GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G174790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	0	0	100.00%		9	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G174790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G174785	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32645 x 10^-2	60	81	63	84	42.55%	57.14%	141	147	RefGen V2	χ2 p-value for B73 x Mo17: '.0769742' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G174785	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.254579 x 10^-1	32	25	17	52	56.14%	75.36%	57	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0918159' χ2 p-value for Mo17 x B73: '.1254579' Biased in favor of strain: ''
GRMZM2G174784	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.34 x 10^-14	454	100	188	141	81.95%	42.86%	554	329	RefGen V2	χ2 p-value for B73 x Mo17: '2.34e-14' χ2 p-value for Mo17 x B73: '5.13e-20' Biased in favor of strain: 'B73'
GRMZM2G174784	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81 x 10^-5	105	31	69	27	77.21%	28.12%	136	96	RefGen V2	χ2 p-value for B73 x Mo17: '2.22e-10' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: 'B73'
GRMZM2G174782	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	9	2	7	43.75%	77.78%	16	9	RefGen V2	χ2 p-value for B73 x Mo17: '.6170751' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: ''
GRMZM2G174782	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	2	13	50.00%	86.67%	6	15	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.1003483' Biased in favor of strain: ''
GRMZM2G174766	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52 x 10^-10	82	0	53	5	100.00%	8.62%	82	58	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-10' χ2 p-value for Mo17 x B73: '6.75e-21' Biased in favor of strain: 'B73'
GRMZM2G174766	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	8	3	5	0.00%	62.50%	8	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G174757	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	3	0	40.00%	0.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G174757	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	3	66.67%	100.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G174741	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.73936 x 10^-2	1412	630	836	1380	69.15%	62.27%	2042	2216	RefGen V2	χ2 p-value for B73 x Mo17: '.0173936' χ2 p-value for Mo17 x B73: '.0000115' Biased in favor of strain: ''
GRMZM2G174741	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.58755 x 10^-2	726	505	619	537	58.98%	46.45%	1231	1156	RefGen V2	χ2 p-value for B73 x Mo17: '3.00e-10' χ2 p-value for Mo17 x B73: '.0158755' Biased in favor of strain: 'B73'
GRMZM2G174738	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.694171 x 10^-1	13	11	19	18	54.17%	48.65%	24	37	RefGen V2	χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: ''
GRMZM2G174738	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.00502 x 10^-1	21	11	21	20	65.62%	48.78%	32	41	RefGen V2	χ2 p-value for B73 x Mo17: '.900502' χ2 p-value for Mo17 x B73: '.0151199' Biased in favor of strain: ''
GRMZM2G174736	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.010638 x 10^-1	88	51	63	93	63.31%	59.62%	139	156	RefGen V2	χ2 p-value for B73 x Mo17: '.4010638' χ2 p-value for Mo17 x B73: '.0617261' Biased in favor of strain: ''
GRMZM2G174736	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.631659 x 10^-1	150	153	167	129	49.50%	43.58%	303	296	RefGen V2	χ2 p-value for B73 x Mo17: '.8631659' χ2 p-value for Mo17 x B73: '.0271952' Biased in favor of strain: ''
GRMZM2G174732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.319755 x 10^-1	67	16	30	38	80.72%	55.88%	83	68	RefGen V2	χ2 p-value for B73 x Mo17: '2.17e-08' χ2 p-value for Mo17 x B73: '.3319755' Biased in favor of strain: ''
GRMZM2G174732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0166 x 10^-3	219	70	142	144	75.78%	50.35%	289	286	RefGen V2	χ2 p-value for B73 x Mo17: '.0010166' χ2 p-value for Mo17 x B73: '4.81e-09' Biased in favor of strain: 'B73'
GRMZM2G174730	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.88 x 10^-9	654	204	444	547	76.22%	55.20%	858	991	RefGen V2	χ2 p-value for B73 x Mo17: '2.88e-09' χ2 p-value for Mo17 x B73: '1.87e-14' Biased in favor of strain: 'B73'
