Displaying data sets 1001 - 1100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G66190 FNR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.17816 x 10-1 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66190 FNR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.892 x 10-2 50 14 78.12% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.4261'
Avg. expression score in LCM sample: '21.6206'
Tissue used: 'pure endosperm, no chalazal'
AT5G66180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '84.958'
Avg. expression score in LCM sample: '21.6206'
Tissue used: 'full endosperm'
AT5G66180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '67.6706'
Avg. embryo expression (LCM): '71.2322'
AT5G66180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66170 STR18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5 x 10-5 74 5 4 18 93.67% 81.82% 79 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '90.5289'
Avg. expression score in LCM sample: '2.01361'
Tissue used: 'pure endosperm, no chalazal'
AT5G66170 STR18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 541 35 23 539 93.92% 95.91% 576 562 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '861.822'
Avg. expression score in LCM sample: '2.01361'
Tissue used: 'full endosperm'
AT5G66170 STR18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.24374 x 10-1 89 57 28 22 60.96% 44.00% 146 50 TAIR8 Avg. embryo expression (dissected): '231.943'
Avg. embryo expression (LCM): '108.23'
AT5G66170 STR18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.92 x 10-4 155 0 100.00% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66170 STR18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.029 x 10-3 117 16 87.97% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66170 STR18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.826 x 10-3 301 6 98.05% 307 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66160 RMR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.61916 x 10-1 283 113 110 225 71.46% 67.16% 396 335 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000109'
Avg. expression score for this sample: '320.582'
Avg. expression score in LCM sample: '136.382'
Tissue used: 'pure endosperm, no chalazal'
AT5G66160 RMR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-5 288 76 93 276 79.12% 74.80% 364 369 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000109'
Avg. expression score for this sample: '292.548'
Avg. expression score in LCM sample: '136.382'
Tissue used: 'full endosperm'
AT5G66160 RMR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.89866 x 10-1 135 128 32 45 51.33% 58.44% 263 77 TAIR8 Avg. embryo expression (dissected): '227.154'
Avg. embryo expression (LCM): '184.247'
AT5G66160 RMR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.11134 x 10-1 62 14 81.58% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66160 RMR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-10 433 289 59.97% 722 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66160 RMR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-8 364 60 85.85% 424 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 1 0 0 6 100.00% 100.00% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '27.7779'
Avg. expression score in LCM sample: '32.0415'
Tissue used: 'pure endosperm, no chalazal'
AT5G66150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 0 1 71.43% 100.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '26.8834'
Avg. expression score in LCM sample: '32.0415'
Tissue used: 'full endosperm'
AT5G66150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.9694'
Avg. embryo expression (LCM): '6.04068'
AT5G66150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 113 25 81.88% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 31 7 81.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66140 PAD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.85269 x 10-1 305 125 196 350 70.93% 64.10% 430 546 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.563213'
Avg. expression score for this sample: '430.22'
Avg. expression score in LCM sample: '300.043'
Tissue used: 'pure endosperm, no chalazal'
AT5G66140 PAD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.46937 x 10-1 287 142 99 232 66.90% 70.09% 429 331 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.563213'
Avg. expression score for this sample: '349.899'
Avg. expression score in LCM sample: '300.043'
Tissue used: 'full endosperm'
AT5G66140 PAD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.7913 262 258 93 101 50.38% 52.06% 520 194 TAIR8 Avg. embryo expression (dissected): '545.03'
Avg. embryo expression (LCM): '609.857'
AT5G66140 PAD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.5279 x 10-2 137 84 61.99% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66140 PAD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-12 212 28 88.33% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66140 PAD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-12 295 50 85.51% 345 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66130 ATRAD17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.40952 x 10-1 17 9 6 26 65.38% 81.25% 26 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.143587'
Avg. expression score for this sample: '52.771'
Avg. expression score in LCM sample: '23.1786'
Tissue used: 'pure endosperm, no chalazal'
AT5G66130 ATRAD17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.82058 x 10-1 36 18 8 40 66.67% 83.33% 54 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.143587'
Avg. expression score for this sample: '54.0331'
Avg. expression score in LCM sample: '23.1786'
Tissue used: 'full endosperm'
AT5G66130 ATRAD17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 23 26 6 8 46.94% 57.14% 49 14 TAIR8 Avg. embryo expression (dissected): '92.0137'
Avg. embryo expression (LCM): '49.2296'
AT5G66130 ATRAD17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.53841 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66130 ATRAD17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0535 57 9 86.36% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66130 ATRAD17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 38 13 74.51% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '129.836'
Avg. expression score in LCM sample: '57.8363'
Tissue used: 'pure endosperm, no chalazal'
AT5G66120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '114.944'
Avg. expression score in LCM sample: '57.8363'
Tissue used: 'full endosperm'
AT5G66120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '126.997'
Avg. embryo expression (LCM): '93.4609'
AT5G66120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66110 HIPP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.7294'
Avg. expression score in LCM sample: '21.3708'
Tissue used: 'pure endosperm, no chalazal'
AT5G66110 HIPP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.1439'
Avg. expression score in LCM sample: '21.3708'
Tissue used: 'full endosperm'
AT5G66110 HIPP27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '66.4814'
Avg. embryo expression (LCM): '0'
AT5G66110 HIPP27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66110 HIPP27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66110 HIPP27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66100 LARP1b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.20715 x 10-1 61 29 48 88 67.78% 64.71% 90 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.217086'
Avg. expression score for this sample: '394.358'
Avg. expression score in LCM sample: '134.31'
Tissue used: 'pure endosperm, no chalazal'
