Displaying data sets 109701 - 109800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G31450 ATNTH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 0 1 60.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '21.2803'
Avg. embryo expression (LCM): '21.2742'
AT2G31450 ATNTH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 3 50.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.9347'
Avg. expression score in LCM sample: '10.8177'
Tissue used: 'full endosperm'
AT2G31450 ATNTH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31450 ATNTH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6128 x 10-2 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33213 x 10-1 3 9 4 3 25.00% 42.86% 12 7 TAIR8 Avg. embryo expression (dissected): '334.293'
Avg. embryo expression (LCM): '245.457'
AT2G31440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.23097 x 10-1 6 2 3 11 75.00% 78.57% 8 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.841255'
Avg. expression score for this sample: '190.925'
Avg. expression score in LCM sample: '159.369'
Tissue used: 'pure endosperm, no chalazal'
AT2G31440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.89054 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5017 x 10-1 16 8 7 2 66.67% 22.22% 24 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.841255'
Avg. expression score for this sample: '276'
Avg. expression score in LCM sample: '159.369'
Tissue used: 'full endosperm'
AT2G31440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31432 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31432 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G31432 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G31432 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31432 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31432 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G31430 PMEI5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.585406'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G31430 PMEI5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.836449'
Avg. embryo expression (LCM): '0'
AT2G31430 PMEI5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.01645'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G31430 PMEI5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31430 PMEI5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31430 PMEI5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31425 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31425 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31425 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G31425 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.709823'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G31425 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31425 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.492993'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G31420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.808769'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G31420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G31420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G31420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3926 x 10-2 329 112 74.60% 441 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.04899 x 10-1 174 103 74 147 62.82% 66.52% 277 221 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273693'
Avg. expression score for this sample: '479.976'
Avg. expression score in LCM sample: '115.246'
Tissue used: 'pure endosperm, no chalazal'
AT2G31410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.87936 x 10-1 238 290 49 62 45.08% 55.86% 528 111 TAIR8 Avg. embryo expression (dissected): '878.479'
Avg. embryo expression (LCM): '1437.64'
AT2G31410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.6829 x 10-2 311 159 168 467 66.17% 73.54% 470 635 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273693'
Avg. expression score for this sample: '1062.69'
Avg. expression score in LCM sample: '115.246'
Tissue used: 'full endosperm'
AT2G31410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 49 22 69.01% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-14 357 55 86.65% 412 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31400 GUN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-9 336 69 82.96% 405 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31400 GUN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.78089 x 10-1 206 187 41 58 52.42% 58.59% 393 99 TAIR8 Avg. embryo expression (dissected): '1293.55'
Avg. embryo expression (LCM): '726.991'
AT2G31400 GUN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.86379 x 10-1 146 72 58 91 66.97% 61.07% 218 149 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.388525'
Avg. expression score for this sample: '584.044'
Avg. expression score in LCM sample: '367.683'
Tissue used: 'pure endosperm, no chalazal'
AT2G31400 GUN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.07898 x 10-1 54 15 78.26% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31400 GUN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.61372 x 10-1 183 93 165 418 66.30% 71.70% 276 583 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.388525'
Avg. expression score for this sample: '554.014'
Avg. expression score in LCM sample: '367.683'
Tissue used: 'full endosperm'
AT2G31400 GUN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.91 x 10-3 364 121 75.05% 485 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.34053 x 10-1 154 51 75.12% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9 x 10-8 322 85 93 333 79.12% 78.17% 407 426 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000031'
Avg. expression score for this sample: '320.772'
Avg. expression score in LCM sample: '325.221'
Tissue used: 'full endosperm'
AT2G31390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.97369 x 10-1 24 8 10 3 75.00% 23.08% 32 13 TAIR8 Avg. embryo expression (dissected): '36.3308'
Avg. embryo expression (LCM): '28.4703'
AT2G31390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 617 14 97.78% 631 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.4709 x 10-2 175 43 80.28% 218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.02632 x 10-1 201 77 121 205 72.30% 62.88% 278 326 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000031'
Avg. expression score for this sample: '289.026'
Avg. expression score in LCM sample: '325.221'
Tissue used: 'pure endosperm, no chalazal'
AT2G31380 STH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.63841'
Avg. expression score in LCM sample: '6.55527'
Tissue used: 'pure endosperm, no chalazal'
AT2G31380 STH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.43975'
Avg. embryo expression (LCM): '0'
AT2G31380 STH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 4 0 1 66.67% 100.00% 12 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.8012'
Avg. expression score in LCM sample: '6.55527'
Tissue used: 'full endosperm'
AT2G31380 STH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31380 STH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31380 STH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '314.831'
Avg. embryo expression (LCM): '214.739'
AT2G31370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '477.004'
Avg. expression score in LCM sample: '165.381'
Tissue used: 'pure endosperm, no chalazal'
AT2G31370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '522.149'
Avg. expression score in LCM sample: '165.381'
Tissue used: 'full endosperm'
AT2G31360 ADS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 0.0 306 3 18 149 99.03% 89.22% 309 167 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '2.2e-34'
Avg. expression score for this sample: '4166.03'
Avg. expression score in LCM sample: '506.578'
Tissue used: 'full endosperm'
AT2G31360 ADS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.16894 x 10-1 50 31 7 11 61.73% 61.11% 81 18 TAIR8 Avg. embryo expression (dissected): '1133.93'
Avg. embryo expression (LCM): '1056.41'
AT2G31360 ADS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.48547 x 10-1 570 41 93.29% 611 TAIR8 Mutant effect: 'MEG affected by fie'
AT2G31360 ADS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.01193 x 10-1 180 13 93.26% 193 TAIR8 Mutant effect: 'MEG affected by fie'
AT2G31360 ADS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 6.03 x 10-4 63 2 10 25 96.92% 71.43% 65 35 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '2.2e-34'
Avg. expression score for this sample: '729.856'
Avg. expression score in LCM sample: '506.578'
Tissue used: 'pure endosperm, no chalazal'
AT2G31360 ADS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8 x 10-24 243 107 69.43% 350 TAIR8 Mutant effect: 'MEG affected by fie'
AT2G31350 GLX2-5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 152 47 76.38% 199 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31350 GLX2-5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85824 x 10-1 13 6 5 21 68.42% 80.77% 19 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022152'
Avg. expression score for this sample: '132.313'
Avg. expression score in LCM sample: '56.4106'
Tissue used: 'pure endosperm, no chalazal'
AT2G31350 GLX2-5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.61215 x 10-1 8 7 2 6 53.33% 75.00% 15 8 TAIR8 Avg. embryo expression (dissected): '73.348'
Avg. embryo expression (LCM): '35.4654'
AT2G31350 GLX2-5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6612 x 10-2 60 33 15 95 64.52% 86.36% 93 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022152'
Avg. expression score for this sample: '194.159'
Avg. expression score in LCM sample: '56.4106'
Tissue used: 'full endosperm'
AT2G31350 GLX2-5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.76188 x 10-1 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31350 GLX2-5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-6 187 16 92.12% 203 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31345 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31345 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G31345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G31345 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G31345 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31340 emb1381 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2598 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31340 emb1381 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.5706'
Avg. expression score in LCM sample: '9.67123'
Tissue used: 'full endosperm'
AT2G31340 emb1381 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 5 4 1 5 55.56% 83.33% 9 6 TAIR8 Avg. embryo expression (dissected): '32.5406'
Avg. embryo expression (LCM): '42.4857'
AT2G31340 emb1381 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31340 emb1381 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31340 emb1381 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.402'
Avg. expression score in LCM sample: '9.67123'
Tissue used: 'pure endosperm, no chalazal'
AT2G31335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G31335 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G31335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G31335 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31335 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31335 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31320 PARP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.24787 x 10-1 60 30 66.67% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31320 PARP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4 x 10-6 139 31 81.76% 170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31320 PARP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.21521 x 10-1 82 71 30 23 53.59% 43.40% 153 53 TAIR8 Avg. embryo expression (dissected): '178.938'
Avg. embryo expression (LCM): '141.987'
AT2G31320 PARP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.3235 x 10-1 73 31 38 57 70.19% 60.00% 104 95 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.351391'
Avg. expression score for this sample: '97.256'
Avg. expression score in LCM sample: '42.2124'
Tissue used: 'pure endosperm, no chalazal'
AT2G31320 PARP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.30977 x 10-1 11 8 57.89% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G31320 PARP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.64542 x 10-1 114 66 99 173 63.33% 63.60% 180 272 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.351391'
Avg. expression score for this sample: '137.251'
Avg. expression score in LCM sample: '42.2124'
Tissue used: 'full endosperm'