GRMZM2G174730	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.67 x 10^-5	536	404	497	261	57.02%	34.43%	940	758	RefGen V2	χ2 p-value for B73 x Mo17: '.0000167' χ2 p-value for Mo17 x B73: '1.02e-17' Biased in favor of strain: 'B73'
GRMZM2G174719	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.657123 x 10^-1	10	4	7	4	71.43%	36.36%	14	11	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: ''
GRMZM2G174719	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.110703 x 10^-1	10	3	11	24	76.92%	68.57%	13	35	RefGen V2	χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.8110703' Biased in favor of strain: ''
GRMZM2G174708	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G174708	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06 x 10^-7	20	69	13	103	22.47%	88.79%	89	116	RefGen V2	χ2 p-value for B73 x Mo17: '2.06e-07' χ2 p-value for Mo17 x B73: '6.47e-17' Biased in favor of strain: 'Mo17'
GRMZM2G174696	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.59703 x 10^-2	288	233	240	183	55.28%	43.26%	521	423	RefGen V2	χ2 p-value for B73 x Mo17: '.0159703' χ2 p-value for Mo17 x B73: '.005581' Biased in favor of strain: 'B73'
GRMZM2G174696	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.913509 x 10^-1	234	108	202	270	68.42%	57.20%	342	472	RefGen V2	χ2 p-value for B73 x Mo17: '.4913509' χ2 p-value for Mo17 x B73: '.0000129' Biased in favor of strain: ''
GRMZM2G174680	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	5	0	100.00%	0.00%	9	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G174680	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	0	5	0	100.00%	0.00%	12	5	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G174675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	1	1	33.33%	50.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G174675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	0	100.00%	0.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G174669	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.58 x 10^-18	567	123	228	177	82.17%	43.70%	690	405	RefGen V2	χ2 p-value for B73 x Mo17: '5.58e-18' χ2 p-value for Mo17 x B73: '1.09e-22' Biased in favor of strain: 'B73'
GRMZM2G174669	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.92 x 10^-14	323	106	217	87	75.29%	28.62%	429	304	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-25' χ2 p-value for Mo17 x B73: '8.92e-14' Biased in favor of strain: 'B73'
GRMZM2G174667	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.316146 x 10^-1	53	28	43	49	65.43%	53.26%	81	92	RefGen V2	χ2 p-value for B73 x Mo17: '.0054732' χ2 p-value for Mo17 x B73: '.5316146' Biased in favor of strain: ''
GRMZM2G174667	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.171022 x 10^-1	50	22	13	33	69.44%	71.74%	72	46	RefGen V2	χ2 p-value for B73 x Mo17: '.6171022' χ2 p-value for Mo17 x B73: '.4655124' Biased in favor of strain: ''
GRMZM2G174621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	5	0	3	37.50%	100.00%	8	3	RefGen V2	χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G174621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	1	0	0.00%	0.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G174619	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.92 x 10^-12	421	240	445	234	63.69%	34.46%	661	679	RefGen V2	χ2 p-value for B73 x Mo17: '1.92e-12' χ2 p-value for Mo17 x B73: '5.61e-16' Biased in favor of strain: 'B73'
GRMZM2G174619	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.071 x 10^-4	367	94	225	332	79.61%	59.61%	461	557	RefGen V2	χ2 p-value for B73 x Mo17: '3.75e-09' χ2 p-value for Mo17 x B73: '.0004071' Biased in favor of strain: 'B73'
GRMZM2G174615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G174615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	1	3	0.00%	75.00%	5	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G174610	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.827331 x 10^-1	38	46	32	47	45.24%	59.49%	84	79	RefGen V2	χ2 p-value for B73 x Mo17: '.3827331' χ2 p-value for Mo17 x B73: '.0914819' Biased in favor of strain: ''
