| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G30630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.542851' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G30630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '3.26867' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G30630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.94288 x 10-1 | 95 | 22 | 81.20% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.059 x 10-3 | 154 | 30 | 66 | 155 | 83.70% | 70.14% | 184 | 221 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000097' Avg. expression score for this sample: '165.483' Avg. expression score in LCM sample: '114.203' Tissue used: 'full endosperm' |
|||||
| AT2G30620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.78764 x 10-1 | 13 | 7 | 65.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.602 x 10-3 | 111 | 51 | 22 | 15 | 68.52% | 40.54% | 162 | 37 | TAIR8 |
Avg. embryo expression (dissected): '166.286' Avg. embryo expression (LCM): '222.073' |
||||
| AT2G30620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.5 x 10-7 | 199 | 17 | 92.13% | 216 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0177 x 10-2 | 104 | 20 | 19 | 40 | 83.87% | 67.80% | 124 | 59 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000097' Avg. expression score for this sample: '111.037' Avg. expression score in LCM sample: '114.203' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G30615 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.79311' Avg. expression score in LCM sample: '2.57214' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G30615 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '2.19775' |
||||||
| AT2G30615 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.58154' Avg. expression score in LCM sample: '2.57214' Tissue used: 'full endosperm' |
||||||
| AT2G30615 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30615 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30615 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.0 x 10-30 | 279 | 4 | 98.59% | 283 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.0 x 10-13 | 564 | 88 | 86.50% | 652 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.7 x 10-5 | 289 | 161 | 96 | 496 | 64.22% | 83.78% | 450 | 592 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00004' Avg. expression score for this sample: '210.799' Avg. expression score in LCM sample: '130.371' Tissue used: 'full endosperm' |
|||||
| AT2G30600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.67238 x 10-1 | 304 | 164 | 102 | 312 | 64.96% | 75.36% | 468 | 414 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00004' Avg. expression score for this sample: '211.894' Avg. expression score in LCM sample: '130.371' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G30600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.47144 x 10-1 | 158 | 172 | 35 | 79 | 47.88% | 69.30% | 330 | 114 | TAIR8 |
Avg. embryo expression (dissected): '165.505' Avg. embryo expression (LCM): '68.4066' |
||||
| AT2G30600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.5211 x 10-2 | 120 | 31 | 79.47% | 151 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30590 | WRKY21 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.2 x 10-16 | 202 | 134 | 60.12% | 336 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30590 | WRKY21 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.0 x 10-30 | 1237 | 378 | 163 | 971 | 76.59% | 85.63% | 1615 | 1134 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1040.92' Avg. expression score in LCM sample: '705.03' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G30590 | WRKY21 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.37369 x 10-1 | 148 | 33 | 81.77% | 181 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30590 | WRKY21 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 1831 | 545 | 251 | 1314 | 77.06% | 83.96% | 2376 | 1565 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1746.56' Avg. expression score in LCM sample: '705.03' Tissue used: 'full endosperm' |
||||
| AT2G30590 | WRKY21 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.622 x 10-3 | 173 | 101 | 22 | 31 | 63.14% | 58.49% | 274 | 53 | TAIR8 |
Avg. embryo expression (dissected): '191.822' Avg. embryo expression (LCM): '246.412' |
|||
| AT2G30590 | WRKY21 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.41021 x 10-1 | 56 | 11 | 83.58% | 67 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30580 | DRIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.4787 x 10-1 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30580 | DRIP2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '139.037' Avg. embryo expression (LCM): '102.453' |
||||
| AT2G30580 | DRIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30580 | DRIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.98246 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30580 | DRIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.224503' Avg. expression score for this sample: '95.6992' Avg. expression score in LCM sample: '29.4252' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G30580 | DRIP2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.89847 x 10-1 | 4 | 0 | 2 | 9 | 100.00% | 81.82% | 4 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.224503' Avg. expression score for this sample: '182.782' Avg. expression score in LCM sample: '29.4252' Tissue used: 'full endosperm' |
