| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G31780 | ARI11 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 39 | 14 | 73.58% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31780 | ARI11 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.1958 x 10-1 | 59 | 83 | 41.55% | 142 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31780 | ARI11 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31780 | ARI11 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.15763' Avg. expression score in LCM sample: '21.1356' Tissue used: 'full endosperm' |
|||||
| AT2G31780 | ARI11 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.0577' Avg. expression score in LCM sample: '21.1356' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G31780 | ARI11 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT2G31770 | ARI9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.178221' Avg. embryo expression (LCM): '0' |
|||||
| AT2G31770 | ARI9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31770 | ARI9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.71027 x 10-1 | 244 | 146 | 62.56% | 390 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31770 | ARI9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.81504 x 10-1 | 10 | 5 | 7 | 6 | 66.67% | 46.15% | 15 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '11.4111' Avg. expression score in LCM sample: '44.2113' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G31770 | ARI9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.78716 x 10-1 | 0 | 2 | 6 | 22 | 0.00% | 78.57% | 2 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.95974' Avg. expression score in LCM sample: '44.2113' Tissue used: 'full endosperm' |
||||
| AT2G31770 | ARI9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.45457 x 10-1 | 18 | 12 | 60.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31760 | ARI10 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.8665 x 10-2 | 109 | 12 | 90.08% | 121 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31760 | ARI10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.14215' Avg. expression score in LCM sample: '11.435' Tissue used: 'full endosperm' |
|||||
| AT2G31760 | ARI10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31760 | ARI10 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
|||||
| AT2G31760 | ARI10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 2 | 3 | 100.00% | 60.00% | 1 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.86476' Avg. expression score in LCM sample: '11.435' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G31760 | ARI10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.501 x 10-3 | 100 | 313 | 24.21% | 413 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31751 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.6891 x 10-1 | 9 | 6 | 60.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31751 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.7945 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31751 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.67006 x 10-1 | 17 | 9 | 1 | 14 | 65.38% | 93.33% | 26 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.70122' Avg. expression score for this sample: '27.5992' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G31751 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 7 | 1 | 11 | 36.36% | 91.67% | 11 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.70122' Avg. expression score for this sample: '21.0966' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G31751 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 3 | 3 | 2 | 62.50% | 40.00% | 8 | 5 | TAIR8 |
Avg. embryo expression (dissected): '20.7112' Avg. embryo expression (LCM): '3.11453' |
||||
| AT2G31751 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.77096 x 10-1 | 33 | 23 | 58.93% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31750 | UGT74D1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.488 x 10-3 | 1035 | 834 | 55.38% | 1869 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31750 | UGT74D1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 106 | 114 | 25 | 33 | 48.18% | 56.90% | 220 | 58 | TAIR8 |
Avg. embryo expression (dissected): '157.998' Avg. embryo expression (LCM): '79.2321' |
|||
| AT2G31750 | UGT74D1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.77407 x 10-1 | 4 | 6 | 40.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31750 | UGT74D1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5133 x 10-2 | 927 | 370 | 71.47% | 1297 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31750 | UGT74D1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.87517 x 10-1 | 21 | 16 | 14 | 20 | 56.76% | 58.82% | 37 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.696849' Avg. expression score for this sample: '25.1509' Avg. expression score in LCM sample: '1.83724' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G31750 | UGT74D1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 58 | 20 | 33 | 51 | 74.36% | 60.71% | 78 | 84 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.696849' Avg. expression score for this sample: '52.8692' Avg. expression score in LCM sample: '1.83724' Tissue used: 'full endosperm' |
||||
| AT2G31740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.04432 x 10-1 | 41 | 17 | 24 | 56 | 70.69% | 70.00% | 58 | 80 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487532' Avg. expression score for this sample: '33.1027' Avg. expression score in LCM sample: '17.5493' Tissue used: 'full endosperm' |
|||||
| AT2G31740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 3 | 72.73% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.41491 x 10-1 | 17 | 20 | 3 | 10 | 45.95% | 76.92% | 37 | 13 | TAIR8 |
Avg. embryo expression (dissected): '32.0254' Avg. embryo expression (LCM): '45.4746' |
||||
| AT2G31740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.97226 x 10-1 | 11 | 5 | 5 | 14 | 68.75% | 73.68% | 16 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487532' Avg. expression score for this sample: '11.7232' Avg. expression score in LCM sample: '17.5493' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G31740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 109 | 45 | 70.78% | 154 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.93288 x 10-1 | 147 | 45 | 76.56% | 192 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.4 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.4957 x 10-2 | 23 | 1 | 95.83% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.8302' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G31730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.53338' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G31730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '12.6713' Avg. embryo expression (LCM): '16.1001' |
|||||
| AT2G31725 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '52.664' Avg. embryo expression (LCM): '67.6656' |
||||