GRMZM2G174610	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.159715 x 10^-1	61	35	40	67	63.54%	62.62%	96	107	RefGen V2	χ2 p-value for B73 x Mo17: '.5159715' χ2 p-value for Mo17 x B73: '.3741846' Biased in favor of strain: ''
GRMZM2G174598	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	6	0	1	57.14%	100.00%	14	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4496797' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G174598	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	12814	5052	15558	5728	71.72%	26.91%	17866	21286	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G174596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	528	210	575	228	71.54%	28.39%	738	803	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-31' χ2 p-value for Mo17 x B73: '1.78e-34' Biased in favor of strain: 'B73'
GRMZM2G174596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.31075 x 10^-2	185	67	174	102	73.41%	36.96%	252	276	RefGen V2	χ2 p-value for B73 x Mo17: '.0231075' χ2 p-value for Mo17 x B73: '1.18e-25' Biased in favor of strain: ''
GRMZM2G174589	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.072228 x 10^-1	2145	1046	938	1629	67.22%	63.46%	3191	2567	RefGen V2	χ2 p-value for B73 x Mo17: '.5072228' χ2 p-value for Mo17 x B73: '.0005664' Biased in favor of strain: ''
GRMZM2G174589	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.08 x 10^-20	1739	1239	1470	979	58.39%	39.98%	2978	2449	RefGen V2	χ2 p-value for B73 x Mo17: '5.08e-20' χ2 p-value for Mo17 x B73: '3.35e-23' Biased in favor of strain: 'B73'
GRMZM2G174572	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.132534 x 10^-1	65	56	73	52	53.72%	41.60%	121	125	RefGen V2	χ2 p-value for B73 x Mo17: '.4132534' χ2 p-value for Mo17 x B73: '.0603405' Biased in favor of strain: ''
GRMZM2G174572	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.453734 x 10^-1	44	27	20	47	61.97%	70.15%	71	67	RefGen V2	χ2 p-value for B73 x Mo17: '.4013436' χ2 p-value for Mo17 x B73: '.5453734' Biased in favor of strain: ''
GRMZM2G174570	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.52073 x 10^-2	169	118	123	190	58.89%	60.70%	287	313	RefGen V2	χ2 p-value for B73 x Mo17: '.0051641' χ2 p-value for Mo17 x B73: '.0252073' Biased in favor of strain: ''
GRMZM2G174570	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04 x 10^-8	209	102	159	72	67.20%	31.17%	311	231	RefGen V2	χ2 p-value for B73 x Mo17: '1.30e-09' χ2 p-value for Mo17 x B73: '1.04e-08' Biased in favor of strain: 'B73'
GRMZM2G174568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.685426 x 10^-1	346	380	321	322	47.66%	50.08%	726	643	RefGen V2	χ2 p-value for B73 x Mo17: '.2069998' χ2 p-value for Mo17 x B73: '.9685426' Biased in favor of strain: ''
GRMZM2G174568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.044824 x 10^-1	445	204	289	325	68.57%	52.93%	649	614	RefGen V2	χ2 p-value for B73 x Mo17: '.3044824' χ2 p-value for Mo17 x B73: '5.21e-13' Biased in favor of strain: ''
GRMZM2G174558	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48 x 10^-5	141	32	120	101	81.50%	45.70%	173	221	RefGen V2	χ2 p-value for B73 x Mo17: '.0000348' χ2 p-value for Mo17 x B73: '3.80e-11' Biased in favor of strain: 'B73'
GRMZM2G174558	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.77149 x 10^-2	73	28	32	18	72.28%	36.00%	101	50	RefGen V2	χ2 p-value for B73 x Mo17: '7.55e-06' χ2 p-value for Mo17 x B73: '.0477149' Biased in favor of strain: 'B73'
GRMZM2G174554	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	714	204	702	286	77.78%	28.95%	918	988	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G174554	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.4929 x 10^-3	186	64	133	125	74.40%	48.45%	250	258	RefGen V2	χ2 p-value for B73 x Mo17: '.0094929' χ2 p-value for Mo17 x B73: '5.39e-10' Biased in favor of strain: 'B73'
GRMZM2G174537	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.17304 x 10^-1	13	12	8	11	52.00%	57.89%	25	19	RefGen V2	χ2 p-value for B73 x Mo17: '.1197881' χ2 p-value for Mo17 x B73: '.417304' Biased in favor of strain: ''
GRMZM2G174537	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	3	1	4	70.00%	80.00%	10	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G174511	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.1802 x 10^-3	87	51	99	32	63.04%	24.43%	138	131	RefGen V2	χ2 p-value for B73 x Mo17: '.0021802' χ2 p-value for Mo17 x B73: '4.80e-09' Biased in favor of strain: 'B73'
GRMZM2G174511	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.17304 x 10^-1	18	6	8	11	75.00%	57.89%	24	19	RefGen V2	χ2 p-value for B73 x Mo17: '.3864874' χ2 p-value for Mo17 x B73: '.417304' Biased in favor of strain: ''
GRMZM2G174481	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7868 x 10^-3	62	12	45	34	83.78%	43.04%	74	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0017868' χ2 p-value for Mo17 x B73: '8.38e-06' Biased in favor of strain: 'B73'
GRMZM2G174481	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.51016 x 10^-1	852	827	691	698	50.74%	50.25%	1679	1389	RefGen V2	χ2 p-value for B73 x Mo17: '.5417829' χ2 p-value for Mo17 x B73: '.851016' Biased in favor of strain: ''
GRMZM2G174479	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7 x 10^-5	730	417	537	405	63.64%	42.99%	1147	942	RefGen V2	χ2 p-value for B73 x Mo17: '2.42e-20' χ2 p-value for Mo17 x B73: '.000017' Biased in favor of strain: 'B73'
GRMZM2G174479	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.87 x 10^-14	778	220	404	460	77.96%	53.24%	998	864	RefGen V2	χ2 p-value for B73 x Mo17: '3.87e-14' χ2 p-value for Mo17 x B73: '5.69e-17' Biased in favor of strain: 'B73'
GRMZM2G174458	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.966538 x 10^-1	177	60	113	216	74.68%	65.65%	237	329	RefGen V2	χ2 p-value for B73 x Mo17: '.0088438' χ2 p-value for Mo17 x B73: '.6966538' Biased in favor of strain: ''
GRMZM2G174458	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.784817 x 10^-1	215	139	194	191	60.73%	49.61%	354	385	RefGen V2	χ2 p-value for B73 x Mo17: '.0000536' χ2 p-value for Mo17 x B73: '.8784817' Biased in favor of strain: ''
GRMZM2G174444	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.02 x 10^-6	1006	726	912	732	58.08%	44.53%	1732	1644	RefGen V2	χ2 p-value for B73 x Mo17: '1.72e-11' χ2 p-value for Mo17 x B73: '9.02e-06' Biased in favor of strain: 'B73'
GRMZM2G174444	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.22 x 10^-9	1292	434	680	1007	74.86%	59.69%	1726	1687	RefGen V2	χ2 p-value for B73 x Mo17: '5.34e-13' χ2 p-value for Mo17 x B73: '1.22e-09' Biased in favor of strain: 'B73'
GRMZM2G174427	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.459748 x 10^-1	29	12	17	36	70.73%	67.92%	41	53	RefGen V2	χ2 p-value for B73 x Mo17: '.5808599' χ2 p-value for Mo17 x B73: '.8459748' Biased in favor of strain: ''
GRMZM2G174427	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.888444 x 10^-1	19	13	26	7	59.38%	21.21%	32	33	RefGen V2	χ2 p-value for B73 x Mo17: '.2888444' χ2 p-value for Mo17 x B73: '.0009414' Biased in favor of strain: ''
GRMZM2G174396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	29	387	24	332	6.97%	93.26%	416	356	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G174396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.88 x 10^-12	6	68	54	288	8.11%	84.21%	74	342	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-26' χ2 p-value for Mo17 x B73: '5.88e-12' Biased in favor of strain: 'Mo17'
GRMZM2G174343	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0286 x 10^-3	146	43	100	46	77.25%	31.51%	189	146	RefGen V2	χ2 p-value for B73 x Mo17: '.0020286' χ2 p-value for Mo17 x B73: '2.02e-19' Biased in favor of strain: 'B73'
GRMZM2G174343	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24 x 10^-24	351	127	500	121	73.43%	19.48%	478	621	RefGen V2	χ2 p-value for B73 x Mo17: '1.24e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G174335	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.65282 x 10^-2	76	51	73	46	59.84%	38.66%	127	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0265282' χ2 p-value for Mo17 x B73: '.0133204' Biased in favor of strain: 'B73'
GRMZM2G174335	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.1989 x 10^-3	187	53	89	116	77.92%	56.59%	240	205	RefGen V2	χ2 p-value for B73 x Mo17: '.0002181' χ2 p-value for Mo17 x B73: '.0021989' Biased in favor of strain: 'B73'
GRMZM2G174315	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1198	247	665	604	82.91%	47.60%	1445	1269	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G174315	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.45 x 10^-7	690	363	508	358	65.53%	41.34%	1053	866	RefGen V2	χ2 p-value for B73 x Mo17: '6.98e-24' χ2 p-value for Mo17 x B73: '3.45e-07' Biased in favor of strain: 'B73'
GRMZM2G174310	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.75896 x 10^-1	25	82	21	20	23.36%	48.78%	107	41	RefGen V2	χ2 p-value for B73 x Mo17: '3.58e-08' χ2 p-value for Mo17 x B73: '.875896' Biased in favor of strain: ''
GRMZM2G174310	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	2		50.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G174286	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.596839 x 10^-1	18	12	5	11	60.00%	68.75%	30	16	RefGen V2	χ2 p-value for B73 x Mo17: '.4385612' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: ''
GRMZM2G174286	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.171851 x 10^-1	21	12	19	3	63.64%	13.64%	33	22	RefGen V2	χ2 p-value for B73 x Mo17: '.1171851' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: ''
GRMZM2G174284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.23 x 10^-15	331	135	289	126	71.03%	30.36%	466	415	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-19' χ2 p-value for Mo17 x B73: '1.23e-15' Biased in favor of strain: 'B73'
GRMZM2G174284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.11 x 10^-11	421	103	211	178	80.34%	45.76%	524	389	RefGen V2	χ2 p-value for B73 x Mo17: '3.11e-11' χ2 p-value for Mo17 x B73: '2.18e-18' Biased in favor of strain: 'B73'
GRMZM2G174274	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.63512 x 10^-2	2	8	1	16	20.00%	94.12%	10	17	RefGen V2	χ2 p-value for B73 x Mo17: '.001745' χ2 p-value for Mo17 x B73: '.0163512' Biased in favor of strain: ''
GRMZM2G174274	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	2	5	66.67%	71.43%	6	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G174249	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.72 x 10^-9	41	2	52	2	95.35%	3.70%	43	54	RefGen V2	χ2 p-value for B73 x Mo17: '2.72e-09' χ2 p-value for Mo17 x B73: '1.02e-11' Biased in favor of strain: 'B73'
GRMZM2G174249	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.57 x 10^-7	55	0	54	13	100.00%	19.40%	55	67	RefGen V2	χ2 p-value for B73 x Mo17: '1.57e-07' χ2 p-value for Mo17 x B73: '2.27e-16' Biased in favor of strain: 'B73'
GRMZM2G174236	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.101573 x 10^-1	218	95	121	256	69.65%	67.90%	313	377	RefGen V2	χ2 p-value for B73 x Mo17: '.2631295' χ2 p-value for Mo17 x B73: '.6101573' Biased in favor of strain: ''
GRMZM2G174236	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-10	526	318	473	294	62.32%	38.33%	844	767	RefGen V2	χ2 p-value for B73 x Mo17: '8.09e-13' χ2 p-value for Mo17 x B73: '1.02e-10' Biased in favor of strain: 'B73'
GRMZM2G174221	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.84 x 10^-6	274	176	277	147	60.89%	34.67%	450	424	RefGen V2	χ2 p-value for B73 x Mo17: '3.84e-06' χ2 p-value for Mo17 x B73: '2.73e-10' Biased in favor of strain: 'B73'
GRMZM2G174221	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.39 x 10^-7	128	123	120	81	51.00%	40.30%	251	201	RefGen V2	χ2 p-value for B73 x Mo17: '1.39e-07' χ2 p-value for Mo17 x B73: '2.19e-15' Biased in favor of strain: ''
GRMZM2G174204	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	2	0	100.00%	0.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G174204	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	6	0	100.00%	0.00%	9	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G174202	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.49 x 10^-16	407	173	389	193	70.17%	33.16%	580	582	RefGen V2	χ2 p-value for B73 x Mo17: '2.57e-22' χ2 p-value for Mo17 x B73: '4.49e-16' Biased in favor of strain: 'B73'
GRMZM2G174202	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.75 x 10^-5	212	49	146	182	81.23%	55.49%	261	328	RefGen V2	χ2 p-value for B73 x Mo17: '6.05e-07' χ2 p-value for Mo17 x B73: '.0000175' Biased in favor of strain: 'B73'

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