AT5G66100 LARP1b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.53378 x 10-1 135 78 101 158 63.38% 61.00% 213 259 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.217086'
Avg. expression score for this sample: '335.781'
Avg. expression score in LCM sample: '134.31'
Tissue used: 'full endosperm'
AT5G66100 LARP1b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 87 78 55 47 52.73% 46.08% 165 102 TAIR8 Avg. embryo expression (dissected): '689.386'
Avg. embryo expression (LCM): '269.934'
AT5G66100 LARP1b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.37204 x 10-1 28 20 58.33% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66100 LARP1b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.27948 x 10-1 144 70 67.29% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66100 LARP1b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-9 194 39 83.26% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.89358 x 10-1 258 114 110 214 69.35% 66.05% 372 324 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110448'
Avg. expression score for this sample: '1489.94'
Avg. expression score in LCM sample: '117.275'
Tissue used: 'pure endosperm, no chalazal'
AT5G66090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6034 x 10-2 216 74 77 176 74.48% 69.57% 290 253 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110448'
Avg. expression score for this sample: '450.64'
Avg. expression score in LCM sample: '117.275'
Tissue used: 'full endosperm'
AT5G66090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.75711 x 10-1 528 511 138 131 50.82% 48.70% 1039 269 TAIR8 Avg. embryo expression (dissected): '3744.09'
Avg. embryo expression (LCM): '1531.08'
AT5G66090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.62729 x 10-1 37 20 64.91% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.88293 x 10-1 45 18 71.43% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-7 119 13 90.15% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180344'
Avg. expression score for this sample: '.306413'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G66080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.50627 x 10-1 32 9 1 6 78.05% 85.71% 41 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180344'
Avg. expression score for this sample: '9.94229'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G66080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 5 0 0 50.00% 10 0 TAIR8 Avg. embryo expression (dissected): '1.99012'
Avg. embryo expression (LCM): '0'
AT5G66080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.88235 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.1 x 10-5 2 10 16.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3832 x 10-2 8 10 44.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 0 0 62.50% 8 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035211'
Avg. expression score for this sample: '46.6904'
Avg. expression score in LCM sample: '14.1394'
Tissue used: 'pure endosperm, no chalazal'
AT5G66070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1481 x 10-2 18 0 2 14 100.00% 87.50% 18 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035211'
Avg. expression score for this sample: '143.869'
Avg. expression score in LCM sample: '14.1394'
Tissue used: 'full endosperm'
AT5G66070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 1 1 50.00% 50.00% 4 2 TAIR8 Avg. embryo expression (dissected): '98.2228'
Avg. embryo expression (LCM): '16.1001'
AT5G66070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.52541 x 10-1 16 4 80.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9294 x 10-2 58 1 98.31% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.46 x 10-4 545 126 224 414 81.22% 64.89% 671 638 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.9e-08'
Avg. expression score for this sample: '519.443'
Avg. expression score in LCM sample: '163.926'
Tissue used: 'pure endosperm, no chalazal'
AT5G66060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7 x 10-5 615 166 268 568 78.75% 67.94% 781 836 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.9e-08'
Avg. expression score for this sample: '420.302'
Avg. expression score in LCM sample: '163.926'
Tissue used: 'full endosperm'
AT5G66060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.438 x 10-3 327 148 128 61 68.84% 32.28% 475 189 TAIR8 Avg. embryo expression (dissected): '442.923'
Avg. embryo expression (LCM): '141.636'
AT5G66060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2631 x 10-2 125 64 66.14% 189 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.8502 x 10-2 477 140 77.31% 617 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1324 51 96.29% 1375 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66055 AKRP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.51833 x 10-1 200 38 77 69 84.03% 47.26% 238 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.126401'
Avg. expression score for this sample: '69.1525'
Avg. expression score in LCM sample: '48.6942'
Tissue used: 'pure endosperm, no chalazal'
AT5G66055 AKRP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.50868 x 10-1 236 43 108 121 84.59% 52.84% 279 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.126401'
Avg. expression score for this sample: '60.0091'
Avg. expression score in LCM sample: '48.6942'
Tissue used: 'full endosperm'
AT5G66055 AKRP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.21 x 10-4 267 132 48 32 66.92% 40.00% 399 80 TAIR8 Avg. embryo expression (dissected): '131.563'
Avg. embryo expression (LCM): '113.818'
AT5G66055 AKRP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.318 x 10-3 20 21 48.78% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66055 AKRP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.14685 x 10-1 84 34 71.19% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66055 AKRP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-10 145 12 92.36% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66053 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '98.9112'
Avg. expression score in LCM sample: '10.0681'
Tissue used: 'pure endosperm, no chalazal'
AT5G66053 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.8156'
Avg. expression score in LCM sample: '10.0681'
Tissue used: 'full endosperm'
AT5G66053 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '163.212'
Avg. embryo expression (LCM): '17.2052'
AT5G66053 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66053 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66053 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '32.996'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'pure endosperm, no chalazal'
AT5G66052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '51.3324'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'full endosperm'
AT5G66052 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '38.2391'
Avg. embryo expression (LCM): '21.4626'
AT5G66052 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66052 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66052 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G66050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.71289 x 10-1 104 43 69 129 70.75% 65.15% 147 198 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.322864'
Avg. expression score for this sample: '300.249'
Avg. expression score in LCM sample: '88.2316'
Tissue used: 'pure endosperm, no chalazal'
AT5G66050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7326 x 10-1 106 21 28 30 83.46% 51.72% 127 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.322864'
Avg. expression score for this sample: '270.659'
Avg. expression score in LCM sample: '88.2316'
Tissue used: 'full endosperm'