 10-2 23 3 88.46% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-8 188 26 87.85% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-8 94 7 93.07% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29900 PS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29900 PS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29900 PS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '213.777'
Avg. embryo expression (LCM): '130.232'
AT2G29900 PS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '330.526'
Avg. expression score in LCM sample: '92.7291'
Tissue used: 'pure endosperm, no chalazal'
AT2G29900 PS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29900 PS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '218.33'
Avg. expression score in LCM sample: '92.7291'
Tissue used: 'full endosperm'
AT2G29890 VLN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.13094 x 10-1 16 7 6 21 69.57% 77.78% 23 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232829'
Avg. expression score for this sample: '68.5915'
Avg. expression score in LCM sample: '96.6682'
Tissue used: 'full endosperm'
AT2G29890 VLN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21257 x 10-1 14 6 6 7 70.00% 53.85% 20 13 TAIR8 Avg. embryo expression (dissected): '73.4982'
Avg. embryo expression (LCM): '84.2806'
AT2G29890 VLN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29890 VLN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.52967 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29890 VLN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.82283 x 10-1 10 4 3 18 71.43% 85.71% 14 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232829'
Avg. expression score for this sample: '68.0263'
Avg. expression score in LCM sample: '96.6682'
Tissue used: 'pure endosperm, no chalazal'
AT2G29890 VLN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2474 x 10-2 17 15 53.12% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G29880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.688595'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G29880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G29880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.641021'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'