Displaying data sets 110601 - 110700 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G30190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G30180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30170 PBCP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5599 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30170 PBCP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 6 8 17 70.00% 68.00% 20 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835369'
Avg. expression score for this sample: '54.5499'
Avg. expression score in LCM sample: '22.6495'
Tissue used: 'full endosperm'
AT2G30170 PBCP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30170 PBCP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 2 0 100.00% 0.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.835369'
Avg. expression score for this sample: '27.374'
Avg. expression score in LCM sample: '22.6495'
Tissue used: 'pure endosperm, no chalazal'
AT2G30170 PBCP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 1 2 37.50% 66.67% 8 3 TAIR8 Avg. embryo expression (dissected): '49.5349'
Avg. embryo expression (LCM): '49.6064'
AT2G30170 PBCP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.61 x 10-4 77 8 90.59% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.84911 x 10-1 71 64 12 23 52.59% 65.71% 135 35 TAIR8 Avg. embryo expression (dissected): '83.0826'
Avg. embryo expression (LCM): '119.156'
AT2G30160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3589 x 10-2 102 22 82.26% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.15972 x 10-1 80 29 37 57 73.39% 60.64% 109 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.082095'
Avg. expression score for this sample: '58.8575'
Avg. expression score in LCM sample: '37.6561'
Tissue used: 'pure endosperm, no chalazal'
AT2G30160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2398 x 10-2 80 30 18 82 72.73% 82.00% 110 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.082095'
Avg. expression score for this sample: '50.9341'
Avg. expression score in LCM sample: '37.6561'
Tissue used: 'full endosperm'
AT2G30160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.73308 x 10-1 28 15 65.12% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.63151'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.80493'
Avg. embryo expression (LCM): '0'
AT2G30150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.7099'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30140 UGT87A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30140 UGT87A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '78.639'
Avg. expression score in LCM sample: '16.9467'
Tissue used: 'pure endosperm, no chalazal'
AT2G30140 UGT87A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '128.722'
Avg. expression score in LCM sample: '16.9467'
Tissue used: 'full endosperm'
AT2G30140 UGT87A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30140 UGT87A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30140 UGT87A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '180.598'
Avg. embryo expression (LCM): '98.1578'
AT2G30130 ASL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '80.1943'
Avg. embryo expression (LCM): '55.0568'
AT2G30130 ASL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30130 ASL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.69061'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30130 ASL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30130 ASL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30130 ASL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.31863'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.66634 x 10-1 22 10 9 31 68.75% 77.50% 32 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.530753'
Avg. expression score for this sample: '131.841'
Avg. expression score in LCM sample: '68.7862'
Tissue used: 'full endosperm'
AT2G30120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.85081 x 10-1 30 6 83.33% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 6 1 1 50.00% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '97.6866'
Avg. embryo expression (LCM): '77.3859'
AT2G30120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6014 x 10-2 44 6 88.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 5 3 10 50.00% 76.92% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.530753'
Avg. expression score for this sample: '125.88'
Avg. expression score in LCM sample: '68.7862'
Tissue used: 'pure endosperm, no chalazal'
AT2G30115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.45955'
Avg. expression score in LCM sample: '6.96681'
Tissue used: 'pure endosperm, no chalazal'
AT2G30115 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2619 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30115 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.40894'
Avg. expression score in LCM sample: '6.96681'
Tissue used: 'full endosperm'
AT2G30115 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G30115 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17647 x 10-1 28 1 96.55% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30110 UBA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.09 x 10-4 2160 1114 65.97% 3274 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30110 UBA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.1987 x 10-1 227 193 49 49 54.05% 50.00% 420 98 TAIR8 Avg. embryo expression (dissected): '561.95'
Avg. embryo expression (LCM): '530.587'
AT2G30110 UBA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-25 1578 289 84.52% 1867 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30110 UBA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.96037 x 10-1 171 63 113 195 73.08% 63.31% 234 308 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005392'
Avg. expression score for this sample: '366.284'
Avg. expression score in LCM sample: '655.086'
Tissue used: 'pure endosperm, no chalazal'
AT2G30110 UBA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.214 x 10-3 534 151 279 563 77.96% 66.86% 685 842 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005392'
