Displaying data sets 108901 - 109000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G32670 VAMP725 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.30014 x 10-1 17 2 0 2 89.47% 100.00% 19 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.132391'
Avg. expression score for this sample: '21.8149'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32670 VAMP725 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1739 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32670 VAMP725 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8661 x 10-1 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32670 VAMP725 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.97038'
Avg. embryo expression (LCM): '10.2729'
AT2G32670 VAMP725 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.132391'
Avg. expression score for this sample: '3.44981'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32670 VAMP725 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.11111 x 10-1 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32660 RLP22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32660 RLP22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000015'
Avg. expression score for this sample: '.982084'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32660 RLP22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.23077 x 10-1 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32660 RLP22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2 x 10-5 3 0 0 38 100.00% 100.00% 3 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000015'
Avg. expression score for this sample: '11.0151'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32660 RLP22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G32660 RLP22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.90323 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '176.591'
Avg. expression score in LCM sample: '39.4051'
Tissue used: 'pure endosperm, no chalazal'
AT2G32650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 2 0.00% 100.00% 3 2 TAIR8 Avg. embryo expression (dissected): '780.02'
Avg. embryo expression (LCM): '796.302'
AT2G32650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '181.6'
Avg. expression score in LCM sample: '39.4051'
Tissue used: 'full endosperm'
AT2G32650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.28571 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32645 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.911715'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32645 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32645 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32645 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G32645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 0 3 75.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677684'
Avg. expression score for this sample: '6.81952'
Avg. expression score in LCM sample: '2.77791'
Tissue used: 'pure endosperm, no chalazal'
AT2G32640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.53742 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.25975 x 10-1 20 8 6 14 71.43% 70.00% 28 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677684'
Avg. expression score for this sample: '24.9571'
Avg. expression score in LCM sample: '2.77791'
Tissue used: 'full endosperm'
AT2G32640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 3 2 100.00% 40.00% 3 5 TAIR8 Avg. embryo expression (dissected): '23.2963'
Avg. embryo expression (LCM): '9.49428'
AT2G32640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.71196 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-14 158 8 95.18% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 320 6 98.16% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.831 x 10-3 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.05584 x 10-1 212 66 94 186 76.26% 66.43% 278 280 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061886'
Avg. expression score for this sample: '182.852'
Avg. expression score in LCM sample: '89.4074'
Tissue used: 'pure endosperm, no chalazal'
AT2G32630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.8541 x 10-1 238 186 97 70 56.13% 41.92% 424 167 TAIR8 Avg. embryo expression (dissected): '315.852'
Avg. embryo expression (LCM): '282.807'
AT2G32630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.36493 x 10-1 222 94 77 167 70.25% 68.44% 316 244 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061886'
Avg. expression score for this sample: '235.84'
Avg. expression score in LCM sample: '89.4074'
Tissue used: 'full endosperm'
AT2G32620 CSLB02 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.221362'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32620 CSLB02 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32620 CSLB02 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32620 CSLB02 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G32620 CSLB02 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.113207'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32620 CSLB02 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32610 CSLB01 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32610 CSLB01 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32610 CSLB01 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32610 CSLB01 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.387215'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32610 CSLB01 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G32610 CSLB01 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2117 x 10-2 163 37 81.50% 200 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.13486 x 10-1 16 7 69.57% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.72633 x 10-1 42 13 25 26 76.36% 50.98% 55 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200147'
Avg. expression score for this sample: '47.8856'
Avg. expression score in LCM sample: '34.3196'
Tissue used: 'pure endosperm, no chalazal'
AT2G32600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 43 39 19 14 52.44% 42.42% 82 33 TAIR8 Avg. embryo expression (dissected): '78.4471'
Avg. embryo expression (LCM): '77.5115'
AT2G32600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.5924 x 10-2 62 28 25 101 68.89% 80.16% 90 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200147'
Avg. expression score for this sample: '47.4808'
