| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G32510 | MAPKKK17 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.04169' Avg. embryo expression (LCM): '0' |
|||||
| AT2G32510 | MAPKKK17 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.8408 x 10-2 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32500 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.43374 x 10-1 | 13 | 5 | 3 | 1 | 72.22% | 25.00% | 18 | 4 | TAIR8 |
Avg. embryo expression (dissected): '41.7893' Avg. embryo expression (LCM): '50.9376' |
||||
| AT2G32500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.07985 x 10-1 | 12 | 2 | 2 | 1 | 85.71% | 33.33% | 14 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '18.8414' Avg. expression score in LCM sample: '9.40667' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G32500 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.223 x 10-3 | 24 | 0 | 100.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 3 | 7 | 10 | 70.00% | 58.82% | 10 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '23.5729' Avg. expression score in LCM sample: '9.40667' Tissue used: 'full endosperm' |
|||||
| AT2G32500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.177 x 10-2 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32487 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32487 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32487 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G32487 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.497893' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G32487 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.67656' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G32487 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32480 | ARASP | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32480 | ARASP | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '182.93' Avg. expression score in LCM sample: '83.1314' Tissue used: 'full endosperm' |
|||||
| AT2G32480 | ARASP | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '166.414' Avg. embryo expression (LCM): '145.278' |
|||||
| AT2G32480 | ARASP | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32480 | ARASP | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32480 | ARASP | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '133.276' Avg. expression score in LCM sample: '83.1314' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G32470 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.171919' Avg. expression score for this sample: '20.6867' Avg. expression score in LCM sample: '9.39197' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G32470 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G32470 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.21739 x 10-1 | 7 | 1 | 0 | 5 | 87.50% | 100.00% | 8 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.171919' Avg. expression score for this sample: '29.1227' Avg. expression score in LCM sample: '9.39197' Tissue used: 'full endosperm' |
|||||
| AT2G32470 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '27.4338' Avg. embryo expression (LCM): '21.1486' |
||||||
| AT2G32470 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.98246 x 10-1 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32470 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.7267 x 10-2 | 3 | 4 | 42.86% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32460 | MYB101 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32460 | MYB101 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.88889 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32460 | MYB101 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 1 | 3 | 4 | 80.00% | 57.14% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '485.278' Avg. expression score in LCM sample: '404.207' Tissue used: 'full endosperm' |
||||
| AT2G32460 | MYB101 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 2 | 0 | 3 | 0.00% | 100.00% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '926.164' Avg. expression score in LCM sample: '404.207' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G32460 | MYB101 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.88889 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32460 | MYB101 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '55.1229' Avg. embryo expression (LCM): '2.81312' |
||||
| AT2G32450 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 1 | 1 | 0 | 66.67% | 0.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '91.3344' Avg. embryo expression (LCM): '85.8379' |
||||
| AT2G32450 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 2 | 1 | 0 | 50.00% | 0.00% | 4 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '41.1531' Avg. expression score in LCM sample: '21.9734' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G32450 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32450 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 2 | 7 | 50.00% | 77.78% | 2 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '104.28' Avg. expression score in LCM sample: '21.9734' Tissue used: 'full endosperm' |
|||||
| AT2G32450 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32450 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.62126 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32440 | KAO2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32440 | KAO2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32440 | KAO2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32440 | KAO2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '34.1791' Avg. embryo expression (LCM): '31.0574' |
|||||
| AT2G32440 | KAO2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '71.5862' Avg. expression score in LCM sample: '197.466' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G32440 | KAO2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '38.2064' Avg. expression score in LCM sample: '197.466' Tissue used: 'full endosperm' |
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| AT2G32430 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.10526 x 10-1 | 4 | 0 | 0 | 6 | 100.00% | 100.00% | 4 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018404' Avg. expression score for this sample: '7.36593' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G32430 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.679877' Avg. embryo expression (LCM): '0' |
||||||
| AT2G32430 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32430 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 38 | 0 | 100.00% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32430 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.30769 x 10-1 | 2 | 0 | 0 | 5 | 100.00% | 100.00% | 2 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.018404' Avg. expression score for this sample: '6.88949' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G32430 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 29 | 0 | 100.00% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32415 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.92141 x 10-1 | 14 | 7 | 66.67% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32415 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.63104 x 10-1 | 6 | 5 | 5 | 7 | 54.55% | 58.33% | 11 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.688941' Avg. expression score for this sample: '35.958' Avg. expression score in LCM sample: '16.6086' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G32415 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32415 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 12 | 2 | 9 | 8 | 85.71% | 47.06% | 14 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.688941' Avg. expression score for this sample: '31.3842' Avg. expression score in LCM sample: '16.6086' Tissue used: 'full endosperm' |