Avg. expression score for this sample: '527.558'
Avg. expression score in LCM sample: '655.086'
Tissue used: 'full endosperm'
AT2G30110 UBA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.016 x 10-2 111 28 79.86% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.44707 x 10-1 19 2 90.48% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-5 39 7 8 79 84.78% 90.80% 46 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000046'
Avg. expression score for this sample: '78.0336'
Avg. expression score in LCM sample: '11.7877'
Tissue used: 'full endosperm'
AT2G30100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.50126 x 10-1 18 21 5 11 46.15% 68.75% 39 16 TAIR8 Avg. embryo expression (dissected): '57.0535'
Avg. embryo expression (LCM): '49.4934'
AT2G30100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.46369 x 10-1 101 20 83.47% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.78261 x 10-1 20 5 7 18 80.00% 72.00% 25 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000046'
Avg. expression score for this sample: '37.5066'
Avg. expression score in LCM sample: '11.7877'
Tissue used: 'pure endosperm, no chalazal'
AT2G30100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1087 x 10-2 131 8 94.24% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 373 47 88.81% 420 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.221429'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.624968'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1158 x 10-2 168 188 47.19% 356 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G30080 ZIP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.8272'
Avg. embryo expression (LCM): '4.9104'
AT2G30080 ZIP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.58659 x 10-1 23 0 100.00% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30080 ZIP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020994'
Avg. expression score for this sample: '57.5317'
Avg. expression score in LCM sample: '1.4404'
Tissue used: 'pure endosperm, no chalazal'
AT2G30080 ZIP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.003 x 10-3 81 0 100.00% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30080 ZIP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30080 ZIP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0994 x 10-2 18 1 4 22 94.74% 84.62% 19 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020994'
Avg. expression score for this sample: '160.29'
Avg. expression score in LCM sample: '1.4404'
Tissue used: 'full endosperm'
AT2G30070 KT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 420 20 23 305 95.45% 92.99% 440 328 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '294.985'
Avg. expression score in LCM sample: '3.68918'
Tissue used: 'full endosperm'
AT2G30070 KT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.1212 x 10-2 43 7 86.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30070 KT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.4 x 10-6 239 1 99.58% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30070 KT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1069 x 10-1 29 12 5 5 70.73% 50.00% 41 10 TAIR8 Avg. embryo expression (dissected): '77.3717'
Avg. embryo expression (LCM): '29.902'
AT2G30070 KT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-6 424 6 98.60% 430 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30070 KT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.339 x 10-3 50 6 10 36 89.29% 78.26% 56 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '96.9493'
Avg. expression score in LCM sample: '3.68918'
Tissue used: 'pure endosperm, no chalazal'
AT2G30060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.08961 x 10-1 39 32 27 72 54.93% 72.73% 71 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.332192'
Avg. expression score for this sample: '184.127'
Avg. expression score in LCM sample: '143.363'
Tissue used: 'pure endosperm, no chalazal'
AT2G30060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-10 169 27 86.22% 196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.9593 x 10-2 68 24 73.91% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.57202 x 10-1 162 30 155 162 84.38% 51.10% 192 317 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.332192'
Avg. expression score for this sample: '305.512'
Avg. expression score in LCM sample: '143.363'
Tissue used: 'full endosperm'
AT2G30060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.0655 x 10-2 34 72 4 12 32.08% 75.00% 106 16 TAIR8 Avg. embryo expression (dissected): '176.522'
Avg. embryo expression (LCM): '364.174'
AT2G30060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.12546 x 10-1 131 95 57.96% 226 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-9 3 49 5.77% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 4 0 0 0 100.00% 4 0 TAIR8 Avg. embryo expression (dissected): '715.251'
Avg. embryo expression (LCM): '568.527'
AT2G30050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-12 86 1 98.85% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.219758'
Avg. expression score for this sample: '672.72'
Avg. expression score in LCM sample: '401.062'
Tissue used: 'pure endosperm, no chalazal'
AT2G30050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.12255 x 10-1 33 1 29 3 97.06% 9.38% 34 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.219758'
Avg. expression score for this sample: '524.353'
Avg. expression score in LCM sample: '401.062'
Tissue used: 'full endosperm'
AT2G30050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30040 MAPKKK14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30040 MAPKKK14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.5447'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G30040 MAPKKK14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.52078'
Avg. embryo expression (LCM): '0'
AT2G30040 MAPKKK14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G30040 MAPKKK14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.79173'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G30040 MAPKKK14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'