Displaying data sets 105501 - 105600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G37510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '55.5699'
Avg. embryo expression (LCM): '86.1644'
AT2G37510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.4986'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G37500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.20231 x 10-1 37 14 31 69 72.55% 69.00% 51 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '52.9483'
Avg. expression score in LCM sample: '12.3903'
Tissue used: 'full endosperm'
AT2G37500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 19 23 2 4 45.24% 66.67% 42 6 TAIR8 Avg. embryo expression (dissected): '143.956'
Avg. embryo expression (LCM): '105.166'
AT2G37500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.40963 x 10-1 11 13 4 9 45.83% 69.23% 24 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '66.3712'
Avg. expression score in LCM sample: '12.3903'
Tissue used: 'pure endosperm, no chalazal'
AT2G37500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.97 x 10-4 39 3 92.86% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.38 x 10-3 87 16 84.47% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1573 x 10-2 61 3 95.31% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.56655 x 10-1 32 3 91.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 5 3 3 50.00% 50.00% 10 6 TAIR8 Avg. embryo expression (dissected): '28.8061'
Avg. embryo expression (LCM): '14.7061'
AT2G37480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6859 x 10-2 13 0 4 23 100.00% 85.19% 13 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10401'
Avg. expression score for this sample: '47.2653'
Avg. expression score in LCM sample: '31.9533'
Tissue used: 'full endosperm'
AT2G37480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.99239 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.37428 x 10-1 10 7 1 1 58.82% 50.00% 17 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10401'
Avg. expression score for this sample: '25.4489'
Avg. expression score in LCM sample: '31.9533'
Tissue used: 'pure endosperm, no chalazal'
AT2G37478 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.77123 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37478 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9376 x 10-1 31 8 79.49% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37478 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.82 x 10-3 45 4 91.84% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37478 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 5 9 13 75.00% 59.09% 20 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.879595'
Avg. expression score for this sample: '410.744'
Avg. expression score in LCM sample: '162.221'
Tissue used: 'pure endosperm, no chalazal'
AT2G37478 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.41132 x 10-1 16 9 8 25 64.00% 75.76% 25 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.879595'
Avg. expression score for this sample: '468.517'
Avg. expression score in LCM sample: '162.221'
Tissue used: 'full endosperm'
AT2G37478 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 10 2 0 50.00% 0.00% 20 2 TAIR8 Avg. embryo expression (dissected): '332.625'
Avg. embryo expression (LCM): '205.81'
AT2G37470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '53.5145'
Avg. embryo expression (LCM): '205.848'
AT2G37470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.7476'
Avg. expression score in LCM sample: '12.1699'
Tissue used: 'full endosperm'
AT2G37470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.7931'
Avg. expression score in LCM sample: '12.1699'
Tissue used: 'pure endosperm, no chalazal'
AT2G37470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37460 UMAMIT12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37460 UMAMIT12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37460 UMAMIT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '918.955'
Avg. expression score in LCM sample: '296.398'
Tissue used: 'pure endosperm, no chalazal'
AT2G37460 UMAMIT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3826.01'
Avg. expression score in LCM sample: '296.398'
Tissue used: 'full endosperm'
AT2G37460 UMAMIT12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '62.1902'
Avg. embryo expression (LCM): '6.09091'
AT2G37460 UMAMIT12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37450 UMAMIT13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37450 UMAMIT13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.63956'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G37450 UMAMIT13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37450 UMAMIT13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37450 UMAMIT13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '39.2737'
Avg. embryo expression (LCM): '41.5563'
AT2G37450 UMAMIT13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.86362'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G37440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.34475'
Avg. expression score in LCM sample: '1.58737'
Tissue used: 'full endosperm'
AT2G37440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.91854'
Avg. embryo expression (LCM): '2.03449'
AT2G37440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.67248'
Avg. expression score in LCM sample: '1.58737'
Tissue used: 'pure endosperm, no chalazal'
AT2G37435 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.370006'
Avg. expression score in LCM sample: '4.2477'
Tissue used: 'pure endosperm, no chalazal'
AT2G37435 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37435 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37435 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G37435 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.482333'
Avg. expression score in LCM sample: '4.2477'
Tissue used: 'full endosperm'
AT2G37435 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37430 ZAT11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37430 ZAT11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37430 ZAT11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37430 ZAT11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G37430 ZAT11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.192766'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G37430 ZAT11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G37420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3381 x 10-2 55 93 28 16 37.16% 36.36% 148 44 TAIR8 Avg. embryo expression (dissected): '107.845'
Avg. embryo expression (LCM): '73.9826'
AT2G37420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.64196 x 10-1 68 31 73 122 68.69% 62.56% 99 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.402864'
Avg. expression score for this sample: '49.0751'
Avg. expression score in LCM sample: '56.8662'
Tissue used: 'full endosperm'
AT2G37420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.31031 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.30386 x 10-1 31 26 9 20 54.39% 68.97% 57 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.402864'
Avg. expression score for this sample: '47.3609'
Avg. expression score in LCM sample: '56.8662'
Tissue used: 'pure endosperm, no chalazal'
AT2G37420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.62628 x 10-1 150 83 64.38% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2376 x 10-2 207 158 56.71% 365 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37410 TIM17-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-23 0 115 0.00% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37410 TIM17-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 137 0 100.00% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37410 TIM17-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3467 x 10-1 30 0 29 0 100.00% 0.00% 30 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.9e-08'
Avg. expression score for this sample: '3841.39'
Avg. expression score in LCM sample: '889.474'
Tissue used: 'pure endosperm, no chalazal'
AT2G37410 TIM17-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-7 94 0 131 0 100.00% 0.00% 94 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.9e-08'
Avg. expression score for this sample: '2951.39'
Avg. expression score in LCM sample: '889.474'
Tissue used: 'full endosperm'
AT2G37410 TIM17-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.94 x 10-4 46 0 10 0 100.00% 0.00% 46 10 TAIR8 Avg. embryo expression (dissected): '6519.77'
Avg. embryo expression (LCM): '3375.66'
AT2G37410 TIM17-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-7 0 29 0.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0829 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 0 75.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '527.728'
Avg. expression score in LCM sample: '156.768'
Tissue used: 'pure endosperm, no chalazal'
AT2G37400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0924 x 10-2 27 2 93.10% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.39731 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 4 8 1 0 33.33% 0.00% 12 1 TAIR8 Avg. embryo expression (dissected): '2044.89'
Avg. embryo expression (LCM): '2326.41'
AT2G37400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 8 1 7 55.56% 87.50% 18 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '726.117'
Avg. expression score in LCM sample: '156.768'
Tissue used: 'full endosperm'
AT2G37390 NAKR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.93407 x 10-1 118 54 54 58 68.60% 51.79% 172 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224404'
Avg. expression score for this sample: '79.2795'
Avg. expression score in LCM sample: '8.39251'
Tissue used: 'full endosperm'
AT2G37390 NAKR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.1046 x 10-2 111 75 20 28 59.68% 58.33% 186 48 TAIR8 Avg. embryo expression (dissected): '136.808'
Avg. embryo expression (LCM): '58.3848'
AT2G37390 NAKR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.70366 x 10-1 22 7 75.86% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37390 NAKR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37390 NAKR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.39945 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37390 NAKR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.72272 x 10-1 76 42 29 50 64.41% 63.29% 118 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224404'
Avg. expression score for this sample: '64.4294'
Avg. expression score in LCM sample: '8.39251'
Tissue used: 'pure endosperm, no chalazal'
AT2G37380 MAKR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.58708'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'pure endosperm, no chalazal'
AT2G37380 MAKR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37380 MAKR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37380 MAKR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 6 5 0 2 54.55% 100.00% 11 2 TAIR8 Avg. embryo expression (dissected): '35.5291'
Avg. embryo expression (LCM): '40.3507'
AT2G37380 MAKR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.53952'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'full endosperm'
AT2G37380 MAKR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 103 109 48.58% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 18 25.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.893003'
Avg. expression score in LCM sample: '8.86284'
Tissue used: 'pure endosperm, no chalazal'
AT2G37370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.04422'
Avg. expression score in LCM sample: '8.86284'
Tissue used: 'full endosperm'
AT2G37370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.766893'
Avg. embryo expression (LCM): '0'
AT2G37360 ABCG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 7 0 4 2 100.00% 33.33% 7 6 TAIR8 Avg. embryo expression (dissected): '13.074'
Avg. embryo expression (LCM): '27.88'
AT2G37360 ABCG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.31 x 10-4 39 2 2 20 95.12% 90.91% 41 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000117'
Avg. expression score for this sample: '176.67'
Avg. expression score in LCM sample: '8.30432'
Tissue used: 'full endosperm'
AT2G37360 ABCG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37360 ABCG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 2 0 1 5 100.00% 83.33% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000117'
Avg. expression score for this sample: '11.373'
Avg. expression score in LCM sample: '8.30432'
Tissue used: 'pure endosperm, no chalazal'
AT2G37360 ABCG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G37360 ABCG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'