Displaying data sets 10801 - 10900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G51520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.40593'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '86.637'
Avg. expression score in LCM sample: '25.6185'
Tissue used: 'pure endosperm, no chalazal'
AT5G51510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '156.414'
Avg. expression score in LCM sample: '25.6185'
Tissue used: 'full endosperm'
AT5G51510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '106.205'
Avg. embryo expression (LCM): '65.6562'
AT5G51510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.11194 x 10-1 5 4 0 9 55.56% 100.00% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047517'
Avg. expression score for this sample: '7.16618'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.6381 x 10-2 12 23 0 73 34.29% 100.00% 35 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047517'
Avg. expression score for this sample: '22.3751'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.987 x 10-3 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.79626 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-7 82 0 100.00% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.86723 x 10-1 112 64 77 125 63.64% 61.88% 176 202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.109282'
Avg. expression score for this sample: '855.331'
Avg. expression score in LCM sample: '121.067'
Tissue used: 'pure endosperm, no chalazal'
AT5G51490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2811 x 10-2 572 302 279 792 65.45% 73.95% 874 1071 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.109282'
Avg. expression score for this sample: '1628.44'
Avg. expression score in LCM sample: '121.067'
Tissue used: 'full endosperm'
AT5G51490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.40867 x 10-1 6 0 1 3 100.00% 75.00% 6 4 TAIR8 Avg. embryo expression (dissected): '53.7182'
Avg. embryo expression (LCM): '1.44424'
AT5G51490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87408 x 10-1 206 87 70.31% 293 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-6 37 0 100.00% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-15 104 1 99.05% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51480 SKS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.258 x 10-3 341 182 126 469 65.20% 78.82% 523 595 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-14'
Avg. expression score for this sample: '137.574'
Avg. expression score in LCM sample: '68.3747'
Tissue used: 'pure endosperm, no chalazal'
AT5G51480 SKS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-15 214 93 120 706 69.71% 85.47% 307 826 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-14'
Avg. expression score for this sample: '88.0075'
Avg. expression score in LCM sample: '68.3747'
Tissue used: 'full endosperm'
AT5G51480 SKS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 10 3 2 2 76.92% 50.00% 13 4 TAIR8 Avg. embryo expression (dissected): '2.99155'
Avg. embryo expression (LCM): '0'
AT5G51480 SKS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9 x 10-6 77 3 96.25% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51480 SKS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8 x 10-14 389 35 91.75% 424 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51480 SKS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-12 622 82 88.35% 704 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.207725'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51460 ATTPPA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.73668'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51460 ATTPPA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 2 4 33.33% 66.67% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.61917'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51460 ATTPPA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 6 2 0 60.00% 0.00% 15 2 TAIR8 Avg. embryo expression (dissected): '19.9863'
Avg. embryo expression (LCM): '12.6214'
AT5G51460 ATTPPA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51460 ATTPPA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.16484 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51460 ATTPPA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.3168 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51451 RGF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.3438'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51451 RGF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '45.3997'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51451 RGF5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '99.0989'
Avg. embryo expression (LCM): '37.5627'
AT5G51451 RGF5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51451 RGF5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51451 RGF5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51450 RIN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.31094 x 10-1 6 1 4 9 85.71% 69.23% 7 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29019'
Avg. expression score for this sample: '23.4311'
Avg. expression score in LCM sample: '15.9766'
Tissue used: 'pure endosperm, no chalazal'
AT5G51450 RIN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.09497 x 10-1 24 10 4 21 70.59% 84.00% 34 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.29019'
Avg. expression score for this sample: '24.8661'
Avg. expression score in LCM sample: '15.9766'
Tissue used: 'full endosperm'
AT5G51450 RIN3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 10 1 4 47.37% 80.00% 19 5 TAIR8 Avg. embryo expression (dissected): '33.7503'
Avg. embryo expression (LCM): '13.086'
AT5G51450 RIN3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.25457 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51450 RIN3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.7471 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51450 RIN3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.18831 x 10-1 27 10 72.97% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.7 x 10-11 5300 2931 2410 7085 64.39% 74.62% 8231 9495 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8176.94'
Avg. expression score in LCM sample: '4.85031'
Tissue used: 'pure endosperm, no chalazal'
AT5G51440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3050 1545 1679 6947 66.38% 80.54% 4595 8626 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5090.13'
Avg. expression score in LCM sample: '4.85031'
Tissue used: 'full endosperm'
