Displaying data sets 104501 - 104600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G39100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40071 x 10-1 9 3 1 1 75.00% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '79.1852'
Avg. embryo expression (LCM): '49.4682'
AT2G39100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.63967 x 10-1 8 10 4 4 44.44% 50.00% 18 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '97.9686'
Avg. expression score in LCM sample: '12.2434'
Tissue used: 'pure endosperm, no chalazal'
AT2G39090 APC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23458 x 10-1 28 25 31 58 52.83% 65.17% 53 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.859278'
Avg. expression score for this sample: '122.353'
Avg. expression score in LCM sample: '31.7328'
Tissue used: 'pure endosperm, no chalazal'
AT2G39090 APC7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.95731 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39090 APC7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-6 101 12 89.38% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39090 APC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.26777 x 10-1 45 23 14 65 66.18% 82.28% 68 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.859278'
Avg. expression score for this sample: '96.5854'
Avg. expression score in LCM sample: '31.7328'
Tissue used: 'full endosperm'
AT2G39090 APC7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.18559 x 10-1 59 50 23 20 54.13% 46.51% 109 43 TAIR8 Avg. embryo expression (dissected): '206.085'
Avg. embryo expression (LCM): '116.82'
AT2G39090 APC7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.4 x 10-5 79 10 88.76% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39080 EMB2799 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-9 149 4 97.39% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39080 EMB2799 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.46923 x 10-1 53 68 7 10 43.80% 58.82% 121 17 TAIR8 Avg. embryo expression (dissected): '108.263'
Avg. embryo expression (LCM): '101.75'
AT2G39080 EMB2799 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 10 7 21 52.38% 75.00% 21 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001513'
Avg. expression score for this sample: '33.083'
Avg. expression score in LCM sample: '11.3468'
Tissue used: 'pure endosperm, no chalazal'
AT2G39080 EMB2799 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.67 x 10-4 44 24 30 176 64.71% 85.44% 68 206 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001513'
Avg. expression score for this sample: '62.8625'
Avg. expression score in LCM sample: '11.3468'
Tissue used: 'full endosperm'
AT2G39080 EMB2799 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.26081 x 10-1 82 17 82.83% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39080 EMB2799 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.5486 x 10-2 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39060 SWEET9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39060 SWEET9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39060 SWEET9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.176483'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39060 SWEET9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.9854'
Avg. embryo expression (LCM): '49.0664'
AT2G39060 SWEET9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39060 SWEET9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.62891'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39050 EULS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 4 1 0 3 80.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127386'
Avg. expression score for this sample: '45.9734'
Avg. expression score in LCM sample: '2.32227'
Tissue used: 'pure endosperm, no chalazal'
AT2G39050 EULS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 5 1 0 6 83.33% 100.00% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127386'
Avg. expression score for this sample: '53.037'
Avg. expression score in LCM sample: '2.32227'
Tissue used: 'full endosperm'
AT2G39050 EULS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.97561 x 10-1 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39050 EULS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39050 EULS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.34882 x 10-1 15 7 68.18% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39050 EULS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '9.74156'
Avg. embryo expression (LCM): '2.97638'
AT2G39040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G39040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.297824'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39030 NATA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.885375'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G39030 NATA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39030 NATA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39030 NATA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39030 NATA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.763524'
Avg. embryo expression (LCM): '1.29353'
AT2G39030 NATA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G39020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 32 24 14 41 57.14% 74.55% 56 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.370176'
Avg. expression score for this sample: '369.173'
Avg. expression score in LCM sample: '107.368'
Tissue used: 'pure endosperm, no chalazal'
AT2G39020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.60038 x 10-1 29 13 69.05% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.33 x 10-4 123 22 84.83% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32009 x 10-1 40 17 49 132 70.18% 72.93% 57 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.370176'
Avg. expression score for this sample: '325.231'
Avg. expression score in LCM sample: '107.368'
Tissue used: 'full endosperm'
AT2G39020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.37867 x 10-1 53 39 14 13 57.61% 48.15% 92 27 TAIR8 Avg. embryo expression (dissected): '693.821'
Avg. embryo expression (LCM): '686.816'
AT2G39020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.10424 x 10-1 89 39 69.53% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39010 PIP2E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.55331 x 10-1 43 0 100.00% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39010 PIP2E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.5536 x 10-1 10 20 9 12 33.33% 57.14% 30 21 TAIR8 Avg. embryo expression (dissected): '70.5316'
Avg. embryo expression (LCM): '5.06111'
AT2G39010 PIP2E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.4778 x 10-2 9 0 1 12 100.00% 92.31% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000068'
Avg. expression score for this sample: '21.6235'
Avg. expression score in LCM sample: '5.92326'
Tissue used: 'pure endosperm, no chalazal'
AT2G39010 PIP2E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.607 x 10-3 18 4 0 28 81.82% 100.00% 22 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000068'
Avg. expression score for this sample: '70.4176'
Avg. expression score in LCM sample: '5.92326'
Tissue used: 'full endosperm'
AT2G39010 PIP2E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.59868 x 10-1 39 0 100.00% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39010 PIP2E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.81598 x 10-1 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-5 85 4 95.51% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.795 x 10-3 95 19 29 90 83.33% 75.63% 114 119 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007659'
Avg. expression score for this sample: '193.862'
Avg. expression score in LCM sample: '52.0306'
Tissue used: 'full endosperm'
AT2G39000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.9875 x 10-2 34 14 4 7 70.83% 63.64% 48 11 TAIR8 Avg. embryo expression (dissected): '125.08'
Avg. embryo expression (LCM): '69.1475'
AT2G39000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.295 46 9 83.64% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G39000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.39449 x 10-1 33 13 12 22 71.74% 64.71% 46 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007659'
Avg. expression score for this sample: '148.226'
Avg. expression score in LCM sample: '52.0306'
Tissue used: 'pure endosperm, no chalazal'
AT2G38995 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G38995 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.233257'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G38995 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38995 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38995 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38995 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G38970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '66.2425'
Avg. embryo expression (LCM): '73.4049'
AT2G38970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.0816'
Avg. expression score in LCM sample: '17.9902'
Tissue used: 'pure endosperm, no chalazal'
AT2G38970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.39024 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 5 7 15 61.54% 68.18% 13 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '47.357'
Avg. expression score in LCM sample: '17.9902'
Tissue used: 'full endosperm'
AT2G38960 ERO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '115.02'
Avg. expression score in LCM sample: '74.3715'
Tissue used: 'full endosperm'
AT2G38960 ERO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38960 ERO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38960 ERO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38960 ERO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '87.1988'
Avg. embryo expression (LCM): '101.825'
AT2G38960 ERO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '86.8513'
Avg. expression score in LCM sample: '74.3715'
Tissue used: 'pure endosperm, no chalazal'
AT2G38950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 19 5 14 19 79.17% 57.58% 24 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266867'
Avg. expression score for this sample: '52.5957'
Avg. expression score in LCM sample: '40.4046'
Tissue used: 'pure endosperm, no chalazal'
AT2G38950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.18326 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.73 x 10-4 161 24 87.03% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.97015 x 10-1 56 11 35 71 83.58% 66.98% 67 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266867'
Avg. expression score for this sample: '98.4857'
Avg. expression score in LCM sample: '40.4046'
Tissue used: 'full endosperm'
AT2G38950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21257 x 10-1 17 7 5 4 70.83% 44.44% 24 9 TAIR8 Avg. embryo expression (dissected): '57.7003'
Avg. embryo expression (LCM): '69.0345'
AT2G38950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3352 x 10-1 111 48 69.81% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38940 PHT1;4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38940 PHT1;4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.18073'
Avg. embryo expression (LCM): '0'
AT2G38940 PHT1;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G38940 PHT1;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.18107'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G38940 PHT1;4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38940 PHT1;4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.71077 x 10-1 17 7 70.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.51528 x 10-1 40 16 37 45 71.43% 54.88% 56 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100064'
Avg. expression score for this sample: '92.7482'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'full endosperm'
AT2G38920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.69171'
Avg. embryo expression (LCM): '9.20544'
AT2G38920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.7874 x 10-2 6 10 12 11 37.50% 47.83% 16 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100064'
Avg. expression score for this sample: '31.5615'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'pure endosperm, no chalazal'
AT2G38910 CPK20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.149286'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G38910 CPK20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.598378'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G38910 CPK20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38910 CPK20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38910 CPK20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G38910 CPK20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G38905 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '31.8937'
Avg. embryo expression (LCM): '0'
AT2G38905 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'