Displaying data sets 108601 - 108700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G33080 RLP28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33080 RLP28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1073 x 10-2 5 0 0 10 100.00% 100.00% 5 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '3.1832'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33080 RLP28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33080 RLP28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '.230796'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33080 RLP28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33080 RLP28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33070 NSP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.28 x 10-4 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33070 NSP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33070 NSP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33070 NSP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055616'
Avg. expression score for this sample: '.149687'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33070 NSP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.03864'
Avg. embryo expression (LCM): '0'
AT2G33070 NSP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.3381 x 10-2 15 25 0 4 37.50% 100.00% 40 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055616'
Avg. expression score for this sample: '8.33687'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33060 RLP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.17669 x 10-1 34 16 19 74 68.00% 79.57% 50 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085649'
Avg. expression score for this sample: '15.6743'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33060 RLP27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 22 19 6 4 53.66% 40.00% 41 10 TAIR8 Avg. embryo expression (dissected): '11.272'
Avg. embryo expression (LCM): '11.1143'
AT2G33060 RLP27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.80115 x 10-1 14 2 2 2 87.50% 50.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085649'
Avg. expression score for this sample: '3.79862'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33060 RLP27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2198 x 10-2 33 3 91.67% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33060 RLP27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.59 x 10-4 141 14 90.97% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33060 RLP27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.3 x 10-5 107 7 93.86% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33051 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3175 x 10-2 52 3 94.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33051 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31989 x 10-1 12 0 2 5 100.00% 71.43% 12 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08098'
Avg. expression score for this sample: '21.1622'
Avg. expression score in LCM sample: '4.9238'
Tissue used: 'pure endosperm, no chalazal'
AT2G33051 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 1 1 1 83.33% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '9.78842'
Avg. embryo expression (LCM): '0'
AT2G33051 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6715 x 10-1 23 5 6 17 82.14% 73.91% 28 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08098'
Avg. expression score for this sample: '29.5922'
Avg. expression score in LCM sample: '4.9238'
Tissue used: 'full endosperm'
AT2G33051 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.73 x 10-4 62 0 100.00% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33051 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33050 RLP26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2836 x 10-1 48 0 100.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33050 RLP26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-6 437 0 100.00% 437 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33050 RLP26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.61295 x 10-1 263 6 97.77% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33050 RLP26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-13 79 1 7 96 98.75% 93.20% 80 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-19'
Avg. expression score for this sample: '45.5559'
Avg. expression score in LCM sample: '8.14264'
Tissue used: 'full endosperm'
AT2G33050 RLP26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.90793 x 10-1 11 2 3 4 84.62% 57.14% 13 7 TAIR8 Avg. embryo expression (dissected): '12.8301'
Avg. embryo expression (LCM): '2.97638'
AT2G33050 RLP26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.7 x 10-7 60 1 4 32 98.36% 88.89% 61 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-19'
Avg. expression score for this sample: '30.1305'
Avg. expression score in LCM sample: '8.14264'
Tissue used: 'pure endosperm, no chalazal'
AT2G33040 ATP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '95.4576'
Avg. expression score in LCM sample: '113.865'
Tissue used: 'pure endosperm, no chalazal'
AT2G33040 ATP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '149.979'
Avg. embryo expression (LCM): '252.252'
AT2G33040 ATP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '120.875'
Avg. expression score in LCM sample: '113.865'
Tissue used: 'full endosperm'
AT2G33040 ATP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33040 ATP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33040 ATP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33030 RLP25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33030 RLP25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.31592'
Avg. expression score in LCM sample: '4.48286'
Tissue used: 'full endosperm'
AT2G33030 RLP25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33030 RLP25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.76107'
Avg. expression score in LCM sample: '4.48286'
Tissue used: 'pure endosperm, no chalazal'
AT2G33030 RLP25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33030 RLP25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33020 RLP24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33020 RLP24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33020 RLP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.100465'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33020 RLP24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33020 RLP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.821341'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33020 RLP24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.808104'
Avg. embryo expression (LCM): '4.3955'
AT2G33010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.388906'
Avg. expression score in LCM sample: '1.46979'
Tissue used: 'pure endosperm, no chalazal'
AT2G33010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.167212'
Avg. expression score in LCM sample: '1.46979'
Tissue used: 'full endosperm'
AT2G33010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33006 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33006 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33006 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33006 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33006 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33006 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.6733'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'pure endosperm, no chalazal'
AT2G33000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.77347'
Avg. embryo expression (LCM): '3.50384'
AT2G33000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.0058'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'full endosperm'
AT2G33000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32990 GH9B8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.87302 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32990 GH9B8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.03325 x 10-1 20 17 54.05% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32990 GH9B8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32990 GH9B8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 1 4 42.86% 80.00% 7 5 TAIR8 Avg. embryo expression (dissected): '131.814'
Avg. embryo expression (LCM): '13.513'
AT2G32990 GH9B8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.73468 x 10-1 157 32 78 87 83.07% 52.73% 189 165 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.571607'
Avg. expression score for this sample: '3434.5'
Avg. expression score in LCM sample: '1934.94'
Tissue used: 'pure endosperm, no chalazal'
AT2G32990 GH9B8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.73552 x 10-1 164 37 79 78 81.59% 49.68% 201 157 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.571607'
Avg. expression score for this sample: '1724.25'
Avg. expression score in LCM sample: '1934.94'
Tissue used: 'full endosperm'
AT2G32980 AUG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '130.441'
Avg. expression score in LCM sample: '66.9784'
Tissue used: 'full endosperm'
AT2G32980 AUG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '71.5465'
Avg. embryo expression (LCM): '48.7524'
AT2G32980 AUG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32980 AUG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '84.86'
Avg. expression score in LCM sample: '66.9784'
Tissue used: 'pure endosperm, no chalazal'
AT2G32980 AUG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32980 AUG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 684 37 94.87% 721 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.59215 x 10-1 54 14 79.41% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.09233 x 10-1 58 11 48 55 84.06% 53.40% 69 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004236'
Avg. expression score for this sample: '48.7404'
Avg. expression score in LCM sample: '11.5232'
Tissue used: 'pure endosperm, no chalazal'
AT2G32970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.37297 x 10-1 64 59 25 12 52.03% 32.43% 123 37 TAIR8 Avg. embryo expression (dissected): '78.4133'
Avg. embryo expression (LCM): '34.7119'
AT2G32970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.231 x 10-3 316 74 133 279 81.03% 67.72% 390 412 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004236'
Avg. expression score for this sample: '131.66'
Avg. expression score in LCM sample: '11.5232'
Tissue used: 'full endosperm'
AT2G32970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-19 394 31 92.71% 425 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32960 PFA-DSP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.61538 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32960 PFA-DSP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G32960 PFA-DSP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.5671 0 1 3 2 0.00% 40.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.105723'
Avg. expression score for this sample: '5.25539'
Avg. expression score in LCM sample: '1.19053'
Tissue used: 'pure endosperm, no chalazal'
AT2G32960 PFA-DSP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.07411 x 10-1 8 5 12 7 61.54% 36.84% 13 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.105723'
Avg. expression score for this sample: '13.8096'
Avg. expression score in LCM sample: '1.19053'
Tissue used: 'full endosperm'
AT2G32960 PFA-DSP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.53659 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32960 PFA-DSP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32950 COP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-8 214 22 90.68% 236 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32950 COP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.99236 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32950 COP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.45308 x 10-1 84 40 28 100 67.74% 78.12% 124 128 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.131272'
Avg. expression score for this sample: '189.073'
Avg. expression score in LCM sample: '48.4737'
Tissue used: 'full endosperm'
AT2G32950 COP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 6 8 5 1 42.86% 16.67% 14 6 TAIR8 Avg. embryo expression (dissected): '112.228'
Avg. embryo expression (LCM): '61.851'
AT2G32950 COP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2831 x 10-2 121 24 83.45% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G32950 COP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.26767 x 10-1 21 5 9 14 80.77% 60.87% 26 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.131272'
Avg. expression score for this sample: '111.36'
Avg. expression score in LCM sample: '48.4737'
Tissue used: 'pure endosperm, no chalazal'
AT2G32940 AGO6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.57718 x 10-1 15 17 8 28 46.88% 77.78% 32 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.6195'
Avg. expression score in LCM sample: '18.7839'
Tissue used: 'pure endosperm, no chalazal'
AT2G32940 AGO6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.134 x 10-3 21 69 14 18 23.33% 56.25% 90 32 TAIR8 Avg. embryo expression (dissected): '37.7969'
Avg. embryo expression (LCM): '47.2956'
AT2G32940 AGO6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.00904 x 10-1 36 27 20 63 57.14% 75.90% 63 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.1227'
Avg. expression score in LCM sample: '18.7839'
Tissue used: 'full endosperm'
AT2G32940 AGO6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.30843 x 10-1 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'