Displaying data sets 108401 - 108500 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G33385 arpc2b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33385 arpc2b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33380 RD20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33380 RD20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33380 RD20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.41758'
Avg. embryo expression (LCM): '0'
AT2G33380 RD20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.8612'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33380 RD20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '120.77'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33380 RD20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '602.31'
Avg. expression score in LCM sample: '151.433'
Tissue used: 'pure endosperm, no chalazal'
AT2G33370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '427.035'
Avg. expression score in LCM sample: '151.433'
Tissue used: 'full endosperm'
AT2G33370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1308.29'
Avg. embryo expression (LCM): '1655.45'
AT2G33360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 8 11 6 3 42.11% 33.33% 19 9 TAIR8 Avg. embryo expression (dissected): '243.97'
Avg. embryo expression (LCM): '121.278'
AT2G33360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.844 x 10-3 32 2 5 23 94.12% 82.14% 34 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003857'
Avg. expression score for this sample: '234.944'
Avg. expression score in LCM sample: '49.2233'
Tissue used: 'full endosperm'
AT2G33360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.17082 x 10-1 16 3 2 3 84.21% 60.00% 19 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003857'
Avg. expression score for this sample: '205.974'
Avg. expression score in LCM sample: '49.2233'
Tissue used: 'pure endosperm, no chalazal'
AT2G33360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.784 x 10-3 57 0 100.00% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-6 201 1 99.50% 202 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.08176 x 10-1 44 1 97.78% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '.728397'
AT2G33350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576471'
Avg. expression score for this sample: '.29592'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 5 0 0 3 100.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576471'
Avg. expression score for this sample: '1.1086'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33340 MAC3B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.705 x 10-3 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33340 MAC3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.25483 x 10-1 14 11 11 7 56.00% 38.89% 25 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.83357'
Avg. expression score for this sample: '203'
Avg. expression score in LCM sample: '62.9218'
Tissue used: 'pure endosperm, no chalazal'
AT2G33340 MAC3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.3005 x 10-1 57 24 24 54 70.37% 69.23% 81 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.83357'
Avg. expression score for this sample: '350.867'
Avg. expression score in LCM sample: '62.9218'
Tissue used: 'full endosperm'
AT2G33340 MAC3B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.143 x 10-3 75 14 84.27% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33340 MAC3B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.85 x 10-4 92 18 83.64% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33340 MAC3B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 17 2 4 43.33% 66.67% 30 6 TAIR8 Avg. embryo expression (dissected): '389.276'
Avg. embryo expression (LCM): '266.995'
AT2G33330 PDLP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 7 6 0 3 53.85% 100.00% 13 3 TAIR8 Avg. embryo expression (dissected): '62.0748'
Avg. embryo expression (LCM): '116.87'
AT2G33330 PDLP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.40508 x 10-1 17 4 13 23 80.95% 63.89% 21 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '72.4096'
Avg. expression score in LCM sample: '5.59991'
Tissue used: 'full endosperm'
AT2G33330 PDLP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33330 PDLP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.72548 x 10-1 7 4 4 1 63.64% 20.00% 11 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.3774'
Avg. expression score in LCM sample: '5.59991'
Tissue used: 'pure endosperm, no chalazal'
AT2G33330 PDLP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.53026 x 10-1 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33330 PDLP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 23 5 82.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.23526 x 10-1 32 4 88.89% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 2 2 60.00% 50.00% 5 4 TAIR8 Avg. embryo expression (dissected): '9.13134'
Avg. embryo expression (LCM): '6.84442'
AT2G33320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 3 9 11 84.21% 55.00% 19 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.052369'
Avg. expression score for this sample: '15.8973'
Avg. expression score in LCM sample: '17.1672'
Tissue used: 'pure endosperm, no chalazal'
AT2G33320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0084 25 1 3 15 96.15% 83.33% 26 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.052369'
Avg. expression score for this sample: '20.1781'
Avg. expression score in LCM sample: '17.1672'
Tissue used: 'full endosperm'
AT2G33320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33310 IAA13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33310 IAA13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '146.359'
Avg. expression score in LCM sample: '48.8118'
Tissue used: 'pure endosperm, no chalazal'
AT2G33310 IAA13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '466.147'
Avg. expression score in LCM sample: '48.8118'
Tissue used: 'full endosperm'
AT2G33310 IAA13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33310 IAA13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33310 IAA13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '248.468'
Avg. embryo expression (LCM): '213.169'
AT2G33300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33290 SUVH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5405 x 10-2 137 31 81.55% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33290 SUVH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.4 x 10-4 272 54 83.44% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33290 SUVH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 47 48 15 17 49.47% 53.12% 95 32 TAIR8 Avg. embryo expression (dissected): '154.995'
Avg. embryo expression (LCM): '91.3134'
AT2G33290 SUVH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.2987 x 10-2 67 39 17 95 63.21% 84.82% 106 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029974'
Avg. expression score for this sample: '135.002'
Avg. expression score in LCM sample: '63.495'
Tissue used: 'pure endosperm, no chalazal'
AT2G33290 SUVH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.94482 x 10-1 66 26 39 107 71.74% 73.29% 92 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029974'
Avg. expression score for this sample: '132.918'
Avg. expression score in LCM sample: '63.495'
Tissue used: 'full endosperm'
AT2G33290 SUVH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.81412 x 10-1 16 8 66.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.212657'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.977551'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.37374 x 10-1 15 28 34.88% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 33 1 97.06% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G33270 ACHT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.303685'
Avg. embryo expression (LCM): '0'
AT2G33270 ACHT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.91741'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G33270 ACHT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33270 ACHT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G33270 ACHT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33270 ACHT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.66667 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 1 1 62.50% 50.00% 8 2 TAIR8 Avg. embryo expression (dissected): '38.8819'
Avg. embryo expression (LCM): '27.8172'
AT2G33260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.310777'
Avg. expression score for this sample: '11.8688'
Avg. expression score in LCM sample: '4.49756'
Tissue used: 'pure endosperm, no chalazal'
AT2G33260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.82043 x 10-1 5 1 0 4 83.33% 100.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.310777'
Avg. expression score for this sample: '18.3339'
Avg. expression score in LCM sample: '4.49756'
Tissue used: 'full endosperm'
AT2G33260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.8461 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33255 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.96275 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 2 2 85.71% 50.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.135806'
Avg. expression score for this sample: '41.1151'
Avg. expression score in LCM sample: '23.8694'
Tissue used: 'pure endosperm, no chalazal'
AT2G33255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.47687 x 10-1 24 2 6 14 92.31% 70.00% 26 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.135806'
Avg. expression score for this sample: '66.8452'
Avg. expression score in LCM sample: '23.8694'
Tissue used: 'full endosperm'
AT2G33255 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.5387 x 10-1 16 5 76.19% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33255 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.13392 x 10-1 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33255 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 13 8 3 1 61.90% 25.00% 21 4 TAIR8 Avg. embryo expression (dissected): '117.324'
Avg. embryo expression (LCM): '116.029'
AT2G33250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5652 x 10-1 143 72 55 19 66.51% 25.68% 215 74 TAIR8 Avg. embryo expression (dissected): '359.94'
Avg. embryo expression (LCM): '264.873'
AT2G33250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.328 x 10-3 270 55 60 98 83.08% 62.03% 325 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000601'
Avg. expression score for this sample: '297.69'
Avg. expression score in LCM sample: '32.3942'
Tissue used: 'full endosperm'
AT2G33250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 27 9 75.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.1803 146 22 49 41 86.90% 45.56% 168 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000601'
Avg. expression score for this sample: '200.895'
Avg. expression score in LCM sample: '32.3942'
Tissue used: 'pure endosperm, no chalazal'
AT2G33250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8 x 10-16 162 168 49.09% 330 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-8 304 39 88.63% 343 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33240 XID endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33240 XID endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33240 XID embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '23.6123'
Avg. embryo expression (LCM): '29.5378'
AT2G33240 XID endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.94043'
Avg. expression score in LCM sample: '1.67556'
Tissue used: 'pure endosperm, no chalazal'
AT2G33240 XID endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.05653'
Avg. expression score in LCM sample: '1.67556'
Tissue used: 'full endosperm'
AT2G33240 XID endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33233 LCR49 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G33233 LCR49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.19784 x 10-1 72 12 33 30 85.71% 47.62% 84 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.483123'
Avg. expression score for this sample: '220.499'
Avg. expression score in LCM sample: '266.899'
Tissue used: 'pure endosperm, no chalazal'