Avg. expression score in LCM sample: '34.3196'
Tissue used: 'full endosperm'
AT2G32600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0 x 10-5 201 33 85.90% 234 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32590 EMB2795 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-22 456 65 87.52% 521 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32590 EMB2795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.16121 x 10-1 49 54 53 193 47.57% 78.46% 103 246 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.26635'
Avg. expression score for this sample: '35.245'
Avg. expression score in LCM sample: '29.3517'
Tissue used: 'full endosperm'
AT2G32590 EMB2795 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.757 x 10-3 26 3 89.66% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32590 EMB2795 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-10 75 118 38.86% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32590 EMB2795 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.921 x 10-3 100 235 35 88 29.85% 71.54% 335 123 TAIR8 Avg. embryo expression (dissected): '102.279'
Avg. embryo expression (LCM): '57.6815'
AT2G32590 EMB2795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1556 x 10-2 49 120 32 163 28.99% 83.59% 169 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.26635'
Avg. expression score for this sample: '48.9262'
Avg. expression score in LCM sample: '29.3517'
Tissue used: 'pure endosperm, no chalazal'
AT2G32580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.832 x 10-3 185 51 57 146 78.39% 71.92% 236 203 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-09'
Avg. expression score for this sample: '271.195'
Avg. expression score in LCM sample: '22.4437'
Tissue used: 'pure endosperm, no chalazal'
AT2G32580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.34555 x 10-1 84 27 75.68% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9 x 10-8 394 83 77 211 82.60% 73.26% 477 288 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-09'
Avg. expression score for this sample: '291.507'
Avg. expression score in LCM sample: '22.4437'
Tissue used: 'full endosperm'
AT2G32580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.02036 x 10-1 72 49 37 26 59.50% 41.27% 121 63 TAIR8 Avg. embryo expression (dissected): '188.461'
Avg. embryo expression (LCM): '90.3841'
AT2G32580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 783 10 98.74% 793 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0 x 10-10 116 2 98.31% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.3 75 9 89.29% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.975 x 10-2 132 19 87.42% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1073 x 10-2 10 0 0 5 100.00% 100.00% 10 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-07'
Avg. expression score for this sample: '26.1275'
Avg. expression score in LCM sample: '5.39413'
Tissue used: 'pure endosperm, no chalazal'
AT2G32560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 7 1 4 36.36% 80.00% 11 5 TAIR8 Avg. embryo expression (dissected): '17.206'
Avg. embryo expression (LCM): '1.84611'
AT2G32560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.6 x 10-6 37 4 3 52 90.24% 94.55% 41 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-07'
Avg. expression score for this sample: '61.6536'
Avg. expression score in LCM sample: '5.39413'
Tissue used: 'full endosperm'
AT2G32550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 0 4 50.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '10.119'
Avg. expression score in LCM sample: '11.9935'
Tissue used: 'full endosperm'
AT2G32550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1495 x 10-1 40 17 70.18% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 1 0 50.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '18.4163'
Avg. embryo expression (LCM): '9.218'
AT2G32550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '10.0858'
Avg. expression score in LCM sample: '11.9935'
Tissue used: 'pure endosperm, no chalazal'
AT2G32550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.20634 x 10-1 52 22 70.27% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32540 CSLB04 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32540 CSLB04 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32540 CSLB04 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32540 CSLB04 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32540 CSLB04 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.257035'
Avg. embryo expression (LCM): '0'
AT2G32540 CSLB04 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32530 CSLB03 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32530 CSLB03 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32530 CSLB03 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.324414'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G32530 CSLB03 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G32530 CSLB03 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.20813'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G32530 CSLB03 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.1249'
Avg. expression score in LCM sample: '38.3028'
Tissue used: 'full endosperm'
AT2G32520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '93.0628'
Avg. embryo expression (LCM): '38.3665'
AT2G32520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '87.3326'
Avg. expression score in LCM sample: '38.3028'
Tissue used: 'pure endosperm, no chalazal'
AT2G32510 MAPKKK17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9062 x 10-2 13 0 0 5 100.00% 100.00% 13 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-13'
Avg. expression score for this sample: '71.1146'
Avg. expression score in LCM sample: '19.7246'
Tissue used: 'pure endosperm, no chalazal'
AT2G32510 MAPKKK17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.16792 x 10-1 46 0 100.00% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32510 MAPKKK17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.6 x 10-11 99 5 5 62 95.19% 92.54% 104 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.0e-13'
Avg. expression score for this sample: '271.99'
Avg. expression score in LCM sample: '19.7246'
Tissue used: 'full endosperm'
AT2G32510 MAPKKK17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.04169'
Avg. embryo expression (LCM): '0'