||||
| AT2G30575 | LGT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4 x 10-9 | 368 | 180 | 113 | 633 | 67.15% | 84.85% | 548 | 746 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.2e-12' Avg. expression score for this sample: '287.745' Avg. expression score in LCM sample: '191.661' Tissue used: 'full endosperm' |
||||
| AT2G30575 | LGT5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.53348 x 10-1 | 132 | 36 | 78.57% | 168 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30575 | LGT5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.36296 x 10-1 | 439 | 594 | 330 | 525 | 42.50% | 61.40% | 1033 | 855 | TAIR8 |
Avg. embryo expression (dissected): '940.666' Avg. embryo expression (LCM): '266.732' |
|||
| AT2G30575 | LGT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.0 x 10-14 | 833 | 152 | 84.57% | 985 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30575 | LGT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.9 x 10-5 | 822 | 468 | 338 | 1231 | 63.72% | 78.46% | 1290 | 1569 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.2e-12' Avg. expression score for this sample: '753.276' Avg. expression score in LCM sample: '191.661' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G30575 | LGT5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-19 | 607 | 79 | 88.48% | 686 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30570 | PSBW | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.50691 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30570 | PSBW | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 16 | 1 | 8 | 1 | 94.12% | 11.11% | 17 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.849027' Avg. expression score for this sample: '2644.57' Avg. expression score in LCM sample: '702.487' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G30570 | PSBW | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 13 | 13 | 6 | 6 | 50.00% | 50.00% | 26 | 12 | TAIR8 |
Avg. embryo expression (dissected): '5382.79' Avg. embryo expression (LCM): '2481.79' |
|||
| AT2G30570 | PSBW | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 13 | 5 | 8 | 9 | 72.22% | 52.94% | 18 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.849027' Avg. expression score for this sample: '2779.23' Avg. expression score in LCM sample: '702.487' Tissue used: 'full endosperm' |
||||
| AT2G30570 | PSBW | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30570 | PSBW | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.55116 x 10-1 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.25483 x 10-1 | 8 | 8 | 14 | 13 | 50.00% | 48.15% | 16 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00006' Avg. expression score for this sample: '16.2248' Avg. expression score in LCM sample: '8.58358' Tissue used: 'full endosperm' |
|||||
| AT2G30560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.61 x 10-4 | 7 | 33 | 2 | 5 | 17.50% | 71.43% | 40 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00006' Avg. expression score for this sample: '30.5181' Avg. expression score in LCM sample: '8.58358' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G30560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Avg. embryo expression (dissected): '14.4107' Avg. embryo expression (LCM): '0' |
|||||
| AT2G30560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.0873 x 10-1 | 7 | 5 | 58.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.73626 x 10-1 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.40827 x 10-1 | 28 | 0 | 100.00% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.84541 x 10-1 | 5 | 2 | 0 | 7 | 71.43% | 100.00% | 7 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01482' Avg. expression score for this sample: '40.5847' Avg. expression score in LCM sample: '.925969' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G30550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4884 x 10-2 | 120 | 1 | 99.17% | 121 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.9403 x 10-2 | 11 | 2 | 0 | 14 | 84.62% | 100.00% | 13 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01482' Avg. expression score for this sample: '67.0234' Avg. expression score in LCM sample: '.925969' Tissue used: 'full endosperm' |
|||||
| AT2G30550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '11.1571' Avg. embryo expression (LCM): '3.16476' |
|||||
| AT2G30540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G30540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G30540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G30540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '82.3201' Avg. expression score in LCM sample: '40.2429' Tissue used: 'full endosperm' |
|||||||
| AT2G30530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '63.5233' Avg. embryo expression (LCM): '42.9754' |
||||||
| AT2G30530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '56.0861' Avg. expression score in LCM sample: '40.2429' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G30520 | RPT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.129306' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G30520 | RPT2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.292809' Avg. embryo expression (LCM): '0' |
