Displaying data sets 105001 - 105100 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G38300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G38300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.11703'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G38300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G38290 AMT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.2113'
Avg. embryo expression (LCM): '18.3355'
AT2G38290 AMT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.377'
Avg. expression score in LCM sample: '8.58358'
Tissue used: 'full endosperm'
AT2G38290 AMT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38290 AMT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38290 AMT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38290 AMT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.2755'
Avg. expression score in LCM sample: '8.58358'
Tissue used: 'pure endosperm, no chalazal'
AT2G38280 FAC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.38433 x 10-1 6 2 1 8 75.00% 88.89% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023249'
Avg. expression score for this sample: '32.7714'
Avg. expression score in LCM sample: '21.4002'
Tissue used: 'pure endosperm, no chalazal'
AT2G38280 FAC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.91695 x 10-1 35 11 76.09% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38280 FAC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8936 x 10-2 16 3 9 40 84.21% 81.63% 19 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023249'
Avg. expression score for this sample: '49.6775'
Avg. expression score in LCM sample: '21.4002'
Tissue used: 'full endosperm'
AT2G38280 FAC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.11392 x 10-1 9 20 0 2 31.03% 100.00% 29 2 TAIR8 Avg. embryo expression (dissected): '93.5937'
Avg. embryo expression (LCM): '96.362'
AT2G38280 FAC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8039 x 10-2 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38280 FAC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.61325 x 10-1 28 12 70.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38270 CXIP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38270 CXIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.38'
Avg. expression score in LCM sample: '26.809'
Tissue used: 'pure endosperm, no chalazal'
AT2G38270 CXIP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38270 CXIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.2896'
Avg. expression score in LCM sample: '26.809'
Tissue used: 'full endosperm'
AT2G38270 CXIP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38270 CXIP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 2 2 33.33% 50.00% 6 4 TAIR8 Avg. embryo expression (dissected): '178.691'
Avg. embryo expression (LCM): '236.666'
AT2G38255 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.567034'
Avg. embryo expression (LCM): '0'
AT2G38255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.43319'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G38255 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38255 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38255 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38255 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G38250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4 x 10-13 76 10 8 152 88.37% 95.00% 86 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '817.008'
Avg. expression score in LCM sample: '16.4176'
Tissue used: 'pure endosperm, no chalazal'
AT2G38250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-5 2547 132 95.07% 2679 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 437 17 23 1507 96.26% 98.50% 454 1530 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1662.9'
Avg. expression score in LCM sample: '16.4176'
Tissue used: 'full endosperm'
AT2G38250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.865 x 10-2 4 0 1 7 100.00% 87.50% 4 8 TAIR8 Avg. embryo expression (dissected): '97.6912'
Avg. embryo expression (LCM): '1.40656'
AT2G38250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.1 x 10-5 51 9 85.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-4 2887 34 98.84% 2921 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G38240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.39654'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G38240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '.941893'
AT2G38230 PDX1.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6074 x 10-2 4251 3949 641 673 51.84% 51.22% 8200 1314 TAIR8 Avg. embryo expression (dissected): '6317.15'
Avg. embryo expression (LCM): '1440.9'
AT2G38230 PDX1.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0234 1308 714 592 1026 64.69% 63.41% 2022 1618 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000064'
Avg. expression score for this sample: '1314.79'
Avg. expression score in LCM sample: '1186.18'
Tissue used: 'full endosperm'
AT2G38230 PDX1.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.97761 x 10-1 115 67 63.19% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38230 PDX1.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 2298 1017 69.32% 3315 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38230 PDX1.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.74523 x 10-1 512 297 63.29% 809 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38230 PDX1.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.23 x 10-4 5310 2901 1353 2464 64.67% 64.55% 8211 3817 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000064'
Avg. expression score for this sample: '5356.08'
Avg. expression score in LCM sample: '1186.18'
Tissue used: 'pure endosperm, no chalazal'
AT2G38220 APD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.91355 x 10-1 4 9 2 4 30.77% 66.67% 13 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340963'
Avg. expression score for this sample: '7.05227'
Avg. expression score in LCM sample: '11.9788'
Tissue used: 'pure endosperm, no chalazal'
AT2G38220 APD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-7 10 92 9.80% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38220 APD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 5 1 7 50.00% 87.50% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340963'