| AT2G31725 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31725 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 3 | 50.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31725 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.8099' Avg. expression score in LCM sample: '11.6407' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G31725 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.0862' Avg. expression score in LCM sample: '11.6407' Tissue used: 'full endosperm' |
|||||
| AT2G31725 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.16484 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.30769 x 10-1 | 7 | 0 | 0 | 0 | 100.00% | 7 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.1' Avg. expression score for this sample: '2.2926' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G31720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.70229' Avg. embryo expression (LCM): '0' |
|||||
| AT2G31720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.1' Avg. expression score for this sample: '.54933' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G31720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-5 | 2 | 16 | 11.11% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G31710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '18.563' Avg. expression score in LCM sample: '8.71586' Tissue used: 'full endosperm' |
|||||||
| AT2G31710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '15.304' Avg. expression score in LCM sample: '8.71586' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G31710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '29.2806' Avg. embryo expression (LCM): '40.9284' |
||||||
| AT2G31710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G31700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G31700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G31690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.459777' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G31690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G31690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.352702' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G31690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31680 | RABA5d | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1839 x 10-2 | 51 | 5 | 91.07% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31680 | RABA5d | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 3 | 78.57% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31680 | RABA5d | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.24602 x 10-1 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31680 | RABA5d | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.1066 x 10-1 | 19 | 3 | 11 | 25 | 86.36% | 69.44% | 22 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.110486' Avg. expression score for this sample: '260.367' Avg. expression score in LCM sample: '71.9316' Tissue used: 'full endosperm' |
||||
| AT2G31680 | RABA5d | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.80579 x 10-1 | 6 | 2 | 1 | 13 | 75.00% | 92.86% | 8 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.110486' Avg. expression score for this sample: '114.265' Avg. expression score in LCM sample: '71.9316' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G31680 | RABA5d | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 5 | 1 | 1 | 37.50% | 50.00% | 8 | 2 | TAIR8 |
Avg. embryo expression (dissected): '140.854' Avg. embryo expression (LCM): '164.329' |
|||
| AT2G31670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1398.07' Avg. embryo expression (LCM): '898.717' |
||||||
| AT2G31670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1687.38' Avg. expression score in LCM sample: '647.502' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G31670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1202.32' Avg. expression score in LCM sample: '647.502' Tissue used: 'full endosperm' |
|||||||
| AT2G31670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31660 | SAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-23 | 356 | 42 | 89.45% | 398 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31660 | SAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.0246 x 10-2 | 98 | 15 | 98 | 58 | 86.73% | 37.18% | 113 | 156 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.03023' Avg. expression score for this sample: '73.6468' Avg. expression score in LCM sample: '32.9674' Tissue used: 'full endosperm' |
||||
| AT2G31660 | SAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.1907 x 10-2 | 11 | 18 | 37.93% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31660 | SAD2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.6598 x 10-2 | 139 | 50 | 53 | 15 | 73.54% | 22.06% | 189 | 68 | TAIR8 |
Avg. embryo expression (dissected): '127.894' Avg. embryo expression (LCM): '139.174' |
|||
| AT2G31660 | SAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.26119 x 10-1 | 59 | 8 | 47 | 28 | 88.06% | 37.33% | 67 | 75 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.03023' Avg. expression score for this sample: '46.2353' Avg. expression score in LCM sample: '32.9674' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G31660 | SAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.0 x 10-12 | 108 | 213 | 33.64% | 321 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31650 | ATX1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.50005 x 10-1 | 215 | 99 | 68.47% | 314 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31650 | ATX1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.37541 x 10-1 | 35 | 23 | 60.34% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31650 | ATX1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2273 x 10-2 | 158 | 34 | 65 | 139 | 82.29% | 68.14% | 192 | 204 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.237134' Avg. expression score for this sample: '84.8522' Avg. expression score in LCM sample: '61.1433' Tissue used: 'full endosperm' |
||||
| AT2G31650 | ATX1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.13914 x 10-1 | 58 | 21 | 59 | 63 | 73.42% | 51.64% | 79 | 122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.237134' Avg. expression score for this sample: '71.0519' Avg. expression score in LCM sample: '61.1433' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G31650 | ATX1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.64318 x 10-1 | 61 | 56 | 24 | 29 | 52.14% | 54.72% | 117 | 53 | TAIR8 |
Avg. embryo expression (dissected): '89.9927' Avg. embryo expression (LCM): '90.2083' |
|||
| AT2G31650 | ATX1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.388 x 10-3 | 237 | 64 | 78.74% | 301 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G31620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.379009' Avg. embryo expression (LCM): '1.64517' |
||||||
| AT2G31620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G31620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |