| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G36500 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | TAIR8 |
Avg. embryo expression (dissected): '42.1085' Avg. embryo expression (LCM): '36.7966' |
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| AT2G36500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 2 | 2 | 2 | 75.00% | 50.00% | 8 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '92.3343' Avg. expression score in LCM sample: '1.60207' Tissue used: 'full endosperm' |
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| AT2G36500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.60504 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36500 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.02683 x 10-1 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.398' Avg. expression score in LCM sample: '1.60207' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36490 | DML1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.5 x 10-7 | 161 | 225 | 137 | 267 | 41.71% | 66.09% | 386 | 404 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.3e-14' Avg. expression score for this sample: '1304.47' Avg. expression score in LCM sample: '512.428' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G36490 | DML1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 419 | 58 | 87.84% | 477 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36490 | DML1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-19 | 156 | 20 | 88.64% | 176 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36490 | DML1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.29954 x 10-1 | 194 | 205 | 81 | 59 | 48.62% | 42.14% | 399 | 140 | TAIR8 |
Avg. embryo expression (dissected): '1321.1' Avg. embryo expression (LCM): '557.149' |
|||
| AT2G36490 | DML1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-18 | 108 | 7 | 93.91% | 115 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36490 | DML1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.0 x 10-9 | 383 | 355 | 452 | 708 | 51.90% | 61.03% | 738 | 1160 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.3e-14' Avg. expression score for this sample: '1557.82' Avg. expression score in LCM sample: '512.428' Tissue used: 'full endosperm' |
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| AT2G36485 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.34614 x 10-1 | 5 | 0 | 2 | 11 | 100.00% | 84.62% | 5 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.520195' Avg. expression score for this sample: '21.5646' Avg. expression score in LCM sample: '24.5014' Tissue used: 'full endosperm' |
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| AT2G36485 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36485 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36485 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.2381 x 10-1 | 1 | 4 | 0 | 0 | 20.00% | 5 | 0 | TAIR8 |
Avg. embryo expression (dissected): '20.4184' Avg. embryo expression (LCM): '10.4613' |
|||||
| AT2G36485 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.13117 x 10-1 | 18 | 1 | 94.74% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36485 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 1 | 2 | 0 | 80.00% | 0.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.520195' Avg. expression score for this sample: '19.0719' Avg. expression score in LCM sample: '24.5014' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G36480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.02148 x 10-1 | 44 | 11 | 19 | 44 | 80.00% | 69.84% | 55 | 63 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.049909' Avg. expression score for this sample: '84.6919' Avg. expression score in LCM sample: '51.0753' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36480 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.49 x 10-4 | 267 | 52 | 83.70% | 319 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36480 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.8587 x 10-2 | 27 | 49 | 16 | 11 | 35.53% | 40.74% | 76 | 27 | TAIR8 |
Avg. embryo expression (dissected): '104.051' Avg. embryo expression (LCM): '85.0467' |
||||
| AT2G36480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.29361 x 10-1 | 117 | 43 | 49 | 123 | 73.12% | 71.51% | 160 | 172 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.049909' Avg. expression score for this sample: '128.347' Avg. expression score in LCM sample: '51.0753' Tissue used: 'full endosperm' |
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| AT2G36480 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 20 | 7 | 74.07% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36480 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.1371 x 10-1 | 228 | 77 | 74.75% | 305 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36470 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.30947 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36470 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | TAIR8 |
Avg. embryo expression (dissected): '6.96871' Avg. embryo expression (LCM): '3.85548' |
||||
| AT2G36470 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.52958 x 10-1 | 6 | 5 | 54.55% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36470 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.2695 x 10-1 | 64 | 30 | 35 | 57 | 68.09% | 61.96% | 94 | 92 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.344692' Avg. expression score for this sample: '69.483' Avg. expression score in LCM sample: '33.4084' Tissue used: 'full endosperm' |
|||||
| AT2G36470 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36470 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.65764 x 10-1 | 32 | 20 | 26 | 32 | 61.54% | 55.17% | 52 | 58 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.344692' Avg. expression score for this sample: '62.7512' Avg. expression score in LCM sample: '33.4084' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36460 | FBA6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.18473 x 10-1 | 205 | 81 | 132 | 200 | 71.68% | 60.24% | 286 | 332 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.388287' Avg. expression score for this sample: '1784.46' Avg. expression score in LCM sample: '416.568' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36460 | FBA6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.5 x 10-12 | 540 | 113 | 82.70% | 653 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36460 | FBA6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.14655 x 10-1 | 275 | 74 | 141 | 242 | 78.80% | 63.19% | 349 | 383 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.388287' Avg. expression score for this sample: '1090.92' Avg. expression score in LCM sample: '416.568' Tissue used: 'full endosperm' |
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| AT2G36460 | FBA6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.1179 x 10-2 | 486 | 189 | 72.00% | 675 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36460 | FBA6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.86501 x 10-1 | 78 | 29 | 72.90% | 107 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36460 | FBA6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.8968 x 10-2 | 86 | 48 | 18 | 20 | 64.18% | 52.63% | 134 | 38 | TAIR8 |
Avg. embryo expression (dissected): '754.301' Avg. embryo expression (LCM): '77.3357' |
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| AT2G36450 | HRD | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G36450 | HRD | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G36450 | HRD | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36450 | HRD | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36450 | HRD | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36450 | HRD | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36440 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36440 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT2G36440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G36430 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.223256' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT2G36430 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36430 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36430 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.14124' Avg. embryo expression (LCM): '0' |
||||||
| AT2G36430 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36430 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36420 | TRM27 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.61679 x 10-1 | 48 | 24 | 31 | 42 | 66.67% | 57.53% | 72 | 73 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.095164' Avg. expression score for this sample: '138.523' Avg. expression score in LCM sample: '8.92163' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36420 | TRM27 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-9 | 182 | 35 | 83.87% | 217 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36420 | TRM27 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.76151 x 10-1 | 237 | 267 | 107 | 130 | 47.02% | 54.85% | 504 | 237 | TAIR8 |
Avg. embryo expression (dissected): '1505.79' Avg. embryo expression (LCM): '300.376' |
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| AT2G36420 | TRM27 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.47768 x 10-1 | 85 | 35 | 58 | 53 | 70.83% | 47.75% | 120 | 111 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.095164' Avg. expression score for this sample: '106.618' Avg. expression score in LCM sample: '8.92163' Tissue used: 'full endosperm' |
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| AT2G36420 | TRM27 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.945 x 10-3 | 19 | 2 | 90.48% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36420 | TRM27 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-5 | 28 | 1 | 96.55% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.37395 x 10-1 | 0 | 4 | 0.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36410 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37186 x 10-1 | 6 | 0 | 3 | 0 | 100.00% | 0.00% | 6 | 3 | TAIR8 |
Avg. embryo expression (dissected): '64.3768' Avg. embryo expression (LCM): '88.651' |
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| AT2G36410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 6 | 0 | 5 | 0 | 100.00% | 0.00% | 6 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.428308' Avg. expression score for this sample: '66.7419' Avg. expression score in LCM sample: '24.7072' Tissue used: 'full endosperm' |
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| AT2G36410 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.912 x 10-3 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.428308' Avg. expression score for this sample: '29.3537' Avg. expression score in LCM sample: '24.7072' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36400 | GRF3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '287.56' Avg. expression score in LCM sample: '187.031' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36400 | GRF3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36400 | GRF3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '103.392' Avg. expression score in LCM sample: '187.031' Tissue used: 'full endosperm' |
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| AT2G36400 | GRF3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36400 | GRF3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36400 | GRF3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '177.101' Avg. embryo expression (LCM): '234.644' |
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| AT2G36390 | SBE2.1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '458.548' Avg. embryo expression (LCM): '156.241' |
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| AT2G36390 | SBE2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '321.608' Avg. expression score in LCM sample: '192.984' Tissue used: 'full endosperm' |
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| AT2G36390 | SBE2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36390 | SBE2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36390 | SBE2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36390 | SBE2.1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '534.212' Avg. expression score in LCM sample: '192.984' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36380 | ABCG34 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.29569 x 10-1 | 7 | 3 | 11 | 9 | 70.00% | 45.00% | 10 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.702482' Avg. expression score for this sample: '54.1237' Avg. expression score in LCM sample: '16.7262' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36380 | ABCG34 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.6 x 10-5 | 96 | 17 | 84.96% | 113 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36380 | ABCG34 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.10454 x 10-1 | 14 | 13 | 51.85% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36380 | ABCG34 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 5 | 1 | 2 | 54.55% | 66.67% | 11 | 3 | TAIR8 |
Avg. embryo expression (dissected): '54.2358' Avg. embryo expression (LCM): '47.6347' |
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| AT2G36380 | ABCG34 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.16325 x 10-1 | 16 | 13 | 55.17% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G36380 | ABCG34 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 71 | 25 | 47 | 70 | 73.96% | 59.83% | 96 | 117 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.702482' Avg. expression score for this sample: '262.197' Avg. expression score in LCM sample: '16.7262' Tissue used: 'full endosperm' |
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| AT2G36370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.82043 x 10-1 | 4 | 0 | 1 | 5 | 100.00% | 83.33% | 4 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.134614' Avg. expression score for this sample: '44.8412' Avg. expression score in LCM sample: '44.9021' Tissue used: 'full endosperm' |
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| AT2G36370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.9699 x 10-2 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36370 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '80.5958' Avg. embryo expression (LCM): '33.6821' |
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| AT2G36370 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 1 | 91.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.23077 x 10-1 | 1 | 0 | 1 | 6 | 100.00% | 85.71% | 1 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.134614' Avg. expression score for this sample: '107.18' Avg. expression score in LCM sample: '44.9021' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.4453 x 10-1 | 34 | 11 | 15 | 27 | 75.56% | 64.29% | 45 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.13796' Avg. expression score for this sample: '36.3668' Avg. expression score in LCM sample: '40.1253' Tissue used: 'pure endosperm, no chalazal' |
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| AT2G36360 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.24 x 10-4 | 112 | 12 | 90.32% | 124 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36360 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.69362 x 10-1 | 14 | 20 | 5 | 5 | 41.18% | 50.00% | 34 | 10 | TAIR8 |
Avg. embryo expression (dissected): '42.8321' Avg. embryo expression (LCM): '29.6006' |
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| AT2G36360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.08288 x 10-1 | 58 | 18 | 21 | 60 | 76.32% | 74.07% | 76 | 81 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.13796' Avg. expression score for this sample: '59.9134' Avg. expression score in LCM sample: '40.1253' Tissue used: 'full endosperm' |
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| AT2G36360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 24 | 8 | 75.00% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8142 x 10-1 | 82 | 42 | 66.13% | 124 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G36355 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36355 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '86.2957' Avg. embryo expression (LCM): '28.4452' |
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| AT2G36355 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G36355 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '68.7449' Avg. expression score in LCM sample: '19.0338' Tissue used: 'full endosperm' |