Avg. expression score for this sample: '3.16213'
Avg. expression score in LCM sample: '11.9788'
Tissue used: 'full endosperm'
AT2G38220 APD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G38220 APD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38220 APD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-10 140 4 97.22% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38210 PDX1L4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38210 PDX1L4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '150.939'
Avg. expression score in LCM sample: '43.3588'
Tissue used: 'pure endosperm, no chalazal'
AT2G38210 PDX1L4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38210 PDX1L4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.9837'
Avg. expression score in LCM sample: '43.3588'
Tissue used: 'full endosperm'
AT2G38210 PDX1L4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38210 PDX1L4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '196.832'
Avg. embryo expression (LCM): '42.5987'
AT2G38195 APD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.170677'
Avg. embryo expression (LCM): '0'
AT2G38195 APD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.64945'
Avg. expression score in LCM sample: '7.7752'
Tissue used: 'full endosperm'
AT2G38195 APD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38195 APD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5714 x 10-2 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38195 APD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38195 APD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.05192'
Avg. expression score in LCM sample: '7.7752'
Tissue used: 'pure endosperm, no chalazal'
AT2G38185 APD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6685 x 10-2 90 75 72 121 54.55% 62.69% 165 193 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681505'
Avg. expression score for this sample: '244.647'
Avg. expression score in LCM sample: '70.403'
Tissue used: 'pure endosperm, no chalazal'
AT2G38185 APD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-29 464 47 90.80% 511 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38185 APD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.36176 x 10-1 171 80 141 325 68.13% 69.74% 251 466 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681505'
Avg. expression score for this sample: '241.785'
Avg. expression score in LCM sample: '70.403'
Tissue used: 'full endosperm'
AT2G38185 APD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.80195 x 10-1 31 27 15 15 53.45% 50.00% 58 30 TAIR8 Avg. embryo expression (dissected): '131.826'
Avg. embryo expression (LCM): '50.7994'
AT2G38185 APD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.86772 x 10-1 27 9 75.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38185 APD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.82 x 10-4 568 202 73.77% 770 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.1137'
Avg. expression score in LCM sample: '5.07078'
Tissue used: 'pure endosperm, no chalazal'
AT2G38180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '84.7865'
Avg. expression score in LCM sample: '5.07078'
Tissue used: 'full endosperm'
AT2G38180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '89.8244'
Avg. embryo expression (LCM): '36.7841'
AT2G38170 CAX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1598 x 10-2 48 18 7 9 72.73% 56.25% 66 16 TAIR8 Avg. embryo expression (dissected): '95.7528'
Avg. embryo expression (LCM): '13.7391'
AT2G38170 CAX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-23 137 3 2 112 97.86% 98.25% 140 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-30'
Avg. expression score for this sample: '166.864'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'full endosperm'
AT2G38170 CAX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 33 1 97.06% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38170 CAX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2920 94 96.88% 3014 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38170 CAX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 764 397 65.81% 1161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38170 CAX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.6 x 10-8 69 5 1 44 93.24% 97.78% 74 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-30'
Avg. expression score for this sample: '86.7369'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'pure endosperm, no chalazal'
AT2G38160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.23765 x 10-1 33 25 21 75 56.90% 78.12% 58 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.76241'
Avg. expression score for this sample: '66.1392'
Avg. expression score in LCM sample: '80.1183'
Tissue used: 'pure endosperm, no chalazal'
AT2G38160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.15587 x 10-1 15 8 65.22% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.58804 x 10-1 16 13 12 29 55.17% 70.73% 29 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.76241'
Avg. expression score for this sample: '35.7864'
Avg. expression score in LCM sample: '80.1183'
Tissue used: 'full endosperm'
AT2G38160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.72851 x 10-1 47 94 19 42 33.33% 68.85% 141 61 TAIR8 Avg. embryo expression (dissected): '154.472'
Avg. embryo expression (LCM): '227.737'
AT2G38160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.80935 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.47822'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'pure endosperm, no chalazal'
AT2G38150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.869327'
Avg. expression score in LCM sample: '1.20523'
Tissue used: 'full endosperm'
AT2G38150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '6.19033'
Avg. embryo expression (LCM): '3.10197'
AT2G38140 PSRP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '360.746'
Avg. embryo expression (LCM): '237.118'
AT2G38140 PSRP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '84.0682'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'full endosperm'
AT2G38140 PSRP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38140 PSRP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'