AT5G51440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.6832 x 10-2 4389 5007 1099 1421 46.71% 56.39% 9396 2520 TAIR8 Avg. embryo expression (dissected): '8855.27'
Avg. embryo expression (LCM): '156.291'
AT5G51440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4 x 10-19 1947 475 80.39% 2422 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7 x 10-5 675 185 78.49% 860 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-5 1043 306 77.32% 1349 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51430 EYE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.84368 x 10-1 20 3 9 23 86.96% 71.88% 23 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078678'
Avg. expression score for this sample: '194.276'
Avg. expression score in LCM sample: '114.188'
Tissue used: 'pure endosperm, no chalazal'
AT5G51430 EYE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.31078 x 10-1 23 6 3 12 79.31% 80.00% 29 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078678'
Avg. expression score for this sample: '190.392'
Avg. expression score in LCM sample: '114.188'
Tissue used: 'full endosperm'
AT5G51430 EYE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 9 1 2 47.06% 66.67% 17 3 TAIR8 Avg. embryo expression (dissected): '147.731'
Avg. embryo expression (LCM): '61.4742'
AT5G51430 EYE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51430 EYE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.5572 43 15 74.14% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51430 EYE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.42448 x 10-1 36 5 87.80% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.17682'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'pure endosperm, no chalazal'
AT5G51420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 1 6 0 91.67% 0.00% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.38939'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'full endosperm'
AT5G51420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.62554 x 10-1 9 13 0 0 40.91% 22 0 TAIR8 Avg. embryo expression (dissected): '6.91448'
Avg. embryo expression (LCM): '1.92146'
AT5G51420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.1573 x 10-2 535 308 236 728 63.46% 75.52% 843 964 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-07'
Avg. expression score for this sample: '1146.1'
Avg. expression score in LCM sample: '250.394'
Tissue used: 'pure endosperm, no chalazal'
AT5G51410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.4 x 10-7 709 308 289 945 69.71% 76.58% 1017 1234 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-07'
Avg. expression score for this sample: '826.427'
Avg. expression score in LCM sample: '250.394'
Tissue used: 'full endosperm'
AT5G51410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.90693 x 10-1 376 470 161 190 44.44% 54.13% 846 351 TAIR8 Avg. embryo expression (dissected): '1181.5'
Avg. embryo expression (LCM): '690.37'
AT5G51410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.0 x 10-5 198 39 83.54% 237 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-11 962 221 81.32% 1183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-23 1124 199 84.96% 1323 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.96997 x 10-1 70 166 44 379 29.66% 89.60% 236 423 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000078'
Avg. expression score for this sample: '403.429'
Avg. expression score in LCM sample: '148.464'
Tissue used: 'pure endosperm, no chalazal'
AT5G51400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0 x 10-7 113 115 57 495 49.56% 89.67% 228 552 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000078'
Avg. expression score for this sample: '515.018'
Avg. expression score in LCM sample: '148.464'
Tissue used: 'full endosperm'
AT5G51400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.447 x 10-3 47 152 19 56 23.62% 74.67% 199 75 TAIR8 Avg. embryo expression (dissected): '309.884'
Avg. embryo expression (LCM): '135.733'
AT5G51400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.5 x 10-10 167 13 92.78% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-25 510 38 93.07% 548 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.59 x 10-4 290 64 81.92% 354 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 0 66.67% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170634'
Avg. expression score for this sample: '6.22401'
Avg. expression score in LCM sample: '8.87754'
Tissue used: 'pure endosperm, no chalazal'
AT5G51390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3858 x 10-2 7 2 1 20 77.78% 95.24% 9 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170634'
Avg. expression score for this sample: '33.0289'
Avg. expression score in LCM sample: '8.87754'
Tissue used: 'full endosperm'
AT5G51390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '7.33933'
Avg. embryo expression (LCM): '5.04855'
AT5G51390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6681 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.53055 x 10-1 31 5 86.11% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.41642 x 10-1 64 33 27 85 65.98% 75.89% 97 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53076'
Avg. expression score for this sample: '103.545'
Avg. expression score in LCM sample: '122.404'
Tissue used: 'pure endosperm, no chalazal'
AT5G51380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.38442 x 10-1 83 54 85 134 60.58% 61.19% 137 219 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53076'
Avg. expression score for this sample: '132.068'
Avg. expression score in LCM sample: '122.404'
Tissue used: 'full endosperm'
AT5G51380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.89848 x 10-1 158 175 36 48 47.45% 57.14% 333 84 TAIR8 Avg. embryo expression (dissected): '283.384'
Avg. embryo expression (LCM): '200.41'
AT5G51380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 32 17 65.31% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.4283 x 10-2 327 225 59.24% 552 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8746 x 10-2 181 68 72.69% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '113.779'
Avg. expression score in LCM sample: '50.2228'
Tissue used: 'pure endosperm, no chalazal'
AT5G51370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '203.719'
Avg. expression score in LCM sample: '50.2228'
Tissue used: 'full endosperm'
AT5G51370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '140.746'
Avg. embryo expression (LCM): '87.4705'
AT5G51370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'