||||
| AT2G30520 | RPT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.091239' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G30520 | RPT2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30520 | RPT2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30520 | RPT2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30505 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-7 | 48 | 0 | 100.00% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30505 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.78958 x 10-1 | 33 | 10 | 76.74% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30505 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.71018 x 10-1 | 45 | 44 | 22 | 124 | 50.56% | 84.93% | 89 | 146 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.260594' Avg. expression score for this sample: '180.732' Avg. expression score in LCM sample: '36.054' Tissue used: 'full endosperm' |
|||||
| AT2G30505 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.87443 x 10-1 | 18 | 27 | 12 | 69 | 40.00% | 85.19% | 45 | 81 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.260594' Avg. expression score for this sample: '147.161' Avg. expression score in LCM sample: '36.054' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G30505 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.50126 x 10-1 | 18 | 23 | 3 | 11 | 43.90% | 78.57% | 41 | 14 | TAIR8 |
Avg. embryo expression (dissected): '142.312' Avg. embryo expression (LCM): '78.1897' |
||||
| AT2G30505 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.35848 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30500 | NET4B | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.4542 x 10-2 | 185 | 60 | 75.51% | 245 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30500 | NET4B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.14172 x 10-1 | 1328 | 455 | 534 | 744 | 74.48% | 58.22% | 1783 | 1278 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008087' Avg. expression score for this sample: '731.969' Avg. expression score in LCM sample: '20.1508' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G30500 | NET4B | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-27 | 687 | 110 | 86.20% | 797 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30500 | NET4B | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.298 x 10-3 | 1265 | 468 | 744 | 1506 | 72.99% | 66.93% | 1733 | 2250 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008087' Avg. expression score for this sample: '746.452' Avg. expression score in LCM sample: '20.1508' Tissue used: 'full endosperm' |
||||
| AT2G30500 | NET4B | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.04 x 10-3 | 1777 | 1422 | 474 | 363 | 55.55% | 43.37% | 3199 | 837 | TAIR8 |
Avg. embryo expression (dissected): '1419.76' Avg. embryo expression (LCM): '225.213' |
|||
| AT2G30500 | NET4B | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.95527 x 10-1 | 232 | 89 | 72.27% | 321 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30490 | C4H | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.6 x 10-11 | 252 | 8 | 96.92% | 260 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30490 | C4H | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.53583 x 10-1 | 157 | 201 | 41 | 56 | 43.85% | 57.73% | 358 | 97 | TAIR8 |
Avg. embryo expression (dissected): '236.243' Avg. embryo expression (LCM): '129.768' |
|||
| AT2G30490 | C4H | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1070 | 31 | 97.18% | 1101 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30490 | C4H | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.52 x 10-4 | 126 | 9 | 93.33% | 135 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G30490 | C4H | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.404 x 10-3 | 126 | 37 | 15 | 70 | 77.30% | 82.35% | 163 | 85 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-13' Avg. expression score for this sample: '89.6184' Avg. expression score in LCM sample: '26.1329' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G30490 | C4H | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.5 x 10-11 | 232 | 77 | 31 | 300 | 75.08% | 90.63% | 309 | 331 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-13' Avg. expression score for this sample: '247.864' Avg. expression score in LCM sample: '26.1329' Tissue used: 'full endosperm' |
||||
| AT2G30480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.7123' Avg. expression score in LCM sample: '1.79315' Tissue used: 'full endosperm' |
|||||
| AT2G30480 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G30480 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.57057 x 10-1 | 12 | 3 | 1 | 1 | 80.00% | 50.00% | 15 | 2 | TAIR8 |
Avg. embryo expression (dissected): '22.6596' Avg. embryo expression (LCM): '14.2917' |
||||
| AT2G30480 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.10294 x 10-1 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G30480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.96958' Avg. expression score in LCM sample: '1.79315' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G30480 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |