Displaying data sets 10701 - 10800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G51680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 0 1 42.86% 100.00% 7 1 TAIR8 Avg. embryo expression (dissected): '60.3296'
Avg. embryo expression (LCM): '9.69522'
AT5G51680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1771 x 10-1 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.16391 x 10-1 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.86745'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.860926'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 1 1 62.50% 50.00% 8 2 TAIR8 Avg. embryo expression (dissected): '65.9468'
Avg. embryo expression (LCM): '30.0024'
AT5G51670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51660 CPSF160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.31245 x 10-1 23 13 10 30 63.89% 75.00% 36 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.126289'
Avg. expression score for this sample: '82.5317'
Avg. expression score in LCM sample: '83.9986'
Tissue used: 'pure endosperm, no chalazal'
AT5G51660 CPSF160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.11096 x 10-1 59 19 28 78 75.64% 73.58% 78 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.126289'
Avg. expression score for this sample: '96.8775'
Avg. expression score in LCM sample: '83.9986'
Tissue used: 'full endosperm'
AT5G51660 CPSF160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45576 x 10-1 55 61 13 8 47.41% 38.10% 116 21 TAIR8 Avg. embryo expression (dissected): '191.003'
Avg. embryo expression (LCM): '189.346'
AT5G51660 CPSF160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 20 7 74.07% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51660 CPSF160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.44651 x 10-1 147 38 79.46% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51660 CPSF160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.83654 x 10-1 71 23 75.53% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51640 YLS7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 1 1 83.33% 50.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284773'
Avg. expression score for this sample: '10.7574'
Avg. expression score in LCM sample: '.808385'
Tissue used: 'pure endosperm, no chalazal'
AT5G51640 YLS7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.55036 x 10-1 3 4 1 20 42.86% 95.24% 7 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284773'
Avg. expression score for this sample: '37.3246'
Avg. expression score in LCM sample: '.808385'
Tissue used: 'full endosperm'
AT5G51640 YLS7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 1 0.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '13.747'
Avg. embryo expression (LCM): '8.94171'
AT5G51640 YLS7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51640 YLS7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.2463 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51640 YLS7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.639 x 10-3 38 0 100.00% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 3 6 4 84.21% 40.00% 19 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.933186'
Avg. expression score for this sample: '11.4318'
Avg. expression score in LCM sample: '3.70387'
Tissue used: 'pure endosperm, no chalazal'
AT5G51630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.30062 x 10-1 134 31 68 57 81.21% 45.60% 165 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.933186'
Avg. expression score for this sample: '46.3253'
Avg. expression score in LCM sample: '3.70387'
Tissue used: 'full endosperm'
AT5G51630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 7 2 0 61.11% 0.00% 18 2 TAIR8 Avg. embryo expression (dissected): '14.2344'
Avg. embryo expression (LCM): '5.37507'
AT5G51630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0246 x 10-2 13 18 41.94% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.77932 x 10-1 23 16 58.97% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9 x 10-7 84 8 91.30% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '134.655'
Avg. expression score in LCM sample: '35.275'
Tissue used: 'pure endosperm, no chalazal'
AT5G51620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '298.717'
Avg. expression score in LCM sample: '35.275'
Tissue used: 'full endosperm'
AT5G51620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '168.061'
Avg. embryo expression (LCM): '100.469'
AT5G51620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.470485'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.331978'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.96049'
Avg. embryo expression (LCM): '4.609'
AT5G51610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51600 PLE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 34 24 16 44 58.62% 73.33% 58 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.935457'
Avg. expression score for this sample: '298.802'
Avg. expression score in LCM sample: '173.729'
Tissue used: 'pure endosperm, no chalazal'
AT5G51600 PLE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.20188 x 10-1 59 34 42 88 63.44% 67.69% 93 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.935457'
Avg. expression score for this sample: '255.092'
Avg. expression score in LCM sample: '173.729'
Tissue used: 'full endosperm'
AT5G51600 PLE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.78417 x 10-1 36 39 9 17 48.00% 65.38% 75 26 TAIR8 Avg. embryo expression (dissected): '296.326'
Avg. embryo expression (LCM): '221.684'
AT5G51600 PLE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.62101 x 10-1 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51600 PLE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.51055 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51600 PLE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.50525 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.7905'
Avg. expression score in LCM sample: '27.103'
Tissue used: 'pure endosperm, no chalazal'
AT5G51590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 0 0 0 7 100.00% 0 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.7302'
Avg. expression score in LCM sample: '27.103'
Tissue used: 'full endosperm'
AT5G51590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '194.756'
Avg. embryo expression (LCM): '222.94'
AT5G51590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.35243'
Avg. expression score in LCM sample: '1.54328'
Tissue used: 'pure endosperm, no chalazal'
AT5G51580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.03158'
Avg. expression score in LCM sample: '1.54328'
Tissue used: 'full endosperm'
AT5G51580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G51580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 2 1 100.00% 33.33% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.260002'
Avg. expression score for this sample: '627.265'
Avg. expression score in LCM sample: '571.852'
Tissue used: 'pure endosperm, no chalazal'
AT5G51570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9935 x 10-1 14 0 4 8 100.00% 66.67% 14 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.260002'
Avg. expression score for this sample: '485.977'
Avg. expression score in LCM sample: '571.852'
Tissue used: 'full endosperm'
AT5G51570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Avg. embryo expression (dissected): '360.273'
Avg. embryo expression (LCM): '316.991'
AT5G51570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.23314 x 10-1 26 14 65.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6732 x 10-2 28 0 100.00% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.0884'
Avg. expression score in LCM sample: '26.9266'
Tissue used: 'pure endosperm, no chalazal'
AT5G51560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.0997'
Avg. expression score in LCM sample: '26.9266'
Tissue used: 'full endosperm'
AT5G51560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '141.537'
Avg. embryo expression (LCM): '169.403'
AT5G51560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51550 EXL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8444 x 10-2 256 90 72 163 73.99% 69.36% 346 235 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.3e-06'
Avg. expression score for this sample: '540.139'
Avg. expression score in LCM sample: '123.801'
Tissue used: 'pure endosperm, no chalazal'
AT5G51550 EXL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5 x 10-5 425 135 204 536 75.89% 72.43% 560 740 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.3e-06'
Avg. expression score for this sample: '595.859'
Avg. expression score in LCM sample: '123.801'
Tissue used: 'full endosperm'
AT5G51550 EXL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.23129 x 10-1 341 418 56 89 44.93% 61.38% 759 145 TAIR8 Avg. embryo expression (dissected): '1103.95'
Avg. embryo expression (LCM): '695.607'
AT5G51550 EXL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 61 22 73.49% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51550 EXL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-5 181 28 86.60% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51550 EXL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 765 59 92.84% 824 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51545 LPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '290.06'
Avg. expression score in LCM sample: '56.0725'
Tissue used: 'pure endosperm, no chalazal'
AT5G51545 LPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '203.32'
Avg. expression score in LCM sample: '56.0725'
Tissue used: 'full endosperm'
AT5G51545 LPA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '470.953'
Avg. embryo expression (LCM): '249.803'
AT5G51545 LPA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51545 LPA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51545 LPA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372584'
Avg. expression score for this sample: '4.76497'
Avg. expression score in LCM sample: '1.29342'
Tissue used: 'pure endosperm, no chalazal'
AT5G51540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.23107 x 10-1 5 3 7 5 62.50% 41.67% 8 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372584'
Avg. expression score for this sample: '11.2639'
Avg. expression score in LCM sample: '1.29342'
Tissue used: 'full endosperm'
AT5G51540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 2 8 1 1 20.00% 50.00% 10 2 TAIR8 Avg. embryo expression (dissected): '30.8972'
Avg. embryo expression (LCM): '34.2598'
AT5G51540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9726 x 10-2 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 14 48.15% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.150355'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G51530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.502177'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G51530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.760004'
Avg. embryo expression (LCM): '.728397'
AT5G51530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G51530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'