Displaying data sets 108501 - 108600 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G33233 LCR49 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.44202 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33233 LCR49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.19784 x 10-1 72 12 33 30 85.71% 47.62% 84 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.483123'
Avg. expression score for this sample: '220.499'
Avg. expression score in LCM sample: '266.899'
Tissue used: 'pure endosperm, no chalazal'
AT2G33233 LCR49 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 2 0 75.00% 0.00% 4 2 TAIR8 Avg. embryo expression (dissected): '16.5258'
Avg. embryo expression (LCM): '0'
AT2G33233 LCR49 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33230 YUC7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.73504 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33230 YUC7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.65201 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33230 YUC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.54622 x 10-1 11 5 4 2 68.75% 33.33% 16 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766128'
Avg. expression score for this sample: '3.58479'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'full endosperm'
AT2G33230 YUC7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 1 3 1 83.33% 25.00% 6 4 TAIR8 Avg. embryo expression (dissected): '3.65018'
Avg. embryo expression (LCM): '0'
AT2G33230 YUC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766128'
Avg. expression score for this sample: '.399783'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'pure endosperm, no chalazal'
AT2G33230 YUC7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.76221 x 10-1 9 12 42.86% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.7 x 10-6 2427 1204 66.84% 3631 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.615 x 10-3 1488 548 700 1334 73.08% 65.59% 2036 2034 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.9e-10'
Avg. expression score for this sample: '2207.63'
Avg. expression score in LCM sample: '751.857'
Tissue used: 'pure endosperm, no chalazal'
AT2G33220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2645 368 87.79% 3013 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.56529 x 10-1 464 207 69.15% 671 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.3 x 10-6 1447 1115 272 293 56.48% 51.86% 2562 565 TAIR8 Avg. embryo expression (dissected): '2361.95'
Avg. embryo expression (LCM): '1337.97'
AT2G33220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8 x 10-9 1968 526 967 1871 78.91% 65.93% 2494 2838 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.9e-10'
Avg. expression score for this sample: '2122.33'
Avg. expression score in LCM sample: '751.857'
Tissue used: 'full endosperm'
AT2G33210 HSP60-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.52 x 10-4 290 107 267 704 73.05% 72.50% 397 971 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013902'
Avg. expression score for this sample: '173.246'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'full endosperm'
AT2G33210 HSP60-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0 x 10-30 2007 393 83.62% 2400 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33210 HSP60-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 372 201 178 386 64.92% 68.44% 573 564 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013902'
Avg. expression score for this sample: '189.606'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'pure endosperm, no chalazal'
AT2G33210 HSP60-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1084 1155 233 303 48.41% 56.53% 2239 536 TAIR8 Avg. embryo expression (dissected): '681.923'
Avg. embryo expression (LCM): '580.457'
AT2G33210 HSP60-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.01819 x 10-1 127 45 73.84% 172 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33210 HSP60-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4171 x 10-2 1323 649 67.09% 1972 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33205 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33205 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33205 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33205 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 2 4 50.00% 66.67% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.1488'
Avg. expression score in LCM sample: '29.3076'
Tissue used: 'full endosperm'
AT2G33205 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.825166'
Avg. embryo expression (LCM): '3.0015'
AT2G33205 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.25737'
Avg. expression score in LCM sample: '29.3076'
Tissue used: 'pure endosperm, no chalazal'
AT2G33200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.922141'
Avg. expression score in LCM sample: '10.4061'
Tissue used: 'pure endosperm, no chalazal'
AT2G33200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7251 x 10-2 9 15 37.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 4 66.67% 100.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.1792'
Avg. expression score in LCM sample: '10.4061'
Tissue used: 'full endosperm'
AT2G33200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 71 11 86.59% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.5486'
Avg. expression score in LCM sample: '8.80405'
Tissue used: 'full endosperm'
AT2G33180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '32.2509'
Avg. embryo expression (LCM): '45.123'
AT2G33180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.74443'
Avg. expression score in LCM sample: '8.80405'
Tissue used: 'pure endosperm, no chalazal'
AT2G33180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.28571 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '8.05819'
Avg. expression score in LCM sample: '3.30703'
Tissue used: 'pure endosperm, no chalazal'
AT2G33170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0606 x 10-2 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.2381 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '26.1998'
Avg. embryo expression (LCM): '20.684'
AT2G33170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 1 0 50.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '13.7793'
Avg. expression score in LCM sample: '3.30703'
Tissue used: 'full endosperm'
AT2G33160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.712765'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.75302 x 10-1 148 50 74.75% 198 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '1.3304'
Avg. embryo expression (LCM): '0'
AT2G33160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.63572 x 10-1 69 52 57.02% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33150 PKT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33150 PKT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33150 PKT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33150 PKT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1367.07'
Avg. expression score in LCM sample: '440.629'
Tissue used: 'full endosperm'
AT2G33150 PKT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '788.386'
Avg. embryo expression (LCM): '603.05'
AT2G33150 PKT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '679.216'
Avg. expression score in LCM sample: '440.629'
Tissue used: 'pure endosperm, no chalazal'
AT2G33140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33130 RALFL18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33130 RALFL18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.13315'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33130 RALFL18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33130 RALFL18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.12241'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33130 RALFL18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33130 RALFL18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33120 SAR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.64168 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33120 SAR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-7 67 4 94.37% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33120 SAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.80722 x 10-1 22 1 19 9 95.65% 32.14% 23 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.433469'
Avg. expression score for this sample: '268.467'
Avg. expression score in LCM sample: '162.765'
Tissue used: 'full endosperm'
AT2G33120 SAR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '129.529'
Avg. embryo expression (LCM): '88.111'
AT2G33120 SAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.29563 x 10-1 18 4 11 4 81.82% 26.67% 22 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.433469'
Avg. expression score for this sample: '216.831'
Avg. expression score in LCM sample: '162.765'
Tissue used: 'pure endosperm, no chalazal'
AT2G33120 SAR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.87986 x 10-1 12 11 52.17% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33110 VAMP723 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.01556 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33110 VAMP723 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '33.6281'
Avg. expression score in LCM sample: '4.27709'
Tissue used: 'pure endosperm, no chalazal'
AT2G33110 VAMP723 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.99862 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33110 VAMP723 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33110 VAMP723 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '22.2568'
Avg. embryo expression (LCM): '21.0231'
AT2G33110 VAMP723 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 4 0 5 33.33% 100.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '38.8634'
Avg. expression score in LCM sample: '4.27709'
Tissue used: 'full endosperm'
AT2G33100 CSLD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.72303 x 10-1 5 6 3 1 45.45% 25.00% 11 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523107'
Avg. expression score for this sample: '4.24833'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'full endosperm'
AT2G33100 CSLD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.52174 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33100 CSLD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523107'
Avg. expression score for this sample: '2.53278'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'pure endosperm, no chalazal'
AT2G33100 CSLD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '3.6631'
Avg. embryo expression (LCM): '1.9089'
AT2G33100 CSLD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33100 CSLD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6055 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.24253'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.38917'
Avg. embryo expression (LCM): '0'
AT2G33090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'