Displaying data sets 10901 - 11000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G51370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51350 MOL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.48795'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'pure endosperm, no chalazal'
AT5G51350 MOL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.8805'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'full endosperm'
AT5G51350 MOL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '11.2391'
Avg. embryo expression (LCM): '22.9194'
AT5G51350 MOL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51350 MOL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51350 MOL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 52 28 20 47 65.00% 70.15% 80 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208527'
Avg. expression score for this sample: '252.317'
Avg. expression score in LCM sample: '187.325'
Tissue used: 'pure endosperm, no chalazal'
AT5G51340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.40032 x 10-1 107 45 31 95 70.39% 75.40% 152 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208527'
Avg. expression score for this sample: '296.661'
Avg. expression score in LCM sample: '187.325'
Tissue used: 'full endosperm'
AT5G51340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.90269 x 10-1 45 45 9 6 50.00% 40.00% 90 15 TAIR8 Avg. embryo expression (dissected): '377.748'
Avg. embryo expression (LCM): '300.163'
AT5G51340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.17665 x 10-1 13 7 65.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6645 x 10-2 37 7 84.09% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-6 67 3 95.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51330 SWI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.94403'
Avg. expression score in LCM sample: '1.48449'
Tissue used: 'pure endosperm, no chalazal'
AT5G51330 SWI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.0559'
Avg. expression score in LCM sample: '1.48449'
Tissue used: 'full endosperm'
AT5G51330 SWI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.87462'
Avg. embryo expression (LCM): '4.42062'
AT5G51330 SWI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51330 SWI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51330 SWI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.53849'
Avg. expression score in LCM sample: '2.93958'
Tissue used: 'pure endosperm, no chalazal'
AT5G51310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.75408'
Avg. expression score in LCM sample: '2.93958'
Tissue used: 'full endosperm'
AT5G51310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.71466'
Avg. embryo expression (LCM): '5.02343'
AT5G51310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.41168 x 10-1 78 37 32 100 67.83% 75.76% 115 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055836'
Avg. expression score for this sample: '1717.01'
Avg. expression score in LCM sample: '628.586'
Tissue used: 'pure endosperm, no chalazal'
AT5G51300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.19973 x 10-1 82 28 22 60 74.55% 73.17% 110 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055836'
Avg. expression score for this sample: '1233.97'
Avg. expression score in LCM sample: '628.586'
Tissue used: 'full endosperm'
AT5G51300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.71918 x 10-1 99 95 45 65 51.03% 59.09% 194 110 TAIR8 Avg. embryo expression (dissected): '2478.92'
Avg. embryo expression (LCM): '889.876'
AT5G51300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.90372 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.124 x 10-2 86 17 83.50% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-6 167 21 88.83% 188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51290 ACD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040291'
Avg. expression score for this sample: '20.2029'
Avg. expression score in LCM sample: '9.78881'
Tissue used: 'pure endosperm, no chalazal'
AT5G51290 ACD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8452 x 10-2 12 1 1 12 92.31% 92.31% 13 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040291'
Avg. expression score for this sample: '29.0828'
Avg. expression score in LCM sample: '9.78881'
Tissue used: 'full endosperm'
AT5G51290 ACD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '24.1352'
Avg. embryo expression (LCM): '18.4109'
AT5G51290 ACD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51290 ACD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.11469 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51290 ACD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.13043 x 10-1 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '155.075'
Avg. expression score in LCM sample: '147.258'
Tissue used: 'pure endosperm, no chalazal'
AT5G51280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '188.94'
Avg. expression score in LCM sample: '147.258'
Tissue used: 'full endosperm'
AT5G51280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '214.672'
Avg. embryo expression (LCM): '239.354'
AT5G51280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '5.8073'
Avg. expression score in LCM sample: '2.39576'
Tissue used: 'pure endosperm, no chalazal'
AT5G51270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '10.0937'
Avg. expression score in LCM sample: '2.39576'
Tissue used: 'full endosperm'
AT5G51270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '13.6189'
Avg. embryo expression (LCM): '12.2948'
AT5G51270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.7134'
Avg. expression score in LCM sample: '49.2233'
Tissue used: 'pure endosperm, no chalazal'
AT5G51260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '133.898'
Avg. expression score in LCM sample: '49.2233'
Tissue used: 'full endosperm'
AT5G51260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.1633'
Avg. embryo expression (LCM): '11.7423'
AT5G51260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.927359'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'pure endosperm, no chalazal'
AT5G51250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.956573'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'full endosperm'
AT5G51250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51230 EMF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '142.402'
Avg. expression score in LCM sample: '41.551'
Tissue used: 'pure endosperm, no chalazal'
AT5G51230 EMF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 6 6 17 62.50% 73.91% 16 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '99.6294'
Avg. expression score in LCM sample: '41.551'
Tissue used: 'full endosperm'
AT5G51230 EMF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Avg. embryo expression (dissected): '134.377'
Avg. embryo expression (LCM): '90.8613'
AT5G51230 EMF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51230 EMF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.45806 x 10-1 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51230 EMF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.35044 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240482'
Avg. expression score for this sample: '30.753'
Avg. expression score in LCM sample: '11.3027'
Tissue used: 'pure endosperm, no chalazal'
AT5G51220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.40482 x 10-1 4 0 7 0 100.00% 0.00% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240482'
Avg. expression score for this sample: '35.225'
Avg. expression score in LCM sample: '11.3027'
Tissue used: 'full endosperm'
AT5G51220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '42.8775'
Avg. embryo expression (LCM): '60.1054'
AT5G51220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.74725 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.282 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51210 OLEO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.2 x 10-7 10378 5721 6961 13047 64.46% 65.21% 16099 20008 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-28'
Avg. expression score for this sample: '21124.5'
Avg. expression score in LCM sample: '7075.89'
Tissue used: 'pure endosperm, no chalazal'
AT5G51210 OLEO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-30 6887 5258 3079 6353 56.71% 67.36% 12145 9432 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-28'
Avg. expression score for this sample: '11104.3'
Avg. expression score in LCM sample: '7075.89'
Tissue used: 'full endosperm'
AT5G51210 OLEO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.35535 x 10-1 13352 13878 7247 7913 49.03% 52.20% 27230 15160 TAIR8 Avg. embryo expression (dissected): '43142.5'
Avg. embryo expression (LCM): '10487.8'
AT5G51210 OLEO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3 x 10-9 2765 1290 68.19% 4055 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51210 OLEO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.5761 x 10-2 302 203 59.80% 505 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51210 OLEO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-24 611 628 49.31% 1239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51200 EMB3142 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.18019 x 10-1 23 14 16 26 62.16% 61.90% 37 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.366455'
Avg. expression score for this sample: '30.2742'
Avg. expression score in LCM sample: '54.6469'
Tissue used: 'pure endosperm, no chalazal'
AT5G51200 EMB3142 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.60085 x 10-1 63 21 33 88 75.00% 72.73% 84 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.366455'
Avg. expression score for this sample: '45.0796'
Avg. expression score in LCM sample: '54.6469'
Tissue used: 'full endosperm'
AT5G51200 EMB3142 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.39498 x 10-1 46 36 10 15 56.10% 60.00% 82 25 TAIR8 Avg. embryo expression (dissected): '74.6001'
Avg. embryo expression (LCM): '71.9606'
AT5G51200 EMB3142 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.65747 x 10-1 9 7 56.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51200 EMB3142 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.37729 x 10-1 95 48 66.43% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51200 EMB3142 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2145 x 10-2 127 29 81.41% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.903511'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51195 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51195 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51195 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51195 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.781 x 10-2 14 2 2 12 87.50% 85.71% 16 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00257'
Avg. expression score for this sample: '22.9438'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5593 x 10-2 46 3 12 30 93.88% 71.43% 49 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00257'
Avg. expression score for this sample: '74.7994'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'