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| AT2G32415 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.23107 x 10-1 | 6 | 10 | 2 | 1 | 37.50% | 33.33% | 16 | 3 | TAIR8 |
Avg. embryo expression (dissected): '61.8169' Avg. embryo expression (LCM): '67.4019' |
||||
| AT2G32415 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3468 x 10-2 | 25 | 4 | 86.21% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32410 | AXL | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.86713 x 10-1 | 4 | 5 | 44.44% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32410 | AXL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 1 | 0 | 1 | 75.00% | 100.00% | 4 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '23.4735' Avg. expression score in LCM sample: '22.6495' Tissue used: 'full endosperm' |
||||
| AT2G32410 | AXL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '17.4488' Avg. expression score in LCM sample: '22.6495' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G32410 | AXL | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32410 | AXL | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '19.5006' Avg. embryo expression (LCM): '25.3558' |
|||||
| AT2G32410 | AXL | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.86713 x 10-1 | 4 | 5 | 44.44% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32400 | GLR5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.0743 x 10-2 | 21 | 3 | 87.50% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32400 | GLR5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 24 | 24 | 7 | 5 | 50.00% | 41.67% | 48 | 12 | TAIR8 |
Avg. embryo expression (dissected): '39.4562' Avg. embryo expression (LCM): '25.8581' |
|||
| AT2G32400 | GLR5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.38548 x 10-1 | 15 | 17 | 12 | 35 | 46.88% | 74.47% | 32 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.649337' Avg. expression score for this sample: '44.834' Avg. expression score in LCM sample: '19.8716' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G32400 | GLR5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.9727 x 10-2 | 37 | 8 | 82.22% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32400 | GLR5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.55477 x 10-1 | 24 | 15 | 18 | 34 | 61.54% | 65.38% | 39 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.649337' Avg. expression score for this sample: '44.3269' Avg. expression score in LCM sample: '19.8716' Tissue used: 'full endosperm' |
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| AT2G32400 | GLR5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.55247 x 10-1 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32390 | GLR3.5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32390 | GLR3.5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32390 | GLR3.5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.5496' Avg. embryo expression (LCM): '2.64986' |
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| AT2G32390 | GLR3.5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.17761' Avg. expression score in LCM sample: '2.58683' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G32390 | GLR3.5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 0 | 2 | 1 | 100.00% | 33.33% | 5 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.62894' Avg. expression score in LCM sample: '2.58683' Tissue used: 'full endosperm' |
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| AT2G32390 | GLR3.5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 0 | 3 | 66.67% | 100.00% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '22.3302' Avg. expression score in LCM sample: '43.2854' Tissue used: 'full endosperm' |
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| AT2G32380 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '30.0061' Avg. embryo expression (LCM): '58.8369' |
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| AT2G32380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32380 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 3 | 70.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '22.1274' Avg. expression score in LCM sample: '43.2854' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G32370 | HDG3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | PEG | 2.0 x 10-30 | 42 | 122 | 116 | 21 | 25.61% | 15.33% | 164 | 137 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '147.892' Avg. expression score in LCM sample: '256.214' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G32370 | HDG3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.05568 x 10-1 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32370 | HDG3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | PEG | 1.5 x 10-15 | 1 | 4 | 100 | 21 | 20.00% | 17.36% | 5 | 121 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '67.5777' Avg. expression score in LCM sample: '256.214' Tissue used: 'full endosperm' |
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| AT2G32370 | HDG3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.00323 x 10-1 | 2 | 6 | 2 | 1 | 25.00% | 33.33% | 8 | 3 | TAIR8 |
Avg. embryo expression (dissected): '8.04742' Avg. embryo expression (LCM): '0' |
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| AT2G32370 | HDG3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 208 | 123 | 62.84% | 331 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32370 | HDG3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-23 | 527 | 595 | 46.97% | 1122 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G32360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.484 x 10-3 | 43 | 5 | 89.58% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32360 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.7593 x 10-2 | 17 | 16 | 51.52% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.09 x 10-4 | 15 | 2 | 5 | 55 | 88.24% | 91.67% | 17 | 60 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.25879' Avg. expression score for this sample: '86.833' Avg. expression score in LCM sample: '41.8303' Tissue used: 'full endosperm' |
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| AT2G32360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.6982 x 10-1 | 64 | 48 | 34 | 87 | 57.14% | 71.90% | 112 | 121 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.25879' Avg. expression score for this sample: '347.021' Avg. expression score in LCM sample: '41.8303' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G32360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G32360 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 3 | 4 | 0 | 66.67% | 0.00% | 9 | 4 | TAIR8 |
Avg. embryo expression (dissected): '34.4104' Avg. embryo expression (LCM): '4.77226' |
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| AT2G32350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G32350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G32350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G32350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.713251' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G32350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G32350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G32340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.82263 x 10-1 | 19 | 13 | 59.38% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G32340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.649 x 10-3 | 14 | 23 | 37.84% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |